RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 TUBG1P23258 451 aa11.51□□□□□ -0.57
CLK3-213ENST00000563842 GCH1P30793 250 aa11.51□□□□□ -0.57
CLK3-213ENST00000563842 PPP1R8Q12972 351 aaKnown RBP11.51□□□□□ -0.57
CLK3-213ENST00000563842 NKPD1Q17RQ9 610 aa11.51□□□□□ -0.57
CLK3-213ENST00000563842 ZNF718Q3SXZ3 478 aa11.51□□□□□ -0.57
CLK3-213ENST00000563842 ZNF774Q6NX45 483 aa11.51□□□□□ -0.57
CLK3-213ENST00000563842 CD300LDQ6UXZ3 194 aa11.51□□□□□ -0.57
CLK3-213ENST00000563842 ICA1LQ8NDH6 482 aa11.51□□□□□ -0.57
CLK3-213ENST00000563842 OR10G2Q8NGC3 310 aa11.51□□□□□ -0.57
CLK3-213ENST00000563842 OR52E2Q8NGJ4 325 aa11.51□□□□□ -0.57
CLK3-213ENST00000563842 OR1J1Q8NGS3 322 aa11.51□□□□□ -0.57
CLK3-213ENST00000563842 C10orf105Q8TEF2 133 aa11.51□□□□□ -0.57
CLK3-213ENST00000563842 SNX33Q8WV41 574 aa11.51□□□□□ -0.57
CLK3-213ENST00000563842 NMNAT3Q96T66 252 aa11.51□□□□□ -0.57
CLK3-213ENST00000563842 SMR3AQ99954 134 aa11.51□□□□□ -0.57
CLK3-213ENST00000563842 SYT3Q9BQG1 590 aa11.51□□□□□ -0.57
CLK3-213ENST00000563842 PIMREGQ9BSJ6 248 aa11.51□□□□□ -0.57
CLK3-213ENST00000563842 OR51B6Q9H340 312 aa11.51□□□□□ -0.57
CLK3-213ENST00000563842 EGLN3Q9H6Z9 239 aa11.51□□□□□ -0.57
CLK3-213ENST00000563842 SRA1Q9HD15 236 aaKnown RBP11.51□□□□□ -0.57
CLK3-213ENST00000563842 EMC7Q9NPA0 242 aa11.51□□□□□ -0.57
CLK3-213ENST00000563842 TUBG2Q9NRH3 451 aa11.51□□□□□ -0.57
CLK3-213ENST00000563842 PLEK2Q9NYT0 353 aa11.51□□□□□ -0.57
CLK3-213ENST00000563842 IGLV3-9A0A075B6K5 115 aa11.5□□□□□ -0.57
CLK3-213ENST00000563842 LOC100509620A0A075B734 347 aa11.5□□□□□ -0.57
CLK3-213ENST00000563842 TCRBV3S1A0A5B6 114 aa11.5□□□□□ -0.57
CLK3-213ENST00000563842 H3BSA7 217 aa11.5□□□□□ -0.57
CLK3-213ENST00000563842 DOK2O60496 412 aa11.5□□□□□ -0.57
CLK3-213ENST00000563842 ICMTO60725 284 aa11.5□□□□□ -0.57
CLK3-213ENST00000563842 E2F6O75461 281 aa11.5□□□□□ -0.57
CLK3-213ENST00000563842 SCG5P05408 212 aa11.5□□□□□ -0.57
CLK3-213ENST00000563842 HTR5AP47898 357 aa11.5□□□□□ -0.57
CLK3-213ENST00000563842 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.5□□□□□ -0.57
CLK3-213ENST00000563842 CLEC12AQ5QGZ9 265 aa11.5□□□□□ -0.57
CLK3-213ENST00000563842 SLC35F1Q5T1Q4 408 aa11.5□□□□□ -0.57
CLK3-213ENST00000563842 UGT2A3Q6UWM9 527 aa11.5□□□□□ -0.57
CLK3-213ENST00000563842 ZBTB46Q86UZ6 589 aa11.5□□□□□ -0.57
CLK3-213ENST00000563842 SDR9C7Q8NEX9 313 aa11.5□□□□□ -0.57
CLK3-213ENST00000563842 GJC3Q8NFK1 279 aa11.5□□□□□ -0.57
CLK3-213ENST00000563842 OR2T33Q8NG76 320 aa11.5□□□□□ -0.57
CLK3-213ENST00000563842 IPCEF1Q8WWN9 437 aaPredicted RBP11.5□□□□□ -0.57
CLK3-213ENST00000563842 C4orf45Q96LM5 186 aa11.5□□□□□ -0.57
CLK3-213ENST00000563842 COG8Q96MW5 612 aa11.5□□□□□ -0.57
CLK3-213ENST00000563842 FOXN4Q96NZ1 517 aa11.5□□□□□ -0.57
CLK3-213ENST00000563842 TSSK2Q96PF2 358 aa11.5□□□□□ -0.57
CLK3-213ENST00000563842 TSSK6Q9BXA6 273 aa11.5□□□□□ -0.57
CLK3-213ENST00000563842 CADM1Q9BY67 442 aaKnown RBP11.5□□□□□ -0.57
CLK3-213ENST00000563842 ZNF556Q9HAH1 456 aa11.5□□□□□ -0.57
CLK3-213ENST00000563842 RPRD1BQ9NQG5 326 aaKnown RBP11.5□□□□□ -0.57
CLK3-213ENST00000563842 VNN3Q9NY84 501 aa11.5□□□□□ -0.57
CLK3-213ENST00000563842 TAAR3PQ9P1P4 343 aa11.5□□□□□ -0.57
CLK3-213ENST00000563842 ASH2LQ9UBL3 628 aa11.5□□□□□ -0.57
CLK3-213ENST00000563842 ATPIF1Q9UII2 106 aa11.5□□□□□ -0.57
CLK3-213ENST00000563842 KLHL21Q9UJP4 597 aa11.5□□□□□ -0.57
CLK3-213ENST00000563842 ZANQ9Y493 2812 aa11.49□□□□□ -0.57
CLK3-213ENST00000563842 IGLV1-36A0A0B4J1U3 117 aa11.49□□□□□ -0.57
CLK3-213ENST00000563842 BHLHE40O14503 412 aa11.49□□□□□ -0.57
CLK3-213ENST00000563842 FKBP6O75344 327 aa11.49□□□□□ -0.57
CLK3-213ENST00000563842 ABHD16AO95870 558 aa11.49□□□□□ -0.57
CLK3-213ENST00000563842 IFNGP01579 166 aa11.49□□□□□ -0.57
CLK3-213ENST00000563842 HLA-DQA2P01906 255 aa11.49□□□□□ -0.57
CLK3-213ENST00000563842 DAOP14920 347 aa11.49□□□□□ -0.57
CLK3-213ENST00000563842 CBX1P83916 185 aa11.49□□□□□ -0.57
CLK3-213ENST00000563842 LOXL1Q08397 574 aaPredicted RBP11.49□□□□□ -0.57
CLK3-213ENST00000563842 CARTPTQ16568 116 aa11.49□□□□□ -0.57
CLK3-213ENST00000563842 MSMPQ1L6U9 139 aa11.49□□□□□ -0.57
CLK3-213ENST00000563842 TMEM154Q6P9G4 183 aa11.49□□□□□ -0.57
CLK3-213ENST00000563842 VASH1Q7L8A9 365 aaPredicted RBP11.49□□□□□ -0.57
CLK3-213ENST00000563842 LRP11Q86VZ4 500 aa11.49□□□□□ -0.57
CLK3-213ENST00000563842 OR6V1Q8N148 313 aa11.49□□□□□ -0.57
CLK3-213ENST00000563842 LNX2Q8N448 690 aa11.49□□□□□ -0.57
CLK3-213ENST00000563842 PAPD5Q8NDF8 572 aaKnown RBP11.49□□□□□ -0.57
CLK3-213ENST00000563842 NPEPL1Q8NDH3 523 aa11.49□□□□□ -0.57
CLK3-213ENST00000563842 OR2T4Q8NH00 348 aa11.49□□□□□ -0.57
CLK3-213ENST00000563842 TEX47Q8TBZ9 253 aa11.49□□□□□ -0.57
CLK3-213ENST00000563842 UBASH3BQ8TF42 649 aa11.49□□□□□ -0.57
CLK3-213ENST00000563842 DCLRE1CQ96SD1 692 aaKnown RBP11.49□□□□□ -0.57
CLK3-213ENST00000563842 CDADC1Q9BWV3 514 aa11.49□□□□□ -0.57
CLK3-213ENST00000563842 TBCCD1Q9NVR7 557 aa11.49□□□□□ -0.57
CLK3-213ENST00000563842 DNAJB9Q9UBS3 223 aa11.49□□□□□ -0.57
CLK3-213ENST00000563842 KCNG2Q9UJ96 466 aa11.49□□□□□ -0.57
CLK3-213ENST00000563842 FZR1Q9UM11 496 aa11.49□□□□□ -0.57
CLK3-213ENST00000563842 NSD1Q96L73 2696 aaPredicted RBP11.48□□□□□ -0.57
CLK3-213ENST00000563842 OR6C68A6NDL8 312 aa11.48□□□□□ -0.57
CLK3-213ENST00000563842 OR6C6A6NF89 314 aa11.48□□□□□ -0.57
CLK3-213ENST00000563842 J3QW42 95 aa11.48□□□□□ -0.57
CLK3-213ENST00000563842 DCTN6O00399 190 aa11.48□□□□□ -0.57
CLK3-213ENST00000563842 DEAF1O75398 565 aaPredicted RBP11.48□□□□□ -0.57
CLK3-213ENST00000563842 LY6HO94772 140 aa11.48□□□□□ -0.57
CLK3-213ENST00000563842 MPZL1O95297 269 aa11.48□□□□□ -0.57
CLK3-213ENST00000563842 IGHV3-13P01766 116 aa11.48□□□□□ -0.57
CLK3-213ENST00000563842 GAAP10253 952 aa11.48□□□□□ -0.57
CLK3-213ENST00000563842 ANXA8P13928 327 aa11.48□□□□□ -0.57
CLK3-213ENST00000563842 USF1P22415 310 aaPredicted RBP11.48□□□□□ -0.57
CLK3-213ENST00000563842 LIPAP38571 399 aa11.48□□□□□ -0.57
CLK3-213ENST00000563842 WNT5AP41221 380 aa11.48□□□□□ -0.57
CLK3-213ENST00000563842 ALDH3B1P43353 468 aa11.48□□□□□ -0.57
CLK3-213ENST00000563842 RGS6P49758 472 aa11.48□□□□□ -0.57
CLK3-213ENST00000563842 PPP1CBP62140 327 aa11.48□□□□□ -0.57
CLK3-213ENST00000563842 PPP2R2BQ00005 443 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms