RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 PLGP00747 810 aaPredicted RBP14.86□□□□□ -0.03
TPM1-228ENST00000560975 DAOP14920 347 aa14.86□□□□□ -0.03
TPM1-228ENST00000560975 CAV2P51636 162 aa14.86□□□□□ -0.03
TPM1-228ENST00000560975 FCRL6Q6DN72 434 aa14.86□□□□□ -0.03
TPM1-228ENST00000560975 TMEM225Q6GV28 225 aa14.86□□□□□ -0.03
TPM1-228ENST00000560975 TRAPPC6BQ86SZ2 158 aa14.86□□□□□ -0.03
TPM1-228ENST00000560975 FJX1Q86VR8 437 aa14.86□□□□□ -0.03
TPM1-228ENST00000560975 NUDCD2Q8WVJ2 157 aa14.86□□□□□ -0.03
TPM1-228ENST00000560975 PRRT1Q99946 306 aa14.86□□□□□ -0.03
TPM1-228ENST00000560975 SEC61A2Q9H9S3 476 aa14.86□□□□□ -0.03
TPM1-228ENST00000560975 LRIT1Q9P2V4 623 aa14.86□□□□□ -0.03
TPM1-228ENST00000560975 A6NLC8 198 aa14.85□□□□□ -0.03
TPM1-228ENST00000560975 HRKO00198 91 aa14.85□□□□□ -0.03
TPM1-228ENST00000560975 NKX2-2O95096 273 aa14.85□□□□□ -0.03
TPM1-228ENST00000560975 ADH6P28332 368 aa14.85□□□□□ -0.03
TPM1-228ENST00000560975 LPAR6P43657 344 aa14.85□□□□□ -0.03
TPM1-228ENST00000560975 GPR18Q14330 331 aa14.85□□□□□ -0.03
TPM1-228ENST00000560975 ABHD13Q7L211 337 aa14.85□□□□□ -0.03
TPM1-228ENST00000560975 WFIKKN2Q8TEU8 576 aa14.85□□□□□ -0.03
TPM1-228ENST00000560975 ARL5BQ96KC2 179 aa14.85□□□□□ -0.03
TPM1-228ENST00000560975 NECAB3Q96P71 396 aaPredicted RBP14.85□□□□□ -0.03
TPM1-228ENST00000560975 INTS14Q96SY0 518 aa14.85□□□□□ -0.03
TPM1-228ENST00000560975 SULT4A1Q9BR01 284 aa14.85□□□□□ -0.03
TPM1-228ENST00000560975 TEX101Q9BY14 249 aa14.85□□□□□ -0.03
TPM1-228ENST00000560975 RNF122Q9H9V4 155 aa14.85□□□□□ -0.03
TPM1-228ENST00000560975 SLC17A5Q9NRA2 495 aa14.85□□□□□ -0.03
TPM1-228ENST00000560975 DTX4Q9Y2E6 619 aa14.85□□□□□ -0.03
TPM1-228ENST00000560975 SLC27A6Q9Y2P4 619 aa14.85□□□□□ -0.03
TPM1-228ENST00000560975 IGKV1D-42A0A075B6H8 117 aa14.85□□□□□ -0.03
TPM1-228ENST00000560975 NUDT19A8MXV4 375 aa14.85□□□□□ -0.03
TPM1-228ENST00000560975 GMFGO60234 142 aa14.85□□□□□ -0.03
TPM1-228ENST00000560975 OR10H2O60403 315 aa14.85□□□□□ -0.03
TPM1-228ENST00000560975 LRP3O75074 770 aa14.85□□□□□ -0.03
TPM1-228ENST00000560975 HTR3BO95264 441 aa14.85□□□□□ -0.03
TPM1-228ENST00000560975 EML2O95834 649 aa14.85□□□□□ -0.03
TPM1-228ENST00000560975 SNRNP70P08621 437 aaKnown RBP14.85□□□□□ -0.03
TPM1-228ENST00000560975 FOLR2P14207 255 aa14.85□□□□□ -0.03
TPM1-228ENST00000560975 HLA-GP17693 338 aa14.85□□□□□ -0.03
TPM1-228ENST00000560975 SLC25A1P53007 311 aa14.85□□□□□ -0.03
TPM1-228ENST00000560975 RPS4XP62701 263 aaKnown RBP14.85□□□□□ -0.03
TPM1-228ENST00000560975 FAM166AQ6J272 317 aa14.85□□□□□ -0.03
TPM1-228ENST00000560975 SUSD6Q92537 303 aa14.85□□□□□ -0.03
TPM1-228ENST00000560975 C20orf24Q9BUV8 137 aa14.85□□□□□ -0.03
TPM1-228ENST00000560975 SEBOXQ9HB31 216 aaPredicted RBP14.85□□□□□ -0.03
TPM1-228ENST00000560975 CLN5O75503 358 aa14.84□□□□□ -0.03
TPM1-228ENST00000560975 IL2RAP01589 272 aa14.84□□□□□ -0.03
TPM1-228ENST00000560975 TACR3P29371 465 aa14.84□□□□□ -0.03
TPM1-228ENST00000560975 HRH1P35367 487 aa14.84□□□□□ -0.03
TPM1-228ENST00000560975 ADPRHP54922 357 aa14.84□□□□□ -0.03
TPM1-228ENST00000560975 ENPP2Q13822 863 aa14.84□□□□□ -0.03
TPM1-228ENST00000560975 MESTQ5EB52 335 aa14.84□□□□□ -0.03
TPM1-228ENST00000560975 C9orf152Q5JTZ5 239 aa14.84□□□□□ -0.03
TPM1-228ENST00000560975 DHRS11Q6UWP2 260 aa14.84□□□□□ -0.03
TPM1-228ENST00000560975 MDGA2Q7Z553 956 aa14.84□□□□□ -0.03
TPM1-228ENST00000560975 C15orf54Q8N8G6 183 aa14.84□□□□□ -0.03
TPM1-228ENST00000560975 OR10G6Q8NH81 332 aa14.84□□□□□ -0.03
TPM1-228ENST00000560975 STARD5Q9NSY2 213 aa14.84□□□□□ -0.03
TPM1-228ENST00000560975 OR5AC2Q9NZP5 309 aa14.84□□□□□ -0.03
TPM1-228ENST00000560975 DPP7Q9UHL4 492 aa14.84□□□□□ -0.03
TPM1-228ENST00000560975 TBC1D3IA0A087WXS9 549 aa14.84□□□□□ -0.03
TPM1-228ENST00000560975 OTOL1A6NHN0 477 aaPredicted RBP14.84□□□□□ -0.03
TPM1-228ENST00000560975 EFSO43281 561 aa14.84□□□□□ -0.03
TPM1-228ENST00000560975 ADAP1O75689 374 aa14.84□□□□□ -0.03
TPM1-228ENST00000560975 IGHV2-70P01814 119 aa14.84□□□□□ -0.03
TPM1-228ENST00000560975 SGCAQ16586 387 aa14.84□□□□□ -0.03
TPM1-228ENST00000560975 OR4C3Q8NH37 302 aa14.84□□□□□ -0.03
TPM1-228ENST00000560975 FAM46BQ96A09 425 aa14.84□□□□□ -0.03
TPM1-228ENST00000560975 SLC25A44Q96H78 314 aaPredicted RBP14.84□□□□□ -0.03
TPM1-228ENST00000560975 SPACA7Q96KW9 195 aa14.84□□□□□ -0.03
TPM1-228ENST00000560975 OR2A5Q96R48 311 aa14.84□□□□□ -0.03
TPM1-228ENST00000560975 PARP12Q9H0J9 701 aaKnown RBP14.84□□□□□ -0.03
TPM1-228ENST00000560975 ZBP1Q9H171 429 aa14.84□□□□□ -0.03
TPM1-228ENST00000560975 RRAGCQ9HB90 399 aa14.84□□□□□ -0.03
TPM1-228ENST00000560975 PHPT1Q9NRX4 125 aaPredicted RBP14.84□□□□□ -0.03
TPM1-228ENST00000560975 CKLFQ9UBR5 152 aa14.84□□□□□ -0.03
TPM1-228ENST00000560975 MAFFQ9ULX9 164 aa14.84□□□□□ -0.03
TPM1-228ENST00000560975 hCG_1809904A0A1W2PP81 198 aa14.83□□□□□ -0.03
TPM1-228ENST00000560975 A0A1W2PR64 198 aa14.83□□□□□ -0.03
TPM1-228ENST00000560975 A0A1W2PRV1 198 aa14.83□□□□□ -0.03
TPM1-228ENST00000560975 EIF1AYO14602 144 aaKnown RBP14.83□□□□□ -0.03
TPM1-228ENST00000560975 RCC1P18754 421 aaPredicted RBP14.83□□□□□ -0.03
TPM1-228ENST00000560975 VIPR2P41587 438 aa14.83□□□□□ -0.03
TPM1-228ENST00000560975 EIF1AXP47813 144 aaKnown RBP14.83□□□□□ -0.03
TPM1-228ENST00000560975 MFGE8Q08431 387 aaPredicted RBP14.83□□□□□ -0.03
TPM1-228ENST00000560975 MEF2DQ14814 521 aa14.83□□□□□ -0.03
TPM1-228ENST00000560975 ADGRE4PQ86SQ3 457 aa14.83□□□□□ -0.03
TPM1-228ENST00000560975 NT5CQ8TCD5 201 aa14.83□□□□□ -0.03
TPM1-228ENST00000560975 MARCH1Q8TCQ1 289 aa14.83□□□□□ -0.03
TPM1-228ENST00000560975 WDR77Q9BQA1 342 aaPredicted RBP14.83□□□□□ -0.03
TPM1-228ENST00000560975 PAPOLGQ9BWT3 736 aaKnown RBP14.83□□□□□ -0.03
TPM1-228ENST00000560975 WBP1LQ9NX94 342 aa14.83□□□□□ -0.03
TPM1-228ENST00000560975 A0A1W2PPH5 198 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 MBTPS2O43462 519 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 CEACAM5P06731 702 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 ADH1AP07327 375 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 SMIM10L1P0DMW3 83 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 MAOAP21397 527 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 OR2B8PP59922 312 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 NAAAQ02083 359 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 SLC9A3R2Q15599 337 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms