RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 PISDQ9UG56 409 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 KLHDC2Q9Y2U9 406 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 ETV7Q9Y603 341 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 CACNG2Q9Y698 323 aa6.5□□□□□ -1.37
HERPUD1-209ENST00000564678 RALGAPA1Q6GYQ0 2036 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 ADAMTS9Q9P2N4 1935 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 ACOD1A6NK06 481 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 INMT-MINDY4F8WBC2 141 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 CFIP05156 583 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 SYPP08247 313 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 MALP21145 153 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 DPP4P27487 766 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 PTGS2P35354 604 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 MNDAP41218 407 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 RAG2P55895 527 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 RPL11P62913 178 aaKnown RBP6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 MADCAM1Q13477 382 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 MEP1BQ16820 701 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 PCK2Q16822 640 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 TBRG1Q3YBR2 411 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 SLC36A2Q495M3 483 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 PLA1AQ53H76 456 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 ATAD3CQ5T2N8 411 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 PHF19Q5T6S3 580 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 ATPAF1Q5TC12 328 aaPredicted RBP6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 SLC22A10Q63ZE4 541 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 FAM199XQ6PEV8 388 aaPredicted RBP6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 SLC23A3Q6PIS1 610 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 KLHL24Q6TFL4 600 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 C16orf47Q6ZP98 133 aaPredicted RBP6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 ZBTB44Q8NCP5 570 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 ADPRHL1Q8NDY3 354 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 ASB10Q8WXI3 467 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 HSD17B8Q92506 261 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 YIPF5Q969M3 257 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 MCHR2Q969V1 340 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 S100A16Q96FQ6 103 aaKnown RBP6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 ZNF486Q96H40 463 aaPredicted RBP6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 C4orf45Q96LM5 186 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 ELOVL3Q9HB03 270 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 APMAPQ9HDC9 416 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 CHST11Q9NPF2 352 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 MRPL22Q9NWU5 206 aaKnown RBP6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 OCIAD1Q9NX40 245 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 SLCO1C1Q9NYB5 712 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 MED11Q9P086 117 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 KLHL9Q9P2J3 617 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 KCNG2Q9UJ96 466 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 POU2F3Q9UKI9 436 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 RPH3AQ9Y2J0 694 aaPredicted RBP6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 N6AMT1Q9Y5N5 214 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 WIF1Q9Y5W5 379 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 LAMA1P25391 3075 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 CPAMD8Q8IZJ3 1885 aa6.49□□□□□ -1.37
HERPUD1-209ENST00000564678 A0A1W2PNV4 684 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 TRABD2BA6NFA1 517 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 LIPT2A6NK58 231 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 NUDT19A8MXV4 375 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 D6RAR5 112 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 NPIPA5E9PKD4 350 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 TP53I11O14683 189 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 EEF1E1O43324 174 aaKnown RBP6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 LANCL1O43813 399 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 AQP8O94778 261 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 WISP1O95388 367 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 LDOC1O95751 146 aaPredicted RBP6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 ECDO95905 644 aaPredicted RBP6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 DHFRP00374 187 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 PLGP00747 810 aaPredicted RBP6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 CD63P08962 238 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 TFPIP10646 304 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 CTLA4P16410 223 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 PTGDSP41222 190 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 RIDAP52758 137 aaKnown RBP6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 FOXL2P58012 376 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 MC2RQ01718 297 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 TLE3Q04726 772 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 SIGLEC14Q08ET2 396 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 OR7A5Q15622 319 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 EXT1Q16394 746 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 ZFP69Q49AA0 526 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 FAM69BQ5VUD6 431 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 OR5M10Q6IEU7 315 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 C1orf210Q8IVY1 113 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 DND1Q8IYX4 353 aaKnown RBP6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 CMTM4Q8IZR5 234 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 ZNF433Q8N7K0 673 aaPredicted RBP6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 BMPERQ8N8U9 685 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 LGALS14Q8TCE9 139 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 SMIM4Q8WVI0 70 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 DEDD2Q8WXF8 326 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 TMEM106AQ96A25 262 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 UPRTQ96BW1 309 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 C8orf44Q96CB5 159 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 SPACA9Q96E40 222 aaPredicted RBP6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 ARL5BQ96KC2 179 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 GFI1Q99684 422 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 DPAGT1Q9H3H5 408 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 METTL7AQ9H8H3 244 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 PLEKHA1Q9HB21 404 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms