RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 SH3GLB1Q9Y371 365 aa15.71■□□□□ 0.11
NME3-204ENST00000563498 MED31Q9Y3C7 131 aa15.71■□□□□ 0.11
NME3-204ENST00000563498 SURF4O15260 269 aa15.7■□□□□ 0.1
NME3-204ENST00000563498 COX5BP10606 129 aa15.7■□□□□ 0.1
NME3-204ENST00000563498 KITLGP21583 273 aa15.7■□□□□ 0.1
NME3-204ENST00000563498 MDH2P40926 338 aaKnown RBP15.7■□□□□ 0.1
NME3-204ENST00000563498 MTNR1AP48039 350 aa15.7■□□□□ 0.1
NME3-204ENST00000563498 GZMMP51124 257 aa15.7■□□□□ 0.1
NME3-204ENST00000563498 RPL27P61353 136 aaKnown RBP15.7■□□□□ 0.1
NME3-204ENST00000563498 HNRNPA0Q13151 305 aaKnown RBP15.7■□□□□ 0.1
NME3-204ENST00000563498 ESCO2Q56NI9 601 aa15.7■□□□□ 0.1
NME3-204ENST00000563498 LEG1Q6P5S2 330 aa15.7■□□□□ 0.1
NME3-204ENST00000563498 MUC20Q8N307 709 aaPredicted RBP15.7■□□□□ 0.1
NME3-204ENST00000563498 OR2Z1Q8NG97 314 aa15.7■□□□□ 0.1
NME3-204ENST00000563498 IL20RAQ9UHF4 553 aa15.7■□□□□ 0.1
NME3-204ENST00000563498 PPP1R3CQ9UQK1 317 aa15.7■□□□□ 0.1
NME3-204ENST00000563498 LRCH1Q9Y2L9 728 aa15.7■□□□□ 0.1
NME3-204ENST00000563498 C12orf71A8MTZ7 269 aa15.69■□□□□ 0.1
NME3-204ENST00000563498 ABHD16AO95870 558 aa15.69■□□□□ 0.1
NME3-204ENST00000563498 MSR1P21757 451 aa15.69■□□□□ 0.1
NME3-204ENST00000563498 TOP3AQ13472 1001 aaPredicted RBP15.69■□□□□ 0.1
NME3-204ENST00000563498 PIN1Q13526 163 aaPredicted RBP15.69■□□□□ 0.1
NME3-204ENST00000563498 NFYCQ13952 458 aa15.69■□□□□ 0.1
NME3-204ENST00000563498 ENDOGQ14249 297 aaKnown RBP15.69■□□□□ 0.1
NME3-204ENST00000563498 OCLNQ16625 522 aa15.69■□□□□ 0.1
NME3-204ENST00000563498 Q6ZR03 302 aa15.69■□□□□ 0.1
NME3-204ENST00000563498 OR52E2Q8NGJ4 325 aa15.69■□□□□ 0.1
NME3-204ENST00000563498 A6NIZ1 184 aa15.68■□□□□ 0.1
NME3-204ENST00000563498 IFNL4K9M1U5 179 aa15.68■□□□□ 0.1
NME3-204ENST00000563498 CD80P33681 288 aa15.68■□□□□ 0.1
NME3-204ENST00000563498 RAP1BP61224 184 aa15.68■□□□□ 0.1
NME3-204ENST00000563498 RAP1AP62834 184 aa15.68■□□□□ 0.1
NME3-204ENST00000563498 PAX2Q02962 417 aa15.68■□□□□ 0.1
NME3-204ENST00000563498 PARP8Q8N3A8 854 aa15.68■□□□□ 0.1
NME3-204ENST00000563498 CLDN22Q8N7P3 220 aa15.68■□□□□ 0.1
NME3-204ENST00000563498 UPRTQ96BW1 309 aa15.68■□□□□ 0.1
NME3-204ENST00000563498 MMP24Q9Y5R2 645 aa15.68■□□□□ 0.1
NME3-204ENST00000563498 A0A1W2PPL8 197 aa15.67■□□□□ 0.1
NME3-204ENST00000563498 CEACAM18A8MTB9 384 aa15.67■□□□□ 0.1
NME3-204ENST00000563498 TMEM178BH3BS89 294 aa15.67■□□□□ 0.1
NME3-204ENST00000563498 PLATP00750 562 aa15.67■□□□□ 0.1
NME3-204ENST00000563498 WNT2P09544 360 aa15.67■□□□□ 0.1
NME3-204ENST00000563498 IGHV4-38-2P0DP08 117 aa15.67■□□□□ 0.1
NME3-204ENST00000563498 TNFRSF1BP20333 461 aa15.67■□□□□ 0.1
NME3-204ENST00000563498 BTNL3Q6UXE8 466 aa15.67■□□□□ 0.1
NME3-204ENST00000563498 LRRN1Q6UXK5 716 aa15.67■□□□□ 0.1
NME3-204ENST00000563498 ITLN1Q8WWA0 313 aa15.67■□□□□ 0.1
NME3-204ENST00000563498 HAVCR1Q96D42 359 aa15.67■□□□□ 0.1
NME3-204ENST00000563498 BPIFA2Q96DR5 249 aa15.67■□□□□ 0.1
NME3-204ENST00000563498 THOC1Q96FV9 657 aaKnown RBP15.67■□□□□ 0.1
NME3-204ENST00000563498 COG8Q96MW5 612 aa15.67■□□□□ 0.1
NME3-204ENST00000563498 POLE4Q9NR33 117 aa15.67■□□□□ 0.1
NME3-204ENST00000563498 RBMXP38159 391 aaKnown RBP15.66■□□□□ 0.1
NME3-204ENST00000563498 MMP16P51512 607 aa15.66■□□□□ 0.1
NME3-204ENST00000563498 SCRN3Q0VDG4 424 aa15.66■□□□□ 0.1
NME3-204ENST00000563498 ANKDD1AQ495B1 522 aa15.66■□□□□ 0.1
NME3-204ENST00000563498 AGBL2Q5U5Z8 902 aa15.66■□□□□ 0.1
NME3-204ENST00000563498 NANOGP8Q6NSW7 305 aa15.66■□□□□ 0.1
NME3-204ENST00000563498 C16orf87Q6PH81 154 aa15.66■□□□□ 0.1
NME3-204ENST00000563498 LRRC75AQ8NAA5 344 aa15.66■□□□□ 0.1
NME3-204ENST00000563498 TMIGD2Q96BF3 282 aa15.66■□□□□ 0.1
NME3-204ENST00000563498 CMBLQ96DG6 245 aa15.66■□□□□ 0.1
NME3-204ENST00000563498 OR2V2Q96R30 315 aa15.66■□□□□ 0.1
NME3-204ENST00000563498 SH3GL1Q99961 368 aa15.66■□□□□ 0.1
NME3-204ENST00000563498 SSBP3Q9BWW4 388 aaPredicted RBP15.66■□□□□ 0.1
NME3-204ENST00000563498 POFUT1Q9H488 388 aa15.66■□□□□ 0.1
NME3-204ENST00000563498 GCM1Q9NP62 436 aa15.66■□□□□ 0.1
NME3-204ENST00000563498 A0A1B0GUS0 222 aa15.65■□□□□ 0.1
NME3-204ENST00000563498 PIP5K1CO60331 668 aa15.65■□□□□ 0.1
NME3-204ENST00000563498 SHOX2O60902 331 aaPredicted RBP15.65■□□□□ 0.1
NME3-204ENST00000563498 FSTL3O95633 263 aa15.65■□□□□ 0.1
NME3-204ENST00000563498 IFNA14P01570 189 aa15.65■□□□□ 0.1
NME3-204ENST00000563498 MDKP21741 143 aaPredicted RBP15.65■□□□□ 0.1
NME3-204ENST00000563498 CTXN1P60606 82 aa15.65■□□□□ 0.1
NME3-204ENST00000563498 ST3GAL3Q11203 375 aa15.65■□□□□ 0.1
NME3-204ENST00000563498 CYLC2Q14093 348 aaPredicted RBP15.65■□□□□ 0.1
NME3-204ENST00000563498 MIDNQ504T8 468 aa15.65■□□□□ 0.1
NME3-204ENST00000563498 CALHM3Q86XJ0 350 aa15.65■□□□□ 0.1
NME3-204ENST00000563498 PTP4A1Q93096 173 aa15.65■□□□□ 0.1
NME3-204ENST00000563498 DACT3Q96B18 629 aaPredicted RBP15.65■□□□□ 0.1
NME3-204ENST00000563498 MAGEB18Q96M61 343 aa15.65■□□□□ 0.1
NME3-204ENST00000563498 PRDM13Q9H4Q3 707 aa15.65■□□□□ 0.1
NME3-204ENST00000563498 IGHV2-70DA0A0C4DH43 119 aa15.64■□□□□ 0.09
NME3-204ENST00000563498 J3QW42 95 aa15.64■□□□□ 0.09
NME3-204ENST00000563498 DOK2O60496 412 aa15.64■□□□□ 0.09
NME3-204ENST00000563498 SCG5P05408 212 aa15.64■□□□□ 0.09
NME3-204ENST00000563498 IFI30P13284 250 aa15.64■□□□□ 0.09
NME3-204ENST00000563498 RAC2P15153 192 aa15.64■□□□□ 0.09
NME3-204ENST00000563498 OR1E2P47887 323 aa15.64■□□□□ 0.09
NME3-204ENST00000563498 HTR5AP47898 357 aa15.64■□□□□ 0.09
NME3-204ENST00000563498 GUCY1A3Q02108 690 aa15.64■□□□□ 0.09
NME3-204ENST00000563498 ZNF362Q5T0B9 420 aaPredicted RBP15.64■□□□□ 0.09
NME3-204ENST00000563498 SLC27A4Q6P1M0 643 aa15.64■□□□□ 0.09
NME3-204ENST00000563498 SPATC1Q76KD6 591 aa15.64■□□□□ 0.09
NME3-204ENST00000563498 IGFN1Q86VF2 1251 aa15.64■□□□□ 0.09
NME3-204ENST00000563498 OR8J3Q8NGG0 315 aa15.64■□□□□ 0.09
NME3-204ENST00000563498 RAB40AQ8WXH6 277 aa15.64■□□□□ 0.09
NME3-204ENST00000563498 TMEM165Q9HC07 324 aa15.64■□□□□ 0.09
NME3-204ENST00000563498 MIOXQ9UGB7 285 aa15.64■□□□□ 0.09
NME3-204ENST00000563498 STARD10Q9Y365 291 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms