RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 NDRG4Q9ULP0 352 aaKnown RBP17.04■□□□□ 0.32
SHCBP1-203ENST00000564272 ATRQ13535 2644 aa17.03■□□□□ 0.32
SHCBP1-203ENST00000564272 SGCEO43556 437 aa17.03■□□□□ 0.32
SHCBP1-203ENST00000564272 ICMTO60725 284 aa17.03■□□□□ 0.32
SHCBP1-203ENST00000564272 CDC14BO60729 498 aa17.03■□□□□ 0.32
SHCBP1-203ENST00000564272 GPANK1O95872 356 aa17.03■□□□□ 0.32
SHCBP1-203ENST00000564272 FAM157CP0CG43 387 aa17.03■□□□□ 0.32
SHCBP1-203ENST00000564272 HTR5AP47898 357 aa17.03■□□□□ 0.32
SHCBP1-203ENST00000564272 MNAT1P51948 309 aa17.03■□□□□ 0.32
SHCBP1-203ENST00000564272 MRPS11P82912 194 aaKnown RBP17.03■□□□□ 0.32
SHCBP1-203ENST00000564272 DBPQ10586 325 aaPredicted RBP17.03■□□□□ 0.32
SHCBP1-203ENST00000564272 AQP6Q13520 282 aa17.03■□□□□ 0.32
SHCBP1-203ENST00000564272 PCGF3Q3KNV8 242 aa17.03■□□□□ 0.32
SHCBP1-203ENST00000564272 MBNL2Q5VZF2 373 aaKnown RBP17.03■□□□□ 0.32
SHCBP1-203ENST00000564272 UNQ6126/PRO20091Q6UXV3 157 aa17.03■□□□□ 0.32
SHCBP1-203ENST00000564272 VASH1Q7L8A9 365 aaPredicted RBP17.03■□□□□ 0.32
SHCBP1-203ENST00000564272 GLB1L2Q8IW92 636 aa17.03■□□□□ 0.32
SHCBP1-203ENST00000564272 KLF14Q8TD94 323 aaPredicted RBP17.03■□□□□ 0.32
SHCBP1-203ENST00000564272 HPS1Q92902 700 aa17.03■□□□□ 0.32
SHCBP1-203ENST00000564272 NSL1Q96IY1 281 aa17.03■□□□□ 0.32
SHCBP1-203ENST00000564272 C4orf45Q96LM5 186 aa17.03■□□□□ 0.32
SHCBP1-203ENST00000564272 TSSK2Q96PF2 358 aa17.03■□□□□ 0.32
SHCBP1-203ENST00000564272 ASH2LQ9UBL3 628 aa17.03■□□□□ 0.32
SHCBP1-203ENST00000564272 LPAR3Q9UBY5 353 aa17.03■□□□□ 0.32
SHCBP1-203ENST00000564272 DNHD1Q96M86 4753 aa17.02■□□□□ 0.32
SHCBP1-203ENST00000564272 DCTN6O00399 190 aa17.02■□□□□ 0.32
SHCBP1-203ENST00000564272 WNT9BO14905 357 aa17.02■□□□□ 0.32
SHCBP1-203ENST00000564272 ABHD16AO95870 558 aa17.02■□□□□ 0.32
SHCBP1-203ENST00000564272 FAM107AO95990 144 aa17.02■□□□□ 0.32
SHCBP1-203ENST00000564272 MT-ND5P03915 603 aa17.02■□□□□ 0.32
SHCBP1-203ENST00000564272 COX5BP10606 129 aa17.02■□□□□ 0.32
SHCBP1-203ENST00000564272 SLC6A6P31641 620 aa17.02■□□□□ 0.32
SHCBP1-203ENST00000564272 MOGQ16653 247 aa17.02■□□□□ 0.32
SHCBP1-203ENST00000564272 TSTQ16762 297 aaKnown RBP17.02■□□□□ 0.32
SHCBP1-203ENST00000564272 RFX4Q33E94 735 aa17.02■□□□□ 0.32
SHCBP1-203ENST00000564272 FAM120AOSQ5T036 256 aa17.02■□□□□ 0.32
SHCBP1-203ENST00000564272 PGBD2Q6P3X8 592 aa17.02■□□□□ 0.32
SHCBP1-203ENST00000564272 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.02■□□□□ 0.32
SHCBP1-203ENST00000564272 CLDND2Q8NHS1 167 aa17.02■□□□□ 0.32
SHCBP1-203ENST00000564272 SAMD8Q96LT4 415 aa17.02■□□□□ 0.32
SHCBP1-203ENST00000564272 WACQ9BTA9 647 aa17.02■□□□□ 0.32
SHCBP1-203ENST00000564272 POFUT1Q9H488 388 aa17.02■□□□□ 0.32
SHCBP1-203ENST00000564272 NKIRAS2Q9NYR9 191 aa17.02■□□□□ 0.32
SHCBP1-203ENST00000564272 ACTR3BQ9P1U1 418 aa17.02■□□□□ 0.32
SHCBP1-203ENST00000564272 TMCC3Q9ULS5 477 aa17.02■□□□□ 0.32
SHCBP1-203ENST00000564272 CUBNO60494 3623 aa17.02■□□□□ 0.31
SHCBP1-203ENST00000564272 ZSCAN5BA6NJL1 495 aa17.01■□□□□ 0.31
SHCBP1-203ENST00000564272 TPD52L2O43399 206 aaKnown RBP17.01■□□□□ 0.31
SHCBP1-203ENST00000564272 PPIHO43447 177 aaKnown RBP17.01■□□□□ 0.31
SHCBP1-203ENST00000564272 SPRY3O43610 288 aa17.01■□□□□ 0.31
SHCBP1-203ENST00000564272 IFNA2P01563 188 aa17.01■□□□□ 0.31
SHCBP1-203ENST00000564272 IGHV1-46P01743 117 aa17.01■□□□□ 0.31
SHCBP1-203ENST00000564272 GSSP48637 474 aa17.01■□□□□ 0.31
SHCBP1-203ENST00000564272 CENPAP49450 140 aa17.01■□□□□ 0.31
SHCBP1-203ENST00000564272 ZNF81P51508 661 aa17.01■□□□□ 0.31
SHCBP1-203ENST00000564272 MMP15P51511 669 aa17.01■□□□□ 0.31
SHCBP1-203ENST00000564272 ARHGDIAP52565 204 aa17.01■□□□□ 0.31
SHCBP1-203ENST00000564272 MEP1BQ16820 701 aa17.01■□□□□ 0.31
SHCBP1-203ENST00000564272 LEG1Q6P5S2 330 aa17.01■□□□□ 0.31
SHCBP1-203ENST00000564272 ZNF620Q6ZNG0 422 aa17.01■□□□□ 0.31
SHCBP1-203ENST00000564272 RINLQ6ZS11 566 aa17.01■□□□□ 0.31
SHCBP1-203ENST00000564272 JAZF1Q86VZ6 243 aa17.01■□□□□ 0.31
SHCBP1-203ENST00000564272 LINC01356Q8N9X3 169 aa17.01■□□□□ 0.31
SHCBP1-203ENST00000564272 CCDC197Q8NCU1 140 aa17.01■□□□□ 0.31
SHCBP1-203ENST00000564272 SLC7A6Q92536 515 aa17.01■□□□□ 0.31
SHCBP1-203ENST00000564272 NMNAT3Q96T66 252 aa17.01■□□□□ 0.31
SHCBP1-203ENST00000564272 IFT27Q9BW83 186 aa17.01■□□□□ 0.31
SHCBP1-203ENST00000564272 ELOVL3Q9HB03 270 aa17.01■□□□□ 0.31
SHCBP1-203ENST00000564272 PLEK2Q9NYT0 353 aa17.01■□□□□ 0.31
SHCBP1-203ENST00000564272 POLR1DQ9Y2S0 133 aa17.01■□□□□ 0.31
SHCBP1-203ENST00000564272 LYVE1Q9Y5Y7 322 aa17.01■□□□□ 0.31
SHCBP1-203ENST00000564272 IGLV1-36A0A0B4J1U3 117 aa17■□□□□ 0.31
SHCBP1-203ENST00000564272 TCRBV5S2A0A599 114 aa17■□□□□ 0.31
SHCBP1-203ENST00000564272 GAAP10253 952 aa17■□□□□ 0.31
SHCBP1-203ENST00000564272 HIST1H1CP16403 213 aaKnown RBP17■□□□□ 0.31
SHCBP1-203ENST00000564272 IFNGR2P38484 337 aa17■□□□□ 0.31
SHCBP1-203ENST00000564272 CDH15P55291 814 aa17■□□□□ 0.31
SHCBP1-203ENST00000564272 TMEM33P57088 247 aa17■□□□□ 0.31
SHCBP1-203ENST00000564272 LSM6P62312 80 aaKnown RBP17■□□□□ 0.31
SHCBP1-203ENST00000564272 CCDC92Q53HC0 331 aaPredicted RBP17■□□□□ 0.31
SHCBP1-203ENST00000564272 C1orf94Q6P1W5 598 aa17■□□□□ 0.31
SHCBP1-203ENST00000564272 ARL9Q6T311 187 aa17■□□□□ 0.31
SHCBP1-203ENST00000564272 USP51Q70EK9 711 aa17■□□□□ 0.31
SHCBP1-203ENST00000564272 OR9Q2Q8NGE9 314 aa17■□□□□ 0.31
SHCBP1-203ENST00000564272 OR4K13Q8NH42 304 aa17■□□□□ 0.31
SHCBP1-203ENST00000564272 GNPDA2Q8TDQ7 276 aa17■□□□□ 0.31
SHCBP1-203ENST00000564272 C1orf159Q96HA4 380 aa17■□□□□ 0.31
SHCBP1-203ENST00000564272 RACGAP1Q9H0H5 632 aa17■□□□□ 0.31
SHCBP1-203ENST00000564272 SAP30LQ9HAJ7 183 aa17■□□□□ 0.31
SHCBP1-203ENST00000564272 DECR2Q9NUI1 292 aa17■□□□□ 0.31
SHCBP1-203ENST00000564272 GRIP1Q9Y3R0 1128 aa17■□□□□ 0.31
SHCBP1-203ENST00000564272 CACNG2Q9Y698 323 aa17■□□□□ 0.31
SHCBP1-203ENST00000564272 FBN1P35555 2871 aaKnown RBP17■□□□□ 0.31
SHCBP1-203ENST00000564272 IGHV1-69-2A0A0G2JMI3 117 aa16.99■□□□□ 0.31
SHCBP1-203ENST00000564272 PLSCR5A0PG75 271 aa16.99■□□□□ 0.31
SHCBP1-203ENST00000564272 OR6C6A6NF89 314 aa16.99■□□□□ 0.31
SHCBP1-203ENST00000564272 H3BSA7 217 aa16.99■□□□□ 0.31
SHCBP1-203ENST00000564272 DYNC1I1O14576 645 aa16.99■□□□□ 0.31
SHCBP1-203ENST00000564272 ARPC3O15145 178 aa16.99■□□□□ 0.31
SHCBP1-203ENST00000564272 RER1O15258 196 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms