RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 BAIAP2Q9UQB8 552 aa11.52□□□□□ -0.57
CLK3-216ENST00000564468 POMPQ9Y244 141 aa11.52□□□□□ -0.57
CLK3-216ENST00000564468 POLR1DQ9Y2S0 133 aa11.52□□□□□ -0.57
CLK3-216ENST00000564468 U3KQV3 271 aa11.52□□□□□ -0.57
CLK3-216ENST00000564468 IGHV4-30-2A0A087WSY4 118 aa11.51□□□□□ -0.57
CLK3-216ENST00000564468 A0A1W2PPW3 197 aa11.51□□□□□ -0.57
CLK3-216ENST00000564468 ARRDC5A6NEK1 342 aa11.51□□□□□ -0.57
CLK3-216ENST00000564468 SGCEO43556 437 aa11.51□□□□□ -0.57
CLK3-216ENST00000564468 LY6G6DO95868 133 aa11.51□□□□□ -0.57
CLK3-216ENST00000564468 MT-ND5P03915 603 aa11.51□□□□□ -0.57
CLK3-216ENST00000564468 TP53P04637 393 aaPredicted RBP11.51□□□□□ -0.57
CLK3-216ENST00000564468 ADRA2AP08913 450 aa11.51□□□□□ -0.57
CLK3-216ENST00000564468 ZNF250P15622 560 aa11.51□□□□□ -0.57
CLK3-216ENST00000564468 TUBG1P23258 451 aa11.51□□□□□ -0.57
CLK3-216ENST00000564468 GCH1P30793 250 aa11.51□□□□□ -0.57
CLK3-216ENST00000564468 PPP1R8Q12972 351 aaKnown RBP11.51□□□□□ -0.57
CLK3-216ENST00000564468 NKPD1Q17RQ9 610 aa11.51□□□□□ -0.57
CLK3-216ENST00000564468 ZNF718Q3SXZ3 478 aa11.51□□□□□ -0.57
CLK3-216ENST00000564468 ZNF774Q6NX45 483 aa11.51□□□□□ -0.57
CLK3-216ENST00000564468 CD300LDQ6UXZ3 194 aa11.51□□□□□ -0.57
CLK3-216ENST00000564468 ICA1LQ8NDH6 482 aa11.51□□□□□ -0.57
CLK3-216ENST00000564468 OR10G2Q8NGC3 310 aa11.51□□□□□ -0.57
CLK3-216ENST00000564468 OR52E2Q8NGJ4 325 aa11.51□□□□□ -0.57
CLK3-216ENST00000564468 OR1J1Q8NGS3 322 aa11.51□□□□□ -0.57
CLK3-216ENST00000564468 C10orf105Q8TEF2 133 aa11.51□□□□□ -0.57
CLK3-216ENST00000564468 SNX33Q8WV41 574 aa11.51□□□□□ -0.57
CLK3-216ENST00000564468 NMNAT3Q96T66 252 aa11.51□□□□□ -0.57
CLK3-216ENST00000564468 SYT3Q9BQG1 590 aa11.51□□□□□ -0.57
CLK3-216ENST00000564468 PIMREGQ9BSJ6 248 aa11.51□□□□□ -0.57
CLK3-216ENST00000564468 OR51B6Q9H340 312 aa11.51□□□□□ -0.57
CLK3-216ENST00000564468 EGLN3Q9H6Z9 239 aa11.51□□□□□ -0.57
CLK3-216ENST00000564468 SRA1Q9HD15 236 aaKnown RBP11.51□□□□□ -0.57
CLK3-216ENST00000564468 EMC7Q9NPA0 242 aa11.51□□□□□ -0.57
CLK3-216ENST00000564468 TUBG2Q9NRH3 451 aa11.51□□□□□ -0.57
CLK3-216ENST00000564468 PLEK2Q9NYT0 353 aa11.51□□□□□ -0.57
CLK3-216ENST00000564468 IGLV3-9A0A075B6K5 115 aa11.5□□□□□ -0.57
CLK3-216ENST00000564468 LOC100509620A0A075B734 347 aa11.5□□□□□ -0.57
CLK3-216ENST00000564468 TCRBV3S1A0A5B6 114 aa11.5□□□□□ -0.57
CLK3-216ENST00000564468 H3BSA7 217 aa11.5□□□□□ -0.57
CLK3-216ENST00000564468 DOK2O60496 412 aa11.5□□□□□ -0.57
CLK3-216ENST00000564468 ICMTO60725 284 aa11.5□□□□□ -0.57
CLK3-216ENST00000564468 E2F6O75461 281 aa11.5□□□□□ -0.57
CLK3-216ENST00000564468 SCG5P05408 212 aa11.5□□□□□ -0.57
CLK3-216ENST00000564468 HTR5AP47898 357 aa11.5□□□□□ -0.57
CLK3-216ENST00000564468 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.5□□□□□ -0.57
CLK3-216ENST00000564468 CLEC12AQ5QGZ9 265 aa11.5□□□□□ -0.57
CLK3-216ENST00000564468 SLC35F1Q5T1Q4 408 aa11.5□□□□□ -0.57
CLK3-216ENST00000564468 UGT2A3Q6UWM9 527 aa11.5□□□□□ -0.57
CLK3-216ENST00000564468 CXXC5Q7LFL8 322 aaKnown RBP11.5□□□□□ -0.57
CLK3-216ENST00000564468 ZBTB46Q86UZ6 589 aa11.5□□□□□ -0.57
CLK3-216ENST00000564468 PRIMA1Q86XR5 153 aa11.5□□□□□ -0.57
CLK3-216ENST00000564468 SDR9C7Q8NEX9 313 aa11.5□□□□□ -0.57
CLK3-216ENST00000564468 GJC3Q8NFK1 279 aa11.5□□□□□ -0.57
CLK3-216ENST00000564468 OR2T33Q8NG76 320 aa11.5□□□□□ -0.57
CLK3-216ENST00000564468 IPCEF1Q8WWN9 437 aaPredicted RBP11.5□□□□□ -0.57
CLK3-216ENST00000564468 C4orf45Q96LM5 186 aa11.5□□□□□ -0.57
CLK3-216ENST00000564468 COG8Q96MW5 612 aa11.5□□□□□ -0.57
CLK3-216ENST00000564468 FOXN4Q96NZ1 517 aa11.5□□□□□ -0.57
CLK3-216ENST00000564468 TSSK2Q96PF2 358 aa11.5□□□□□ -0.57
CLK3-216ENST00000564468 TSSK6Q9BXA6 273 aa11.5□□□□□ -0.57
CLK3-216ENST00000564468 CADM1Q9BY67 442 aaKnown RBP11.5□□□□□ -0.57
CLK3-216ENST00000564468 ZNF556Q9HAH1 456 aa11.5□□□□□ -0.57
CLK3-216ENST00000564468 RPRD1BQ9NQG5 326 aaKnown RBP11.5□□□□□ -0.57
CLK3-216ENST00000564468 VNN3Q9NY84 501 aa11.5□□□□□ -0.57
CLK3-216ENST00000564468 TAAR3PQ9P1P4 343 aa11.5□□□□□ -0.57
CLK3-216ENST00000564468 ASH2LQ9UBL3 628 aa11.5□□□□□ -0.57
CLK3-216ENST00000564468 ATPIF1Q9UII2 106 aa11.5□□□□□ -0.57
CLK3-216ENST00000564468 KLHL21Q9UJP4 597 aa11.5□□□□□ -0.57
CLK3-216ENST00000564468 ZANQ9Y493 2812 aa11.49□□□□□ -0.57
CLK3-216ENST00000564468 IGLV1-36A0A0B4J1U3 117 aa11.49□□□□□ -0.57
CLK3-216ENST00000564468 KIAA1324LA8MWY0 1029 aaPredicted RBP11.49□□□□□ -0.57
CLK3-216ENST00000564468 BHLHE40O14503 412 aa11.49□□□□□ -0.57
CLK3-216ENST00000564468 FKBP6O75344 327 aa11.49□□□□□ -0.57
CLK3-216ENST00000564468 ABHD16AO95870 558 aa11.49□□□□□ -0.57
CLK3-216ENST00000564468 IFNGP01579 166 aa11.49□□□□□ -0.57
CLK3-216ENST00000564468 HLA-DQA2P01906 255 aa11.49□□□□□ -0.57
CLK3-216ENST00000564468 DAOP14920 347 aa11.49□□□□□ -0.57
CLK3-216ENST00000564468 CBX1P83916 185 aa11.49□□□□□ -0.57
CLK3-216ENST00000564468 LOXL1Q08397 574 aaPredicted RBP11.49□□□□□ -0.57
CLK3-216ENST00000564468 CARTPTQ16568 116 aa11.49□□□□□ -0.57
CLK3-216ENST00000564468 MSMPQ1L6U9 139 aa11.49□□□□□ -0.57
CLK3-216ENST00000564468 TMEM154Q6P9G4 183 aa11.49□□□□□ -0.57
CLK3-216ENST00000564468 VASH1Q7L8A9 365 aaPredicted RBP11.49□□□□□ -0.57
CLK3-216ENST00000564468 LRP11Q86VZ4 500 aa11.49□□□□□ -0.57
CLK3-216ENST00000564468 OR6V1Q8N148 313 aa11.49□□□□□ -0.57
CLK3-216ENST00000564468 LNX2Q8N448 690 aa11.49□□□□□ -0.57
CLK3-216ENST00000564468 PAPD5Q8NDF8 572 aaKnown RBP11.49□□□□□ -0.57
CLK3-216ENST00000564468 NPEPL1Q8NDH3 523 aa11.49□□□□□ -0.57
CLK3-216ENST00000564468 OR2T4Q8NH00 348 aa11.49□□□□□ -0.57
CLK3-216ENST00000564468 TEX47Q8TBZ9 253 aa11.49□□□□□ -0.57
CLK3-216ENST00000564468 UBASH3BQ8TF42 649 aa11.49□□□□□ -0.57
CLK3-216ENST00000564468 DCLRE1CQ96SD1 692 aaKnown RBP11.49□□□□□ -0.57
CLK3-216ENST00000564468 CDADC1Q9BWV3 514 aa11.49□□□□□ -0.57
CLK3-216ENST00000564468 TBCCD1Q9NVR7 557 aa11.49□□□□□ -0.57
CLK3-216ENST00000564468 DNAJB9Q9UBS3 223 aa11.49□□□□□ -0.57
CLK3-216ENST00000564468 KCNG2Q9UJ96 466 aa11.49□□□□□ -0.57
CLK3-216ENST00000564468 FZR1Q9UM11 496 aa11.49□□□□□ -0.57
CLK3-216ENST00000564468 OR6C68A6NDL8 312 aa11.48□□□□□ -0.57
CLK3-216ENST00000564468 OR6C6A6NF89 314 aa11.48□□□□□ -0.57
CLK3-216ENST00000564468 J3QW42 95 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms