RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 S100A9P06702 114 aaKnown RBP2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 OR5H8P0DN80 308 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 IGHV3-43DP0DP04 118 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 PRKACAP17612 351 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 ELK1P19419 428 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 CPN2P22792 545 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 CCR6P51684 374 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 NUP107P57740 925 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 GNB2P62879 340 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 LCN2P80188 198 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 SLC7A9P82251 487 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 MAB21L1Q13394 359 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 PRPSAP1Q14558 356 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 IL17AQ16552 155 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 SNRNP35Q16560 246 aaKnown RBP2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 CASC10Q5T4H9 136 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 ADNP2Q6IQ32 1131 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 SPESP1Q6UW49 350 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 ZNF493Q6ZR52 646 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 TMEM150AQ86TG1 271 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 FAM71E2Q8N5Q1 922 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 FAM86B1Q8N7N1 296 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 Q8N7P7 452 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 C8orf31Q8N9H6 132 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 Q8N9W7 124 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 OR51F2Q8NH61 342 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 TCP10LQ8TDR4 215 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 AURKBQ96GD4 344 aaPredicted RBP2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 DNAJC1Q96KC8 554 aaKnown RBP2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 IMMP1LQ96LU5 166 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 JSRP1Q96MG2 331 aaPredicted RBP2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 OR2M2Q96R28 347 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 ECSITQ9BQ95 431 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 IL22Q9GZX6 179 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 CDC42EP4Q9H3Q1 356 aaKnown RBP2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 UBE2ZQ9H832 354 aaPredicted RBP2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 EDA2RQ9HAV5 297 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 MRM3Q9HC36 420 aaKnown RBP2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 ZNHIT6Q9NWK9 470 aaKnown RBP2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 ADAM22Q9P0K1 906 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 NYAP2Q9P242 653 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 PEF1Q9UBV8 284 aaKnown RBP2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 SHPKQ9UHJ6 478 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 ZNF225Q9UK10 706 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 MAP3K15Q6ZN16 1313 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 TDRD6O60522 2096 aaKnown RBP2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 NCBP2LA6PVI3 153 aaKnown RBP2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 C11orf94C9JXX5 98 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 KRTAP4-16G5E9R7 235 aaPredicted RBP2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 NDUFS8O00217 210 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 XKRYO14609 159 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 SLC31A2O15432 143 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 RAD51CO43502 376 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 MPDU1O75352 247 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 CA11O75493 328 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 FARS2O95363 451 aaKnown RBP2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 TDP2O95551 362 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 C6orf47O95873 294 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 IGHV4-34P06331 123 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 PRPS2P11908 318 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 RCC1P18754 421 aaPredicted RBP2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 MSR1P21757 451 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 U2AF2P26368 475 aaKnown RBP eCLIP2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 BMI1P35226 326 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 NUDT1P36639 197 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 GPX4P36969 197 aaPredicted RBP2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 CFHR2P36980 270 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 CEACAM6P40199 344 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 PRRC2AP48634 2157 aaKnown RBP2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 CSNK1DP48730 415 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 ETV1P50549 477 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 DMTNQ08495 405 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 PSG7Q13046 419 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 OR7A5Q15622 319 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 FAM83EQ2M2I3 478 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 TTLL9Q3SXZ7 439 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 CCDC14Q49A88 953 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 BEX5Q5H9J7 111 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 TPTE2P1Q5T6R2 138 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 AADACL4Q5VUY2 407 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 ANKRD22Q5VYY1 191 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 OTPQ5XKR4 325 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 PLET1Q6UQ28 207 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 KRTAP5-5Q701N2 237 aaPredicted RBP2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 STRADAQ7RTN6 431 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 MRPL21Q7Z2W9 205 aaKnown RBP2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 TMEM135Q86UB9 458 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 CBLN2Q8IUK8 224 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 ASCC1Q8N9N2 400 aaKnown RBP2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 FBXO36Q8NEA4 188 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 OR51L1Q8NGJ5 315 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 OR2A1Q8NGT9 310 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 ACTRT1Q8TDG2 376 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 LRRC58Q96CX6 371 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 NRIP2Q9BQI9 281 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 CCDC94Q9BW85 323 aaPredicted RBP2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 HAUS4Q9H6D7 363 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 NANOGQ9H9S0 305 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 ZDHHC4Q9NPG8 344 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 LZTFL1Q9NQ48 299 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms