RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 MED18Q9BUE0 208 aa6.81□□□□□ -1.32
CDH1-208ENST00000565810 CCDC90BQ9GZT6 254 aa6.81□□□□□ -1.32
CDH1-208ENST00000565810 FGF20Q9NP95 211 aaPredicted RBP6.81□□□□□ -1.32
CDH1-208ENST00000565810 NGBQ9NPG2 151 aa6.81□□□□□ -1.32
CDH1-208ENST00000565810 INPP5EQ9NRR6 644 aa6.81□□□□□ -1.32
CDH1-208ENST00000565810 CENPMQ9NSP4 180 aa6.81□□□□□ -1.32
CDH1-208ENST00000565810 PLEK2Q9NYT0 353 aa6.81□□□□□ -1.32
CDH1-208ENST00000565810 GDF2Q9UK05 429 aaPredicted RBP6.81□□□□□ -1.32
CDH1-208ENST00000565810 EXOSC1Q9Y3B2 195 aaKnown RBP6.81□□□□□ -1.32
CDH1-208ENST00000565810 NBASA2RRP1 2371 aa6.81□□□□□ -1.32
CDH1-208ENST00000565810 A0A1W2PR80 420 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 WIPF3A6NGB9 483 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 TUBAL3A6NHL2 446 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 RER1O15258 196 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 SGCEO43556 437 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 RGS10O43665 173 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 MRPS14O60783 128 aaKnown RBP6.8□□□□□ -1.32
CDH1-208ENST00000565810 TNFAIP8O95379 198 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 CDK1P06493 297 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 TACSTD2P09758 323 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 H2BFMP0C1H6 154 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 PATE4P0C8F1 98 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 CBR1P16152 277 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 ALOX5APP20292 161 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 CRHBPP24387 322 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 APLNRP35414 380 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 RPS27P42677 84 aaKnown RBP6.8□□□□□ -1.32
CDH1-208ENST00000565810 HCCSP53701 268 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 TUBA1BP68363 451 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 TUBA4AP68366 448 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 PSG4Q00888 419 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 EGR3Q06889 387 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 ECH1Q13011 328 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 RAB35Q15286 201 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 CDSNQ15517 529 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 TAB1Q15750 504 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 PABPC1L2AQ5JQF8 200 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 ELFN2Q5R3F8 820 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 LAIR2Q6ISS4 152 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 CORO6Q6QEF8 472 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 ZNF322Q6U7Q0 402 aaPredicted RBP6.8□□□□□ -1.32
CDH1-208ENST00000565810 TMPRSS11AQ6ZMR5 421 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 TUBA1AQ71U36 451 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 RHOUQ7L0Q8 258 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 KCTD20Q7Z5Y7 419 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 KRT77Q7Z794 578 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 ALPK2Q86TB3 2170 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 MDP1Q86V88 176 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.8□□□□□ -1.32
CDH1-208ENST00000565810 FAM169BQ8N8A8 192 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 WDR31Q8NA23 367 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 IL17RDQ8NFM7 739 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 OR1J2Q8NGS2 313 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 AKR7LQ8NHP1 331 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 SNX33Q8WV41 574 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 SPTSSAQ969W0 71 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 NR1H4Q96RI1 486 aaPredicted RBP6.8□□□□□ -1.32
CDH1-208ENST00000565810 TBX5Q99593 518 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 ABHD6Q9BV23 337 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 MROQ9BYG7 248 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 OR2H1Q9GZK4 316 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 HDHD2Q9H0R4 259 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 DUSP21Q9H596 190 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 SLC24A3Q9HC58 644 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 IKZF2Q9UKS7 526 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 DIMT1Q9UNQ2 313 aaKnown RBP6.8□□□□□ -1.32
CDH1-208ENST00000565810 ERGIC3Q9Y282 383 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 PCDHGB5Q9Y5G0 923 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 KLF2Q9Y5W3 355 aaPredicted RBP6.8□□□□□ -1.32
CDH1-208ENST00000565810 SNX5Q9Y5X3 404 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 SLC25A15Q9Y619 301 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 LHFPL6Q9Y693 200 aa6.8□□□□□ -1.32
CDH1-208ENST00000565810 KIAA1549Q9HCM3 1950 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 A0A1W2PQL4 384 aaPredicted RBP6.79□□□□□ -1.32
CDH1-208ENST00000565810 OR6C6A6NF89 314 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 ZNF878C9JN71 531 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 J3QRE1 110 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 MYL12BO14950 172 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 DOK2O60496 412 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 ZNF254O75437 659 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 IGHA1P01876 353 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 APOC1P02654 83 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 SERPINA5P05154 406 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 KRT8P05787 483 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 MMP7P09237 267 aaPredicted RBP6.79□□□□□ -1.32
CDH1-208ENST00000565810 COX5BP10606 129 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 CCNOP22674 350 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 HSD11B1P28845 292 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 C21orf33P30042 268 aaPredicted RBP6.79□□□□□ -1.32
CDH1-208ENST00000565810 KIR2DL3P43628 341 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 HTR5AP47898 357 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 GDI2P50395 445 aaKnown RBP6.79□□□□□ -1.32
CDH1-208ENST00000565810 IDH3GP51553 393 aaPredicted RBP6.79□□□□□ -1.32
CDH1-208ENST00000565810 RIDAP52758 137 aaKnown RBP6.79□□□□□ -1.32
CDH1-208ENST00000565810 GABARAPL2P60520 117 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 ACTA2P62736 377 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 GRB2P62993 217 aaKnown RBP6.79□□□□□ -1.32
CDH1-208ENST00000565810 ACTG2P63267 376 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 SLC35A2P78381 396 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 TFF3Q07654 80 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms