RNA–Protein interactions for RNA: ENST00000561954.1

IFT140-205, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-205ENST00000561954 SLC22A31A6NKX4 558 aa12.12□□□□□ -0.47
IFT140-205ENST00000561954 CASQ2O14958 399 aaPredicted RBP12.12□□□□□ -0.47
IFT140-205ENST00000561954 PRKYO43930 277 aa12.12□□□□□ -0.47
IFT140-205ENST00000561954 GPANK1O95872 356 aa12.12□□□□□ -0.47
IFT140-205ENST00000561954 CLUP10909 449 aa12.12□□□□□ -0.47
IFT140-205ENST00000561954 ZNF35P13682 527 aa12.12□□□□□ -0.47
IFT140-205ENST00000561954 APEX1P27695 318 aaKnown RBP12.12□□□□□ -0.47
IFT140-205ENST00000561954 PEX2P28328 305 aa12.12□□□□□ -0.47
IFT140-205ENST00000561954 PCSK6P29122 969 aa12.12□□□□□ -0.47
IFT140-205ENST00000561954 EPHA2P29317 976 aa12.12□□□□□ -0.47
IFT140-205ENST00000561954 CALCRP30988 508 aa12.12□□□□□ -0.47
IFT140-205ENST00000561954 ECH1Q13011 328 aa12.12□□□□□ -0.47
IFT140-205ENST00000561954 SNTB2Q13425 540 aaKnown RBP12.12□□□□□ -0.47
IFT140-205ENST00000561954 MEP1BQ16820 701 aa12.12□□□□□ -0.47
IFT140-205ENST00000561954 KLHL12Q53G59 568 aa12.12□□□□□ -0.47
IFT140-205ENST00000561954 TEX30Q5JUR7 227 aa12.12□□□□□ -0.47
IFT140-205ENST00000561954 NXNL2Q5VZ03 156 aa12.12□□□□□ -0.47
IFT140-205ENST00000561954 SLC18B1Q6NT16 456 aa12.12□□□□□ -0.47
IFT140-205ENST00000561954 ZNF774Q6NX45 483 aa12.12□□□□□ -0.47
IFT140-205ENST00000561954 VASH1Q7L8A9 365 aaPredicted RBP12.12□□□□□ -0.47
IFT140-205ENST00000561954 C1orf174Q8IYL3 243 aa12.12□□□□□ -0.47
IFT140-205ENST00000561954 FBXL14Q8N1E6 418 aa12.12□□□□□ -0.47
IFT140-205ENST00000561954 TCEANCQ8N8B7 351 aa12.12□□□□□ -0.47
IFT140-205ENST00000561954 AKR7LQ8NHP1 331 aa12.12□□□□□ -0.47
IFT140-205ENST00000561954 FAM81AQ8TBF8 368 aa12.12□□□□□ -0.47
IFT140-205ENST00000561954 SMAP2Q8WU79 429 aaPredicted RBP12.12□□□□□ -0.47
IFT140-205ENST00000561954 PIGTQ969N2 578 aa12.12□□□□□ -0.47
IFT140-205ENST00000561954 HRASLS5Q96KN8 279 aa12.12□□□□□ -0.47
IFT140-205ENST00000561954 COQ7Q99807 217 aa12.12□□□□□ -0.47
IFT140-205ENST00000561954 HCAR1Q9BXC0 346 aa12.12□□□□□ -0.47
IFT140-205ENST00000561954 TOR3AQ9H497 397 aa12.12□□□□□ -0.47
IFT140-205ENST00000561954 MED20Q9H944 212 aa12.12□□□□□ -0.47
IFT140-205ENST00000561954 RNPEPL1Q9HAU8 725 aa12.12□□□□□ -0.47
IFT140-205ENST00000561954 MRPL22Q9NWU5 206 aaKnown RBP12.12□□□□□ -0.47
IFT140-205ENST00000561954 EIF3KQ9UBQ5 218 aaKnown RBP12.12□□□□□ -0.47
IFT140-205ENST00000561954 FBXO9Q9UK97 447 aaPredicted RBP12.12□□□□□ -0.47
IFT140-205ENST00000561954 ITPR2Q14571 2701 aa12.12□□□□□ -0.47
IFT140-205ENST00000561954 C5orf49A4QMS7 147 aa12.11□□□□□ -0.47
IFT140-205ENST00000561954 TVP23AA6NH52 213 aa12.11□□□□□ -0.47
IFT140-205ENST00000561954 J3QW42 95 aa12.11□□□□□ -0.47
IFT140-205ENST00000561954 TLX2O43763 284 aaPredicted RBP12.11□□□□□ -0.47
IFT140-205ENST00000561954 ICMTO60725 284 aa12.11□□□□□ -0.47
IFT140-205ENST00000561954 SPARCP09486 303 aa12.11□□□□□ -0.47
IFT140-205ENST00000561954 BMP4P12644 408 aa12.11□□□□□ -0.47
IFT140-205ENST00000561954 GGT2P36268 569 aa12.11□□□□□ -0.47
IFT140-205ENST00000561954 FABP6P51161 128 aa12.11□□□□□ -0.47
IFT140-205ENST00000561954 HIST1H3AP68431 136 aa12.11□□□□□ -0.47
IFT140-205ENST00000561954 SLC34A1Q06495 639 aa12.11□□□□□ -0.47
IFT140-205ENST00000561954 ELFN2Q5R3F8 820 aa12.11□□□□□ -0.47
IFT140-205ENST00000561954 OGFRL1Q5TC84 451 aaPredicted RBP12.11□□□□□ -0.47
IFT140-205ENST00000561954 HIST2H3PS2Q5TEC6 136 aa12.11□□□□□ -0.47
IFT140-205ENST00000561954 LINC01590Q5TEZ4 76 aa12.11□□□□□ -0.47
IFT140-205ENST00000561954 AGAP6Q5VW22 663 aa12.11□□□□□ -0.47
IFT140-205ENST00000561954 KRT80Q6KB66 452 aa12.11□□□□□ -0.47
IFT140-205ENST00000561954 B3GLCTQ6Y288 498 aa12.11□□□□□ -0.47
IFT140-205ENST00000561954 HIST2H3AQ71DI3 136 aa12.11□□□□□ -0.47
IFT140-205ENST00000561954 SHFQ7M4L6 423 aa12.11□□□□□ -0.47
IFT140-205ENST00000561954 ERI1Q8IV48 349 aaKnown RBP12.11□□□□□ -0.47
IFT140-205ENST00000561954 CPEB3Q8NE35 698 aaKnown RBP12.11□□□□□ -0.47
IFT140-205ENST00000561954 ZNF555Q8NEP9 628 aa12.11□□□□□ -0.47
IFT140-205ENST00000561954 LILRB1Q8NHL6 650 aaPredicted RBP12.11□□□□□ -0.47
IFT140-205ENST00000561954 TMEM171Q8WVE6 324 aa12.11□□□□□ -0.47
IFT140-205ENST00000561954 TRUB1Q8WWH5 349 aaKnown RBP12.11□□□□□ -0.47
IFT140-205ENST00000561954 PTP4A1Q93096 173 aa12.11□□□□□ -0.47
IFT140-205ENST00000561954 RFKQ969G6 155 aa12.11□□□□□ -0.47
IFT140-205ENST00000561954 POM121L2Q96KW2 1035 aa12.11□□□□□ -0.47
IFT140-205ENST00000561954 DCLRE1CQ96SD1 692 aaKnown RBP12.11□□□□□ -0.47
IFT140-205ENST00000561954 MBOAT4Q96T53 435 aa12.11□□□□□ -0.47
IFT140-205ENST00000561954 PITX2Q99697 317 aa12.11□□□□□ -0.47
IFT140-205ENST00000561954 ATF6BQ99941 703 aa12.11□□□□□ -0.47
IFT140-205ENST00000561954 BCL2L14Q9BZR8 327 aa12.11□□□□□ -0.47
IFT140-205ENST00000561954 CXorf56Q9H5V9 222 aa12.11□□□□□ -0.47
IFT140-205ENST00000561954 MARCH7Q9H992 704 aa12.11□□□□□ -0.47
IFT140-205ENST00000561954 H2AFY2Q9P0M6 372 aaPredicted RBP12.11□□□□□ -0.47
IFT140-205ENST00000561954 GDF2Q9UK05 429 aaPredicted RBP12.11□□□□□ -0.47
IFT140-205ENST00000561954 GMPPBQ9Y5P6 360 aa12.11□□□□□ -0.47
IFT140-205ENST00000561954 E7EQL1 145 aa12.1□□□□□ -0.47
IFT140-205ENST00000561954 RER1O15258 196 aa12.1□□□□□ -0.47
IFT140-205ENST00000561954 SYNGR3O43761 229 aa12.1□□□□□ -0.47
IFT140-205ENST00000561954 MPZL2O60487 215 aa12.1□□□□□ -0.47
IFT140-205ENST00000561954 ATE1O95260 518 aa12.1□□□□□ -0.47
IFT140-205ENST00000561954 CCNOP22674 350 aa12.1□□□□□ -0.47
IFT140-205ENST00000561954 SLC2A5P22732 501 aa12.1□□□□□ -0.47
IFT140-205ENST00000561954 NR4A1P22736 598 aa12.1□□□□□ -0.47
IFT140-205ENST00000561954 APOBEC3AP31941 199 aaPredicted RBP12.1□□□□□ -0.47
IFT140-205ENST00000561954 POLR2IP36954 125 aaKnown RBP12.1□□□□□ -0.47
IFT140-205ENST00000561954 RAD52P43351 418 aa12.1□□□□□ -0.47
IFT140-205ENST00000561954 RGS6P49758 472 aa12.1□□□□□ -0.47
IFT140-205ENST00000561954 NKX6-1P78426 367 aaPredicted RBP12.1□□□□□ -0.47
IFT140-205ENST00000561954 APOFQ13790 326 aa12.1□□□□□ -0.47
IFT140-205ENST00000561954 GGTLC2Q14390 218 aa12.1□□□□□ -0.47
IFT140-205ENST00000561954 PCK2Q16822 640 aa12.1□□□□□ -0.47
IFT140-205ENST00000561954 LRRC36Q1X8D7 754 aa12.1□□□□□ -0.47
IFT140-205ENST00000561954 ZIK1Q3SY52 487 aaPredicted RBP12.1□□□□□ -0.47
IFT140-205ENST00000561954 CFAP77Q6ZQR2 320 aa12.1□□□□□ -0.47
IFT140-205ENST00000561954 DTX2Q86UW9 622 aa12.1□□□□□ -0.47
IFT140-205ENST00000561954 LINC00346Q8IVM7 164 aa12.1□□□□□ -0.47
IFT140-205ENST00000561954 MUC15Q8N387 334 aa12.1□□□□□ -0.47
IFT140-205ENST00000561954 ZNF454Q8N9F8 522 aa12.1□□□□□ -0.47
IFT140-205ENST00000561954 BBS1Q8NFJ9 593 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms