RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 NABP1Q96AH0 204 aa14.85□□□□□ -0.03
CMTM3-208ENST00000564247 LRRC46Q96FV0 321 aa14.85□□□□□ -0.03
CMTM3-208ENST00000564247 ZNF696Q9H7X3 374 aa14.85□□□□□ -0.03
CMTM3-208ENST00000564247 SLC24A3Q9HC58 644 aa14.85□□□□□ -0.03
CMTM3-208ENST00000564247 GALNT8Q9NY28 637 aa14.85□□□□□ -0.03
CMTM3-208ENST00000564247 ERVK-18Q9QC07 812 aa14.85□□□□□ -0.03
CMTM3-208ENST00000564247 DIMT1Q9UNQ2 313 aaKnown RBP14.85□□□□□ -0.03
CMTM3-208ENST00000564247 EXOSC1Q9Y3B2 195 aaKnown RBP14.85□□□□□ -0.03
CMTM3-208ENST00000564247 CSMD2Q7Z408 3487 aa14.85□□□□□ -0.03
CMTM3-208ENST00000564247 LYZL6O75951 148 aa14.84□□□□□ -0.03
CMTM3-208ENST00000564247 SEC14L2O76054 403 aa14.84□□□□□ -0.03
CMTM3-208ENST00000564247 SCG5P05408 212 aa14.84□□□□□ -0.03
CMTM3-208ENST00000564247 LYNP07948 512 aa14.84□□□□□ -0.03
CMTM3-208ENST00000564247 COX5AP20674 150 aa14.84□□□□□ -0.03
CMTM3-208ENST00000564247 ASCL1P50553 236 aa14.84□□□□□ -0.03
CMTM3-208ENST00000564247 HCCSP53701 268 aa14.84□□□□□ -0.03
CMTM3-208ENST00000564247 FOXG1P55316 489 aaPredicted RBP14.84□□□□□ -0.03
CMTM3-208ENST00000564247 FBXL19-AS1Q494R0 122 aa14.84□□□□□ -0.03
CMTM3-208ENST00000564247 SLC36A2Q495M3 483 aa14.84□□□□□ -0.03
CMTM3-208ENST00000564247 SFRP5Q5T4F7 317 aa14.84□□□□□ -0.03
CMTM3-208ENST00000564247 ZNF474Q6S9Z5 364 aaPredicted RBP14.84□□□□□ -0.03
CMTM3-208ENST00000564247 KLHL24Q6TFL4 600 aa14.84□□□□□ -0.03
CMTM3-208ENST00000564247 PRSS48Q7RTY5 328 aa14.84□□□□□ -0.03
CMTM3-208ENST00000564247 DPPA2Q7Z7J5 298 aa14.84□□□□□ -0.03
CMTM3-208ENST00000564247 SYT9Q86SS6 491 aa14.84□□□□□ -0.03
CMTM3-208ENST00000564247 CXorf67Q86X51 503 aaPredicted RBP14.84□□□□□ -0.03
CMTM3-208ENST00000564247 C1orf162Q8NEQ5 155 aaPredicted RBP14.84□□□□□ -0.03
CMTM3-208ENST00000564247 OTOSQ8NHW6 89 aa14.84□□□□□ -0.03
CMTM3-208ENST00000564247 THEM6Q8WUY1 208 aa14.84□□□□□ -0.03
CMTM3-208ENST00000564247 NANOS1Q8WY41 292 aaKnown RBP14.84□□□□□ -0.03
CMTM3-208ENST00000564247 BCL2L2Q92843 193 aaPredicted RBP14.84□□□□□ -0.03
CMTM3-208ENST00000564247 TBX5Q99593 518 aa14.84□□□□□ -0.03
CMTM3-208ENST00000564247 SH3GL3Q99963 347 aa14.84□□□□□ -0.03
CMTM3-208ENST00000564247 RHNO1Q9BSD3 238 aa14.84□□□□□ -0.03
CMTM3-208ENST00000564247 ZNF416Q9BWM5 594 aa14.84□□□□□ -0.03
CMTM3-208ENST00000564247 RNF121Q9H920 327 aa14.84□□□□□ -0.03
CMTM3-208ENST00000564247 CYB5R1Q9UHQ9 305 aa14.84□□□□□ -0.03
CMTM3-208ENST00000564247 CSMD1Q96PZ7 3565 aa14.84□□□□□ -0.03
CMTM3-208ENST00000564247 PDZD2O15018 2839 aa14.84□□□□□ -0.03
CMTM3-208ENST00000564247 CREBBPQ92793 2442 aa14.84□□□□□ -0.03
CMTM3-208ENST00000564247 A0A087WXM4 84 aa14.83□□□□□ -0.04
CMTM3-208ENST00000564247 A0A096LPE4 126 aa14.83□□□□□ -0.04
CMTM3-208ENST00000564247 A0A1W2PPZ6 126 aa14.83□□□□□ -0.04
CMTM3-208ENST00000564247 J3QRE1 110 aa14.83□□□□□ -0.04
CMTM3-208ENST00000564247 IL32P24001 234 aa14.83□□□□□ -0.04
CMTM3-208ENST00000564247 C21orf33P30042 268 aaPredicted RBP14.83□□□□□ -0.04
CMTM3-208ENST00000564247 HOXC12P31275 282 aa14.83□□□□□ -0.04
CMTM3-208ENST00000564247 CAPZA2P47755 286 aa14.83□□□□□ -0.04
CMTM3-208ENST00000564247 UBE2NP61088 152 aaKnown RBP14.83□□□□□ -0.04
CMTM3-208ENST00000564247 PIGFQ07326 219 aa14.83□□□□□ -0.04
CMTM3-208ENST00000564247 AQP6Q13520 282 aa14.83□□□□□ -0.04
CMTM3-208ENST00000564247 EIF2B1Q14232 305 aaKnown RBP14.83□□□□□ -0.04
CMTM3-208ENST00000564247 GABRA6Q16445 453 aa14.83□□□□□ -0.04
CMTM3-208ENST00000564247 PCK2Q16822 640 aa14.83□□□□□ -0.04
CMTM3-208ENST00000564247 OTPQ5XKR4 325 aa14.83□□□□□ -0.04
CMTM3-208ENST00000564247 KCTD18Q6PI47 426 aaPredicted RBP14.83□□□□□ -0.04
CMTM3-208ENST00000564247 BHLHA15Q7RTS1 189 aaPredicted RBP14.83□□□□□ -0.04
CMTM3-208ENST00000564247 CDC20BQ86Y33 519 aa14.83□□□□□ -0.04
CMTM3-208ENST00000564247 SKA3Q8IX90 412 aa14.83□□□□□ -0.04
CMTM3-208ENST00000564247 SVOPQ8N4V2 548 aa14.83□□□□□ -0.04
CMTM3-208ENST00000564247 GJC3Q8NFK1 279 aa14.83□□□□□ -0.04
CMTM3-208ENST00000564247 TSPAN14Q8NG11 270 aa14.83□□□□□ -0.04
CMTM3-208ENST00000564247 ASB17Q8WXJ9 295 aa14.83□□□□□ -0.04
CMTM3-208ENST00000564247 HTRA1Q92743 480 aa14.83□□□□□ -0.04
CMTM3-208ENST00000564247 USB1Q9BQ65 265 aaKnown RBP14.83□□□□□ -0.04
CMTM3-208ENST00000564247 C1orf198Q9H425 327 aa14.83□□□□□ -0.04
CMTM3-208ENST00000564247 PAK1IP1Q9NWT1 392 aaPredicted RBP14.83□□□□□ -0.04
CMTM3-208ENST00000564247 JKAMPQ9P055 326 aa14.83□□□□□ -0.04
CMTM3-208ENST00000564247 ASH2LQ9UBL3 628 aa14.83□□□□□ -0.04
CMTM3-208ENST00000564247 KCNN3Q9UGI6 736 aa14.83□□□□□ -0.04
CMTM3-208ENST00000564247 ERGIC3Q9Y282 383 aa14.83□□□□□ -0.04
CMTM3-208ENST00000564247 TIMM10BQ9Y5J6 103 aa14.83□□□□□ -0.04
CMTM3-208ENST00000564247 RAD51DO75771 328 aa14.82□□□□□ -0.04
CMTM3-208ENST00000564247 IGHA1P01876 353 aa14.82□□□□□ -0.04
CMTM3-208ENST00000564247 ALOX5APP20292 161 aa14.82□□□□□ -0.04
CMTM3-208ENST00000564247 ARR3P36575 388 aa14.82□□□□□ -0.04
CMTM3-208ENST00000564247 CD79BP40259 229 aa14.82□□□□□ -0.04
CMTM3-208ENST00000564247 PEX19P40855 299 aa14.82□□□□□ -0.04
CMTM3-208ENST00000564247 CDH15P55291 814 aa14.82□□□□□ -0.04
CMTM3-208ENST00000564247 SCRN3Q0VDG4 424 aa14.82□□□□□ -0.04
CMTM3-208ENST00000564247 ENDOGQ14249 297 aaKnown RBP14.82□□□□□ -0.04
CMTM3-208ENST00000564247 TBRG1Q3YBR2 411 aa14.82□□□□□ -0.04
CMTM3-208ENST00000564247 RNLSQ5VYX0 342 aa14.82□□□□□ -0.04
CMTM3-208ENST00000564247 TMEM53Q6P2H8 277 aa14.82□□□□□ -0.04
CMTM3-208ENST00000564247 ZNF773Q6PK81 442 aa14.82□□□□□ -0.04
CMTM3-208ENST00000564247 TMPRSS11AQ6ZMR5 421 aa14.82□□□□□ -0.04
CMTM3-208ENST00000564247 DCXRQ7Z4W1 244 aa14.82□□□□□ -0.04
CMTM3-208ENST00000564247 LHFPL3Q86UP9 236 aa14.82□□□□□ -0.04
CMTM3-208ENST00000564247 LINC00346Q8IVM7 164 aa14.82□□□□□ -0.04
CMTM3-208ENST00000564247 C17orf78Q8N4C9 275 aa14.82□□□□□ -0.04
CMTM3-208ENST00000564247 STEAP2Q8NFT2 490 aa14.82□□□□□ -0.04
CMTM3-208ENST00000564247 SMAP2Q8WU79 429 aaPredicted RBP14.82□□□□□ -0.04
CMTM3-208ENST00000564247 SNX33Q8WV41 574 aa14.82□□□□□ -0.04
CMTM3-208ENST00000564247 RNASE6Q93091 150 aaKnown RBP14.82□□□□□ -0.04
CMTM3-208ENST00000564247 BOD1Q96IK1 185 aa14.82□□□□□ -0.04
CMTM3-208ENST00000564247 JAM3Q9BX67 310 aa14.82□□□□□ -0.04
CMTM3-208ENST00000564247 CDCA4Q9BXL8 241 aa14.82□□□□□ -0.04
CMTM3-208ENST00000564247 ERVK13-1Q9NX77 482 aa14.82□□□□□ -0.04
CMTM3-208ENST00000564247 ANKHD1Q8IWZ3 2542 aaKnown RBP14.82□□□□□ -0.04
CMTM3-208ENST00000564247 A0A1W2PQL4 384 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms