RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 MRPL48Q96GC5 212 aaKnown RBP9.74□□□□□ -0.85
SF3B3-205ENST00000564899 ZNF649Q9BS31 505 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 SFXN3Q9BWM7 321 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 CDADC1Q9BWV3 514 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 TTTY10Q9BZA0 68 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 LAMP5Q9UJQ1 280 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 KLHDC2Q9Y2U9 406 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 TMEM14AQ9Y6G1 99 aa9.74□□□□□ -0.85
SF3B3-205ENST00000564899 ZNF99A8MXY4 864 aaPredicted RBP9.73□□□□□ -0.85
SF3B3-205ENST00000564899 E9PLN8 166 aa9.73□□□□□ -0.85
SF3B3-205ENST00000564899 C19orf84I3L1E1 186 aa9.73□□□□□ -0.85
SF3B3-205ENST00000564899 PHYHO14832 338 aa9.73□□□□□ -0.85
SF3B3-205ENST00000564899 TMCC2O75069 709 aa9.73□□□□□ -0.85
SF3B3-205ENST00000564899 TFAP2AP05549 437 aa9.73□□□□□ -0.85
SF3B3-205ENST00000564899 LCKP06239 509 aa9.73□□□□□ -0.85
SF3B3-205ENST00000564899 B4GALT1P15291 398 aa9.73□□□□□ -0.85
SF3B3-205ENST00000564899 ALOX5APP20292 161 aa9.73□□□□□ -0.85
SF3B3-205ENST00000564899 CTSSP25774 331 aa9.73□□□□□ -0.85
SF3B3-205ENST00000564899 MPGP29372 298 aa9.73□□□□□ -0.85
SF3B3-205ENST00000564899 RPL5P46777 297 aaKnown RBP9.73□□□□□ -0.85
SF3B3-205ENST00000564899 FOXG1P55316 489 aaPredicted RBP9.73□□□□□ -0.85
SF3B3-205ENST00000564899 ACTA2P62736 377 aa9.73□□□□□ -0.85
SF3B3-205ENST00000564899 ACTG2P63267 376 aa9.73□□□□□ -0.85
SF3B3-205ENST00000564899 ARF1P84077 181 aaKnown RBP9.73□□□□□ -0.85
SF3B3-205ENST00000564899 PMPCAQ10713 525 aa9.73□□□□□ -0.85
SF3B3-205ENST00000564899 EIF2B1Q14232 305 aaKnown RBP9.73□□□□□ -0.85
SF3B3-205ENST00000564899 PCK2Q16822 640 aa9.73□□□□□ -0.85
SF3B3-205ENST00000564899 KRTAP21-3Q3LHN1 58 aa9.73□□□□□ -0.85
SF3B3-205ENST00000564899 OR2G6Q5TZ20 316 aa9.73□□□□□ -0.85
SF3B3-205ENST00000564899 UBE2UQ5VVX9 321 aa9.73□□□□□ -0.85
SF3B3-205ENST00000564899 XAF1Q6GPH4 301 aa9.73□□□□□ -0.85
SF3B3-205ENST00000564899 ZNF322Q6U7Q0 402 aaPredicted RBP9.73□□□□□ -0.85
SF3B3-205ENST00000564899 TMPRSS11AQ6ZMR5 421 aa9.73□□□□□ -0.85
SF3B3-205ENST00000564899 ZNF813Q6ZN06 617 aa9.73□□□□□ -0.85
SF3B3-205ENST00000564899 BTLAQ7Z6A9 289 aa9.73□□□□□ -0.85
SF3B3-205ENST00000564899 OR2AJ1Q8NGZ0 328 aa9.73□□□□□ -0.85
SF3B3-205ENST00000564899 OR52N1Q8NH53 320 aa9.73□□□□□ -0.85
SF3B3-205ENST00000564899 THEM6Q8WUY1 208 aa9.73□□□□□ -0.85
SF3B3-205ENST00000564899 MUL1Q969V5 352 aa9.73□□□□□ -0.85
SF3B3-205ENST00000564899 STARD4Q96DR4 205 aa9.73□□□□□ -0.85
SF3B3-205ENST00000564899 MYCBPQ99417 103 aaPredicted RBP9.73□□□□□ -0.85
SF3B3-205ENST00000564899 VKORC1Q9BQB6 163 aa9.73□□□□□ -0.85
SF3B3-205ENST00000564899 ZNF416Q9BWM5 594 aa9.73□□□□□ -0.85
SF3B3-205ENST00000564899 SIAEQ9HAT2 523 aa9.73□□□□□ -0.85
SF3B3-205ENST00000564899 CAB39Q9Y376 341 aaPredicted RBP9.73□□□□□ -0.85
SF3B3-205ENST00000564899 HSPB2A8KAH6 182 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 INMTO95050 263 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 FARS2O95363 451 aaKnown RBP9.72□□□□□ -0.85
SF3B3-205ENST00000564899 CNOT4O95628 575 aaKnown RBP9.72□□□□□ -0.85
SF3B3-205ENST00000564899 CGAP01215 116 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 OR8G3PP0DMU2 310 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 JUNBP17275 347 aaPredicted RBP9.72□□□□□ -0.85
SF3B3-205ENST00000564899 PSMB9P28065 219 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 OPRM1P35372 400 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 CD79BP40259 229 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 CA7P43166 264 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 ALDH3B2P48448 385 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 SH3BGRP55822 239 aaPredicted RBP9.72□□□□□ -0.85
SF3B3-205ENST00000564899 WNT4P56705 351 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 LSM6P62312 80 aaKnown RBP9.72□□□□□ -0.85
SF3B3-205ENST00000564899 ENDOGQ14249 297 aaKnown RBP9.72□□□□□ -0.85
SF3B3-205ENST00000564899 SPHARQ15513 63 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 MED22Q15528 200 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 HSPB2Q16082 182 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 NRN1LQ496H8 165 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 CDONQ4KMG0 1287 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 TP53I3Q53FA7 332 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 FAM27BQ5VT28 67 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 TMEM211Q6ICI0 200 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 CORO6Q6QEF8 472 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 KLHL24Q6TFL4 600 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 Q6ZT83 130 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 NCCRP1Q6ZVX7 275 aaPredicted RBP9.72□□□□□ -0.85
SF3B3-205ENST00000564899 DCXRQ7Z4W1 244 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 LRRC18Q8N456 261 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 SLC22A24Q8N4F4 322 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 OR52N5Q8NH56 324 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 SNX33Q8WV41 574 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 SPRYD4Q8WW59 207 aaPredicted RBP9.72□□□□□ -0.85
SF3B3-205ENST00000564899 ASB17Q8WXJ9 295 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 C4orf36Q96KX1 117 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 OR5M11Q96RB7 305 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 AMELYQ99218 206 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 ABHD6Q9BV23 337 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 OPN3Q9H1Y3 402 aaPredicted RBP9.72□□□□□ -0.85
SF3B3-205ENST00000564899 PLSCR4Q9NRQ2 329 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 ASH2LQ9UBL3 628 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 CYB5R1Q9UHQ9 305 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 IKZF2Q9UKS7 526 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 MEMO1Q9Y316 297 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 LSM2Q9Y333 95 aaKnown RBP9.72□□□□□ -0.85
SF3B3-205ENST00000564899 LHFPL6Q9Y693 200 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 CACNA1CQ13936 2221 aa9.72□□□□□ -0.85
SF3B3-205ENST00000564899 A0A0G2JNJ9 132 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 PRR32B1ATL7 298 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 J3QLW9 94 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 MAGEB4O15481 346 aaPredicted RBP9.71□□□□□ -0.86
SF3B3-205ENST00000564899 IL18BPO95998 194 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 MT-ND5P03915 603 aa9.71□□□□□ -0.86
SF3B3-205ENST00000564899 KRT8P05787 483 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms