RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 NRN1LQ496H8 165 aa8.09□□□□□ -1.11
NSMCE1-203ENST00000562039 TMEM154Q6P9G4 183 aa8.09□□□□□ -1.11
NSMCE1-203ENST00000562039 FOXL2NBQ6ZUU3 175 aa8.09□□□□□ -1.11
NSMCE1-203ENST00000562039 JAZF1Q86VZ6 243 aa8.09□□□□□ -1.11
NSMCE1-203ENST00000562039 HIPK1Q86Z02 1210 aa8.09□□□□□ -1.11
NSMCE1-203ENST00000562039 LINC00346Q8IVM7 164 aa8.09□□□□□ -1.11
NSMCE1-203ENST00000562039 ALDH16A1Q8IZ83 802 aa8.09□□□□□ -1.11
NSMCE1-203ENST00000562039 SDR9C7Q8NEX9 313 aa8.09□□□□□ -1.11
NSMCE1-203ENST00000562039 RDH5Q92781 318 aa8.09□□□□□ -1.11
NSMCE1-203ENST00000562039 NMNAT3Q96T66 252 aa8.09□□□□□ -1.11
NSMCE1-203ENST00000562039 BEX2Q9BXY8 128 aa8.09□□□□□ -1.11
NSMCE1-203ENST00000562039 BCL2L14Q9BZR8 327 aa8.09□□□□□ -1.11
NSMCE1-203ENST00000562039 NDEL1Q9GZM8 345 aa8.09□□□□□ -1.11
NSMCE1-203ENST00000562039 MSL2Q9HCI7 577 aa8.09□□□□□ -1.11
NSMCE1-203ENST00000562039 MYOZ1Q9NP98 299 aaPredicted RBP8.09□□□□□ -1.11
NSMCE1-203ENST00000562039 KRCC1Q9NPI7 259 aaPredicted RBP8.09□□□□□ -1.11
NSMCE1-203ENST00000562039 NRIP3Q9NQ35 241 aa8.09□□□□□ -1.11
NSMCE1-203ENST00000562039 RPRD1BQ9NQG5 326 aaKnown RBP8.09□□□□□ -1.11
NSMCE1-203ENST00000562039 VNN3Q9NY84 501 aa8.09□□□□□ -1.11
NSMCE1-203ENST00000562039 PLEK2Q9NYT0 353 aa8.09□□□□□ -1.11
NSMCE1-203ENST00000562039 ASH2LQ9UBL3 628 aa8.09□□□□□ -1.11
NSMCE1-203ENST00000562039 KCNS2Q9ULS6 477 aa8.09□□□□□ -1.11
NSMCE1-203ENST00000562039 U3KQV3 271 aa8.09□□□□□ -1.11
NSMCE1-203ENST00000562039 IGLV3-9A0A075B6K5 115 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 IGHV3-64DA0A0J9YX35 117 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 TCRBV5S2A0A599 114 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 ZSCAN5BA6NJL1 495 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 TNFRSF11BO00300 401 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 RER1O15258 196 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 SGCEO43556 437 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 SNAP29O95721 258 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 ABHD16AO95870 558 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 T-ENOLP0DO92 83 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 ZNF250P15622 560 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 HIST1H1CP16403 213 aaKnown RBP8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 SLC6A6P31641 620 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 PYCR1P32322 319 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 EVX1P49640 407 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 ZNF81P51508 661 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 CHN2P52757 468 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 SMIM11AP58511 58 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 RIN1Q13671 783 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 RFX4Q33E94 735 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 ZNF718Q3SXZ3 478 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 CCDC92Q53HC0 331 aaPredicted RBP8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 GPR139Q6DWJ6 353 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 FAM166AQ6J272 317 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 PGBD2Q6P3X8 592 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 DPY19L2P2Q6ZN68 376 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 USP51Q70EK9 711 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 VASH1Q7L8A9 365 aaPredicted RBP8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 OR5AS1Q8N127 324 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 CYB561A3Q8NBI2 242 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 OR52E2Q8NGJ4 325 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 CLDND2Q8NHS1 167 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 FNDC8Q8TC99 324 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 KLF14Q8TD94 323 aaPredicted RBP8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 GNPDA2Q8TDQ7 276 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 MARS2Q96GW9 593 aaKnown RBP8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 C4orf45Q96LM5 186 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 SHARPINQ9H0F6 387 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 WDR76Q9H967 626 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 DECR2Q9NUI1 292 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 DCAF16Q9NXF7 216 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 PTTG3PQ9NZH4 202 aa8.08□□□□□ -1.12
NSMCE1-203ENST00000562039 DNHD1Q96M86 4753 aa8.07□□□□□ -1.12
NSMCE1-203ENST00000562039 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.07□□□□□ -1.123e-8■■■■■ 31.6
NSMCE1-203ENST00000562039 TVP23AA6NH52 213 aa8.07□□□□□ -1.12
NSMCE1-203ENST00000562039 FAM157AC9JC47 383 aa8.07□□□□□ -1.12
NSMCE1-203ENST00000562039 DYNC1I1O14576 645 aa8.07□□□□□ -1.12
NSMCE1-203ENST00000562039 TIMM8AO60220 97 aaPredicted RBP8.07□□□□□ -1.12
NSMCE1-203ENST00000562039 SOX14O95416 240 aa8.07□□□□□ -1.12
NSMCE1-203ENST00000562039 FAM107AO95990 144 aa8.07□□□□□ -1.12
NSMCE1-203ENST00000562039 RENP00797 406 aa8.07□□□□□ -1.12
NSMCE1-203ENST00000562039 GASTP01350 101 aa8.07□□□□□ -1.12
NSMCE1-203ENST00000562039 IGHV1-46P01743 117 aa8.07□□□□□ -1.12
NSMCE1-203ENST00000562039 HLA-DQA2P01906 255 aa8.07□□□□□ -1.12
NSMCE1-203ENST00000562039 FPR3P25089 353 aa8.07□□□□□ -1.12
NSMCE1-203ENST00000562039 GIFP27352 417 aa8.07□□□□□ -1.12
NSMCE1-203ENST00000562039 NOS3P29474 1203 aa8.07□□□□□ -1.12
NSMCE1-203ENST00000562039 RPS27P42677 84 aaKnown RBP8.07□□□□□ -1.12
NSMCE1-203ENST00000562039 GSSP48637 474 aa8.07□□□□□ -1.12
NSMCE1-203ENST00000562039 PCBD1P61457 104 aa8.07□□□□□ -1.12
NSMCE1-203ENST00000562039 SCRN3Q0VDG4 424 aa8.07□□□□□ -1.12
NSMCE1-203ENST00000562039 HLXQ14774 488 aaPredicted RBP8.07□□□□□ -1.12
NSMCE1-203ENST00000562039 CR1LQ2VPA4 569 aa8.07□□□□□ -1.12
NSMCE1-203ENST00000562039 FAM120AOSQ5T036 256 aa8.07□□□□□ -1.12
NSMCE1-203ENST00000562039 LYPD4Q6UWN0 246 aa8.07□□□□□ -1.12
NSMCE1-203ENST00000562039 DHFR2Q86XF0 187 aa8.07□□□□□ -1.12
NSMCE1-203ENST00000562039 GLB1L2Q8IW92 636 aa8.07□□□□□ -1.12
NSMCE1-203ENST00000562039 OR6V1Q8N148 313 aa8.07□□□□□ -1.12
NSMCE1-203ENST00000562039 AQP11Q8NBQ7 271 aa8.07□□□□□ -1.12
NSMCE1-203ENST00000562039 ZNF540Q8NDQ6 660 aa8.07□□□□□ -1.12
NSMCE1-203ENST00000562039 OR51L1Q8NGJ5 315 aa8.07□□□□□ -1.12
NSMCE1-203ENST00000562039 OR8D4Q8NGM9 314 aa8.07□□□□□ -1.12
NSMCE1-203ENST00000562039 OR9Q1Q8NGQ5 310 aa8.07□□□□□ -1.12
NSMCE1-203ENST00000562039 ZNRF4Q8WWF5 429 aa8.07□□□□□ -1.12
NSMCE1-203ENST00000562039 CMBLQ96DG6 245 aa8.07□□□□□ -1.12
NSMCE1-203ENST00000562039 DCLRE1CQ96SD1 692 aaKnown RBP8.07□□□□□ -1.12
NSMCE1-203ENST00000562039 GPX7Q96SL4 187 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms