RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	TNFSF8	P32971	234 aa		6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	NR4A2	P43354	598 aa		6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	EFNA4	P52798	201 aa		6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	SLC18A1	P54219	525 aa		6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	IL1RL1	Q01638	556 aa		6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	ROR2	Q01974	943 aa	Known RBP	6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	CHRNB3	Q05901	458 aa		6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	PAGE3	Q5JUK9	113 aa		6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	PHYHD1	Q5SRE7	291 aa		6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	BEND6	Q5SZJ8	279 aa	Predicted RBP	6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	C6orf52	Q5T4I8	152 aa		6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	CARD17	Q5XLA6	110 aa		6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	ZNF544	Q6NX49	715 aa		6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	KLHL24	Q6TFL4	600 aa		6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	MSANTD1	Q6ZTZ1	278 aa		6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	ZCCHC24	Q8N2G6	241 aa	Known RBP	6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	C17orf78	Q8N4C9	275 aa		6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	DPP10	Q8N608	796 aa		6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	MFSD8	Q8NHS3	518 aa		6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	MPLKIP	Q8TAP9	179 aa		6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	C10orf105	Q8TEF2	133 aa		6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	THOC1	Q96FV9	657 aa	Known RBP	6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	ZNF48	Q96MX3	618 aa	Predicted RBP	6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	FOXN4	Q96NZ1	517 aa		6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	SLC38A2	Q96QD8	506 aa		6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	CACYBP	Q9HB71	228 aa	Known RBP	6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	BCL2L10	Q9HD36	194 aa		6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	SLC52A3	Q9NQ40	469 aa		6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	DECR2	Q9NUI1	292 aa		6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	CCDC167	Q9P0B6	97 aa		6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	B3GAT1	Q9P2W7	334 aa		6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	IFT52	Q9Y366	437 aa		6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	NBEAL1	Q6ZS30	2694 aa		6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	ARFGEF3	Q5TH69	2177 aa		6.07	□□□□□ -1.44
MARK3-223	ENST00000561071	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	6.07	□□□□□ -1.44	1e-6	■■■■■ 38.5
MARK3-223	ENST00000561071	RNF212B	A8MTL3	300 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	C5orf58	C9J3I9	102 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	LRRN3	E7EW58	273 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	MS4A18	H0YCH9	400 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071		M0R3G1	203 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	TPST2	O60704	377 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	ZNF432	O94892	652 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	VAMP5	O95183	116 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	OR4A8	P0C604	315 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	IGHV4-31	P0DP07	118 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	HLA-DOB	P13765	273 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	ZNF43	P17038	809 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	GRPR	P30550	384 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	AQP5	P55064	265 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	DSCR9	P59020	149 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	UBE2N	P61088	152 aa	Known RBP	6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	NAAA	Q02083	359 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	LOXL1	Q08397	574 aa	Predicted RBP	6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	C1D	Q13901	141 aa	Known RBP	6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	GGTLC2	Q14390	218 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	ADIPOQ	Q15848	244 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	CEACAM16	Q2WEN9	425 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	MS4A18	Q3C1V0	323 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	CHRFAM7A	Q494W8	412 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	AGK	Q53H12	422 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	GCNT6	Q5T4J0	391 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	IL17REL	Q6ZVW7	336 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	SLC46A3	Q7Z3Q1	461 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	PHC2	Q8IXK0	858 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	BBS10	Q8TAM1	723 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	SLC25A28	Q96A46	364 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	SPDL1	Q96EA4	605 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	TXNDC15	Q96J42	360 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	EMC6	Q9BV81	110 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	ARMC7	Q9H6L4	198 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	CRLF2	Q9HC73	371 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	TCF7L2	Q9NQB0	619 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	CA10	Q9NS85	328 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	THUMPD1	Q9NXG2	353 aa	Known RBP	6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	VAPA	Q9P0L0	249 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	RPS6KB2	Q9UBS0	482 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	RASD1	Q9Y272	281 aa		6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	YLPM1	P49750	1951 aa	Known RBP	6.06	□□□□□ -1.44
MARK3-223	ENST00000561071	TRAV36DV7	A0A075B6V5	113 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	ARPC4-TTLL3	A0A0A6YYG9	625 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	IGHV4-61	A0A0C4DH41	118 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	TMEM129	A0AVI4	362 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	SH3PXD2B	A1X283	911 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	POLR3G	O15318	223 aa	Predicted RBP	6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	TRAF3IP2	O43734	574 aa	Predicted RBP	6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	SERPINI2	O75830	405 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	IGLV1-44	P01699	117 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	HLA-H	P01893	362 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	CRYAA	P02489	173 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	PSG1	P11464	419 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	CBR1	P16152	277 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	SLC25A16	P16260	332 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	USF1	P22415	310 aa	Predicted RBP	6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	GTF2E2	P29084	291 aa	Known RBP	6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	CAPZA2	P47755	286 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	IDH3G	P51553	393 aa	Predicted RBP	6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	CDH12	P55289	794 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	STX1B	P61266	288 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	SNRPD2	P62316	118 aa	Known RBP	6.05	□□□□□ -1.44

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