RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 SSTR2P30874 369 aa8.47□□□□□ -1.05
CLK3-208ENST00000562626 ARR3P36575 388 aa8.47□□□□□ -1.05
CLK3-208ENST00000562626 HCCSP53701 268 aa8.47□□□□□ -1.05
CLK3-208ENST00000562626 RAD23AP54725 363 aa8.47□□□□□ -1.05
CLK3-208ENST00000562626 LSM6P62312 80 aaKnown RBP8.47□□□□□ -1.05
CLK3-208ENST00000562626 APOFQ13790 326 aa8.47□□□□□ -1.05
CLK3-208ENST00000562626 RSPO1Q2MKA7 263 aaPredicted RBP8.47□□□□□ -1.05
CLK3-208ENST00000562626 SLC36A2Q495M3 483 aa8.47□□□□□ -1.05
CLK3-208ENST00000562626 KLHL12Q53G59 568 aa8.47□□□□□ -1.05
CLK3-208ENST00000562626 TMEM255AQ5JRV8 349 aa8.47□□□□□ -1.05
CLK3-208ENST00000562626 DNM1P34Q6PK57 102 aa8.47□□□□□ -1.05
CLK3-208ENST00000562626 RFLNBQ8N5W9 214 aa8.47□□□□□ -1.05
CLK3-208ENST00000562626 FAM169BQ8N8A8 192 aa8.47□□□□□ -1.05
CLK3-208ENST00000562626 FAM81AQ8TBF8 368 aa8.47□□□□□ -1.05
CLK3-208ENST00000562626 TMEM163Q8TC26 289 aa8.47□□□□□ -1.05
CLK3-208ENST00000562626 AKAP1Q92667 903 aaKnown RBP eCLIP8.47□□□□□ -1.05
CLK3-208ENST00000562626 ESRP2Q9H6T0 727 aaKnown RBP8.47□□□□□ -1.05
CLK3-208ENST00000562626 RNF121Q9H920 327 aa8.47□□□□□ -1.05
CLK3-208ENST00000562626 MARCH7Q9H992 704 aa8.47□□□□□ -1.05
CLK3-208ENST00000562626 SMPD3Q9NY59 655 aaPredicted RBP8.47□□□□□ -1.05
CLK3-208ENST00000562626 CYB5R1Q9UHQ9 305 aa8.47□□□□□ -1.05
CLK3-208ENST00000562626 ARID1AO14497 2285 aa8.47□□□□□ -1.05
CLK3-208ENST00000562626 CSMD1Q96PZ7 3565 aa8.47□□□□□ -1.05
CLK3-208ENST00000562626 C5orf63A6NC05 138 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 OR6C6A6NF89 314 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 H0YHG0 523 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 GPRIN2O60269 458 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 DOK2O60496 412 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 APOL3O95236 402 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 RAB36O95755 333 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 HLA-DQA2P01906 255 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 SERPINA5P05154 406 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 MRPL3P09001 348 aaKnown RBP8.46□□□□□ -1.06
CLK3-208ENST00000562626 GNAO1P09471 354 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 WNT5AP41221 380 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 NAA10P41227 235 aaPredicted RBP8.46□□□□□ -1.06
CLK3-208ENST00000562626 ERVS71-1P61550 626 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 ADAM8P78325 824 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 ADARB1P78563 741 aaKnown RBP8.46□□□□□ -1.06
CLK3-208ENST00000562626 GLO1Q04760 184 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 AQP6Q13520 282 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 PCK2Q16822 640 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 C3orf36Q3SXR2 165 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 TMEM53Q6P2H8 277 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 TMEM154Q6P9G4 183 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 TMEM108Q6UXF1 575 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 VASH1Q7L8A9 365 aaPredicted RBP8.46□□□□□ -1.06
CLK3-208ENST00000562626 TIGD4Q8IY51 512 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 CCDC36Q8IYA8 594 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 ENTHD1Q8IYW4 607 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 ZNF101Q8IZC7 436 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 SLC30A7Q8NEW0 376 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 ST7LQ8TDW4 575 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 APH1BQ8WW43 257 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 NANOS1Q8WY41 292 aaKnown RBP8.46□□□□□ -1.06
CLK3-208ENST00000562626 PLEKHA8Q96JA3 519 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 POM121L2Q96KW2 1035 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 LURAP1Q96LR2 239 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 ZNF582Q96NG8 517 aaPredicted RBP8.46□□□□□ -1.06
CLK3-208ENST00000562626 OR51B6Q9H340 312 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 POFUT1Q9H488 388 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 UBTD1Q9HAC8 227 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 SLC24A3Q9HC58 644 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 CCNB1IP1Q9NPC3 277 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 KCNG2Q9UJ96 466 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 GDF2Q9UK05 429 aaPredicted RBP8.46□□□□□ -1.06
CLK3-208ENST00000562626 ORC6Q9Y5N6 252 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 CR1P17927 2039 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 AKAP9Q99996 3911 aa8.46□□□□□ -1.06
CLK3-208ENST00000562626 LOC100130705A0A1B0GUX0 176 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 C12orf71A8MTZ7 269 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 ZNF593O00488 134 aaPredicted RBP8.45□□□□□ -1.06
CLK3-208ENST00000562626 SLC16A6O15403 523 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 PRODHO43272 600 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 SGCEO43556 437 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 ENTPD6O75354 484 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 SPARCP09486 303 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 FAM157BP0CG42 384 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 PAICSP22234 425 aaKnown RBP8.45□□□□□ -1.06
CLK3-208ENST00000562626 FMO3P31513 532 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 ENTPD1P49961 510 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 NR1H2P55055 460 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 AQP4P55087 323 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 CDH11P55287 796 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 NKX6-1P78426 367 aaPredicted RBP8.45□□□□□ -1.06
CLK3-208ENST00000562626 RIPK1Q13546 671 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 ZNF672Q499Z4 452 aaPredicted RBP8.45□□□□□ -1.06
CLK3-208ENST00000562626 FBXW10Q5XX13 1052 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 LAIR2Q6ISS4 152 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 KRT80Q6KB66 452 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 SLC22A25Q6T423 547 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 RFPL4BQ6ZWI9 263 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 SPATC1Q76KD6 591 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 SHFQ7M4L6 423 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 DPY19L4Q7Z388 723 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 SYT9Q86SS6 491 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 NAA40Q86UY6 237 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 ERI1Q8IV48 349 aaKnown RBP8.45□□□□□ -1.06
CLK3-208ENST00000562626 PACRGLQ8N7B6 248 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 IGFBPL1Q8WX77 278 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms