RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 IL20RAQ9UHF4 553 aa10.73□□□□□ -0.69
RNF40-208ENST00000565995 ZNF229Q9UJW7 825 aa10.73□□□□□ -0.69
RNF40-208ENST00000565995 ANGPT4Q9Y264 503 aa10.73□□□□□ -0.69
RNF40-208ENST00000565995 ANKRD65E5RJM6 399 aa10.72□□□□□ -0.69
RNF40-208ENST00000565995 SERPINB7O75635 380 aa10.72□□□□□ -0.69
RNF40-208ENST00000565995 THY1P04216 161 aa10.72□□□□□ -0.69
RNF40-208ENST00000565995 SBK2P0C263 348 aa10.72□□□□□ -0.69
RNF40-208ENST00000565995 MELKQ14680 651 aa10.72□□□□□ -0.69
RNF40-208ENST00000565995 ZMAT1Q5H9K5 638 aa10.72□□□□□ -0.69
RNF40-208ENST00000565995 FAM205BPQ63HN1 556 aa10.72□□□□□ -0.69
RNF40-208ENST00000565995 ERICH5Q6P6B1 374 aa10.72□□□□□ -0.69
RNF40-208ENST00000565995 RHOUQ7L0Q8 258 aa10.72□□□□□ -0.69
RNF40-208ENST00000565995 MICU2Q8IYU8 434 aa10.72□□□□□ -0.69
RNF40-208ENST00000565995 LRRC18Q8N456 261 aa10.72□□□□□ -0.69
RNF40-208ENST00000565995 C11orf65Q8NCR3 313 aa10.72□□□□□ -0.69
RNF40-208ENST00000565995 ICA1LQ8NDH6 482 aa10.72□□□□□ -0.69
RNF40-208ENST00000565995 OR52E2Q8NGJ4 325 aa10.72□□□□□ -0.69
RNF40-208ENST00000565995 GEMIN6Q8WXD5 167 aaKnown RBP10.72□□□□□ -0.69
RNF40-208ENST00000565995 NABP1Q96AH0 204 aa10.72□□□□□ -0.69
RNF40-208ENST00000565995 NMD3Q96D46 503 aaKnown RBP10.72□□□□□ -0.69
RNF40-208ENST00000565995 ZNF347Q96SE7 839 aa10.72□□□□□ -0.69
RNF40-208ENST00000565995 ZNF607Q96SK3 696 aa10.72□□□□□ -0.69
RNF40-208ENST00000565995 ARHGDIGQ99819 225 aa10.72□□□□□ -0.69
RNF40-208ENST00000565995 MMP27Q9H306 513 aa10.72□□□□□ -0.69
RNF40-208ENST00000565995 MMADHCQ9H3L0 296 aaPredicted RBP10.72□□□□□ -0.69
RNF40-208ENST00000565995 SMURF2Q9HAU4 748 aa10.72□□□□□ -0.69
RNF40-208ENST00000565995 TMEM106BQ9NUM4 274 aa10.72□□□□□ -0.69
RNF40-208ENST00000565995 DCAF16Q9NXF7 216 aa10.72□□□□□ -0.69
RNF40-208ENST00000565995 GMPR2Q9P2T1 348 aaKnown RBP10.72□□□□□ -0.69
RNF40-208ENST00000565995 LRCH1Q9Y2L9 728 aa10.72□□□□□ -0.69
RNF40-208ENST00000565995 UGT2A1Q9Y4X1 527 aa10.72□□□□□ -0.69
RNF40-208ENST00000565995 ELOVL7A1L3X0 281 aa10.71□□□□□ -0.69
RNF40-208ENST00000565995 NDUFA7O95182 113 aa10.71□□□□□ -0.69
RNF40-208ENST00000565995 CH25HO95992 272 aa10.71□□□□□ -0.69
RNF40-208ENST00000565995 WNT2P09544 360 aa10.71□□□□□ -0.69
RNF40-208ENST00000565995 TSPAN19P0C672 248 aa10.71□□□□□ -0.69
RNF40-208ENST00000565995 IGHV4-38-2P0DP08 117 aa10.71□□□□□ -0.69
RNF40-208ENST00000565995 HSD17B1P14061 328 aa10.71□□□□□ -0.69
RNF40-208ENST00000565995 ZNF32P17041 273 aa10.71□□□□□ -0.69
RNF40-208ENST00000565995 TNFRSF1AP19438 455 aa10.71□□□□□ -0.69
RNF40-208ENST00000565995 TUBG1P23258 451 aa10.71□□□□□ -0.69
RNF40-208ENST00000565995 AQP1P29972 269 aa10.71□□□□□ -0.69
RNF40-208ENST00000565995 MSX2P35548 267 aaPredicted RBP10.71□□□□□ -0.69
RNF40-208ENST00000565995 CLRN1P58418 232 aa10.71□□□□□ -0.69
RNF40-208ENST00000565995 BTG1P62324 171 aa10.71□□□□□ -0.69
RNF40-208ENST00000565995 PSG4Q00888 419 aa10.71□□□□□ -0.69
RNF40-208ENST00000565995 HSF2Q03933 536 aa10.71□□□□□ -0.69
RNF40-208ENST00000565995 SCARB2Q14108 478 aa10.71□□□□□ -0.69
RNF40-208ENST00000565995 VMACQ2NL98 169 aa10.71□□□□□ -0.69
RNF40-208ENST00000565995 SPATS1Q496A3 300 aa10.71□□□□□ -0.69
RNF40-208ENST00000565995 FAM27BQ5VT28 67 aa10.71□□□□□ -0.69
RNF40-208ENST00000565995 LRRN1Q6UXK5 716 aa10.71□□□□□ -0.69
RNF40-208ENST00000565995 ARMC8Q8IUR7 673 aa10.71□□□□□ -0.69
RNF40-208ENST00000565995 PARP8Q8N3A8 854 aa10.71□□□□□ -0.69
RNF40-208ENST00000565995 NOXO1Q8NFA2 376 aa10.71□□□□□ -0.69
RNF40-208ENST00000565995 ASB10Q8WXI3 467 aa10.71□□□□□ -0.69
RNF40-208ENST00000565995 TAF15Q92804 592 aaKnown RBP eCLIP10.71□□□□□ -0.69
RNF40-208ENST00000565995 FAM162AQ96A26 154 aa10.71□□□□□ -0.69
RNF40-208ENST00000565995 ZNF583Q96ND8 569 aa10.71□□□□□ -0.69
RNF40-208ENST00000565995 MCHR1Q99705 422 aa10.71□□□□□ -0.69
RNF40-208ENST00000565995 PCDHAC1Q9H158 963 aa10.71□□□□□ -0.69
RNF40-208ENST00000565995 KCNN2Q9H2S1 579 aa10.71□□□□□ -0.69
RNF40-208ENST00000565995 BEX1Q9HBH7 125 aa10.71□□□□□ -0.69
RNF40-208ENST00000565995 TUBG2Q9NRH3 451 aa10.71□□□□□ -0.69
RNF40-208ENST00000565995 TET2Q6N021 2002 aaPredicted RBP10.7□□□□□ -0.7
RNF40-208ENST00000565995 C5orf49A4QMS7 147 aa10.7□□□□□ -0.7
RNF40-208ENST00000565995 NPIPB13A6NJU9 1138 aa10.7□□□□□ -0.7
RNF40-208ENST00000565995 SRRM5B3KS81 715 aa10.7□□□□□ -0.7
RNF40-208ENST00000565995 NPIPB4C9JG80 1138 aa10.7□□□□□ -0.7
RNF40-208ENST00000565995 TRMUO75648 421 aaKnown RBP10.7□□□□□ -0.7
RNF40-208ENST00000565995 FSTL3O95633 263 aa10.7□□□□□ -0.7
RNF40-208ENST00000565995 KNG1P01042 644 aa10.7□□□□□ -0.7
RNF40-208ENST00000565995 NGFP01138 241 aa10.7□□□□□ -0.7
RNF40-208ENST00000565995 IGF2P01344 180 aa10.7□□□□□ -0.7
RNF40-208ENST00000565995 ACADSP16219 412 aa10.7□□□□□ -0.7
RNF40-208ENST00000565995 NCK1P16333 377 aa10.7□□□□□ -0.7
RNF40-208ENST00000565995 CCNOP22674 350 aa10.7□□□□□ -0.7
RNF40-208ENST00000565995 PCGF2P35227 344 aa10.7□□□□□ -0.7
RNF40-208ENST00000565995 GDI2P50395 445 aaKnown RBP10.7□□□□□ -0.7
RNF40-208ENST00000565995 UGT2B15P54855 530 aa10.7□□□□□ -0.7
RNF40-208ENST00000565995 PCBP3P57721 371 aaKnown RBP10.7□□□□□ -0.7
RNF40-208ENST00000565995 BPIFB3P59826 476 aa10.7□□□□□ -0.7
RNF40-208ENST00000565995 PPP1CBP62140 327 aa10.7□□□□□ -0.7
RNF40-208ENST00000565995 TNFAIP6P98066 277 aaPredicted RBP10.7□□□□□ -0.7
RNF40-208ENST00000565995 SRSF4Q08170 494 aaKnown RBP10.7□□□□□ -0.7
RNF40-208ENST00000565995 PSG7Q13046 419 aa10.7□□□□□ -0.7
RNF40-208ENST00000565995 ZMYND11Q15326 602 aa10.7□□□□□ -0.7
RNF40-208ENST00000565995 NPTX1Q15818 432 aa10.7□□□□□ -0.7
RNF40-208ENST00000565995 DUSP7Q16829 419 aa10.7□□□□□ -0.7
RNF40-208ENST00000565995 LRRC23Q53EV4 343 aaPredicted RBP10.7□□□□□ -0.7
RNF40-208ENST00000565995 MTX3Q5HYI7 312 aa10.7□□□□□ -0.7
RNF40-208ENST00000565995 ENTPD8Q5MY95 495 aa10.7□□□□□ -0.7
RNF40-208ENST00000565995 SPATA46Q5T0L3 261 aa10.7□□□□□ -0.7
RNF40-208ENST00000565995 INTS11Q5TA45 600 aaKnown RBP10.7□□□□□ -0.7
RNF40-208ENST00000565995 C1orf146Q5VVC0 180 aa10.7□□□□□ -0.7
RNF40-208ENST00000565995 ZNF774Q6NX45 483 aa10.7□□□□□ -0.7
RNF40-208ENST00000565995 TTC33Q6PID6 262 aaPredicted RBP10.7□□□□□ -0.7
RNF40-208ENST00000565995 HDDC2Q7Z4H3 204 aa10.7□□□□□ -0.7
RNF40-208ENST00000565995 ZER1Q7Z7L7 766 aa10.7□□□□□ -0.7
RNF40-208ENST00000565995 CALHM3Q86XJ0 350 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms