RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 HSF2Q03933 536 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 NFYCQ13952 458 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 UAP1Q16222 522 aaPredicted RBP4.31□□□□□ -1.72
HERC1-213ENST00000561359 GSTA3Q16772 222 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 ZNF404Q494X3 552 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 SLC36A2Q495M3 483 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 UNC50Q53HI1 259 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 FAM201AQ5SY85 155 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 ATAD3BQ5T9A4 648 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 ATG16L1Q676U5 607 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 TMEM200BQ69YZ2 307 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 TYW3Q6IPR3 259 aaKnown RBP4.31□□□□□ -1.72
HERC1-213ENST00000561359 KCTD18Q6PI47 426 aaPredicted RBP4.31□□□□□ -1.72
HERC1-213ENST00000561359 LYPD2Q6UXB3 125 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 ZNF841Q6ZN19 808 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 LHFPL2Q6ZUX7 228 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 CYS1Q717R9 158 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 SLC16A14Q7RTX9 510 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 VMO1Q7Z5L0 202 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 UEVLDQ8IX04 471 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 ZNF101Q8IZC7 436 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 RBM15BQ8NDT2 890 aaKnown RBP4.31□□□□□ -1.72
HERC1-213ENST00000561359 MFSD8Q8NHS3 518 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 ZNF420Q8TAQ5 688 aaPredicted RBP4.31□□□□□ -1.72
HERC1-213ENST00000561359 SFXN5Q8TD22 340 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 XAGE5Q8WWM1 108 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 OIT3Q8WWZ8 545 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 ISOC1Q96CN7 298 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 PBKQ96KB5 322 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 OR2V2Q96R30 315 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 PRR25Q96S07 402 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 DDOQ99489 341 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 SSX3Q99909 188 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 TRIM31Q9BZY9 425 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 FAM234AQ9H0X4 552 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 PCDHAC1Q9H158 963 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 MMADHCQ9H3L0 296 aaPredicted RBP4.31□□□□□ -1.72
HERC1-213ENST00000561359 LZTFL1Q9NQ48 299 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 BATF3Q9NR55 127 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 SERTAD4Q9NUC0 356 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 ERVK-18Q9QC07 812 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 DNAJB11Q9UBS4 358 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 IL19Q9UHD0 177 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 BAIAP2L1Q9UHR4 511 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 IGHV3-64DA0A0J9YX35 117 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 A0A1B0GVI7 797 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 A0A1B0GW55 424 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 C5orf49A4QMS7 147 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 LRRC30A6NM36 301 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 FTCDNL1E5RQL4 147 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 FAAHO00519 579 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 FBP2O00757 339 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 NPFFO15130 113 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 POLR3GO15318 223 aaPredicted RBP4.3□□□□□ -1.72
HERC1-213ENST00000561359 RAMP3O60896 148 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 CRCPO75575 148 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 C6orf47O95873 294 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 THY1P04216 161 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 DUX4L2P0CJ85 424 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 DUX4L3P0CJ86 424 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 DUX4L5P0CJ88 424 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 DUX4L6P0CJ89 424 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 DUX4L7P0CJ90 424 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 HLA-DOBP13765 273 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 NQO1P15559 274 aaKnown RBP4.3□□□□□ -1.72
HERC1-213ENST00000561359 SDC1P18827 310 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 NCF2P19878 526 aaPredicted RBP4.3□□□□□ -1.72
HERC1-213ENST00000561359 CBLP22681 906 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 STOMP27105 288 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 WNT5AP41221 380 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 ACAA2P42765 397 aaKnown RBP4.3□□□□□ -1.72
HERC1-213ENST00000561359 CSNK1A1P48729 337 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 PKNOX1P55347 436 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 COPZ1P61923 177 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 HPCAP84074 193 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 ROM1Q03395 351 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 PRB3Q04118 309 aaPredicted RBP4.3□□□□□ -1.72
HERC1-213ENST00000561359 EPS8Q12929 822 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 LSM12Q3MHD2 195 aaKnown RBP4.3□□□□□ -1.72
HERC1-213ENST00000561359 KHDC1LQ5JSQ8 128 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 ZNF678Q5SXM1 525 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 WBP2NLQ6ICG8 309 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 CRIP3Q6Q6R5 217 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 DUX4L9Q6RFH8 374 aaPredicted RBP4.3□□□□□ -1.72
HERC1-213ENST00000561359 DCDC5Q6ZRR9 648 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 CCDC121Q6ZUS5 278 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 RFPL4BQ6ZWI9 263 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 H1FNTQ75WM6 255 aaPredicted RBP4.3□□□□□ -1.72
HERC1-213ENST00000561359 DPPA2Q7Z7J5 298 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 TMEM139Q8IV31 216 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 C1orf87Q8N0U7 546 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 ATG16L2Q8NAA4 619 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 OR7A2PQ8NGA2 310 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 OR4K5Q8NGD3 323 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 SLC7A13Q8TCU3 470 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 C10orf82Q8WW14 230 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 OR5P2Q8WZ92 322 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 MOAP1Q96BY2 351 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 TXNDC15Q96J42 360 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 MAELQ96JY0 434 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms