RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 NDRG4Q9ULP0 352 aaKnown RBP15.51■□□□□ 0.07
TPM1-226ENST00000560959 SLC7A7Q9UM01 511 aa15.51■□□□□ 0.07
TPM1-226ENST00000560959 ANGPT4Q9Y264 503 aa15.51■□□□□ 0.07
TPM1-226ENST00000560959 CLPXO76031 633 aa15.5■□□□□ 0.07
TPM1-226ENST00000560959 COX5BP10606 129 aa15.5■□□□□ 0.07
TPM1-226ENST00000560959 HNRNPA0Q13151 305 aaKnown RBP15.5■□□□□ 0.07
TPM1-226ENST00000560959 BLOC1S3Q6QNY0 202 aa15.5■□□□□ 0.07
TPM1-226ENST00000560959 KLBQ86Z14 1044 aa15.5■□□□□ 0.07
TPM1-226ENST00000560959 FNDC8Q8TC99 324 aa15.5■□□□□ 0.07
TPM1-226ENST00000560959 ITLN1Q8WWA0 313 aa15.5■□□□□ 0.07
TPM1-226ENST00000560959 LIPHQ8WWY8 451 aa15.5■□□□□ 0.07
TPM1-226ENST00000560959 GCM1Q9NP62 436 aa15.5■□□□□ 0.07
TPM1-226ENST00000560959 MEPEQ9NQ76 525 aaPredicted RBP15.5■□□□□ 0.07
TPM1-226ENST00000560959 IGKV1D-43A0A0B4J1Z2 117 aa15.49■□□□□ 0.07
TPM1-226ENST00000560959 SLC22A31A6NKX4 558 aa15.49■□□□□ 0.07
TPM1-226ENST00000560959 KPNA4O00629 521 aaPredicted RBP15.49■□□□□ 0.07
TPM1-226ENST00000560959 ERLIN1O75477 346 aa15.49■□□□□ 0.07
TPM1-226ENST00000560959 MT-ND1P03886 318 aa15.49■□□□□ 0.07
TPM1-226ENST00000560959 RPS2P15880 293 aaKnown RBP15.49■□□□□ 0.07
TPM1-226ENST00000560959 FUT1P19526 365 aa15.49■□□□□ 0.07
TPM1-226ENST00000560959 GUCA1AP43080 201 aaPredicted RBP15.49■□□□□ 0.07
TPM1-226ENST00000560959 KRTAP10-3P60369 221 aa15.49■□□□□ 0.07
TPM1-226ENST00000560959 GPR157Q5UAW9 335 aa15.49■□□□□ 0.07
TPM1-226ENST00000560959 SLC27A4Q6P1M0 643 aa15.49■□□□□ 0.07
TPM1-226ENST00000560959 ZNF620Q6ZNG0 422 aa15.49■□□□□ 0.07
TPM1-226ENST00000560959 MAVSQ7Z434 540 aa15.49■□□□□ 0.07
TPM1-226ENST00000560959 FUNDC1Q8IVP5 155 aa15.49■□□□□ 0.07
TPM1-226ENST00000560959 MREGQ8N565 214 aa15.49■□□□□ 0.07
TPM1-226ENST00000560959 GPR32P1Q8NGA4 272 aa15.49■□□□□ 0.07
TPM1-226ENST00000560959 HDAC2Q92769 488 aaKnown RBP15.49■□□□□ 0.07
TPM1-226ENST00000560959 HAVCR1Q96D42 359 aa15.49■□□□□ 0.07
TPM1-226ENST00000560959 NEIL1Q96FI4 390 aaPredicted RBP15.49■□□□□ 0.07
TPM1-226ENST00000560959 COG8Q96MW5 612 aa15.49■□□□□ 0.07
TPM1-226ENST00000560959 OR2V2Q96R30 315 aa15.49■□□□□ 0.07
TPM1-226ENST00000560959 ALG12Q9BV10 488 aa15.49■□□□□ 0.07
TPM1-226ENST00000560959 CHIAQ9BZP6 476 aa15.49■□□□□ 0.07
TPM1-226ENST00000560959 RNF114Q9Y508 228 aa15.49■□□□□ 0.07
TPM1-226ENST00000560959 M0QX08 132 aa15.48■□□□□ 0.07
TPM1-226ENST00000560959 LAP3P28838 519 aa15.48■□□□□ 0.07
TPM1-226ENST00000560959 RBMXP38159 391 aaKnown RBP15.48■□□□□ 0.07
TPM1-226ENST00000560959 AQP2P41181 271 aa15.48■□□□□ 0.07
TPM1-226ENST00000560959 MMP16P51512 607 aa15.48■□□□□ 0.07
TPM1-226ENST00000560959 ZNF181Q2M3W8 571 aa15.48■□□□□ 0.07
TPM1-226ENST00000560959 PAGE3Q5JUK9 113 aa15.48■□□□□ 0.07
TPM1-226ENST00000560959 FOXL2NBQ6ZUU3 175 aa15.48■□□□□ 0.07
TPM1-226ENST00000560959 PTOV1Q86YD1 416 aa15.48■□□□□ 0.07
TPM1-226ENST00000560959 C11orf65Q8NCR3 313 aa15.48■□□□□ 0.07
TPM1-226ENST00000560959 DYRK2Q92630 601 aa15.48■□□□□ 0.07
TPM1-226ENST00000560959 NSMAFQ92636 917 aa15.48■□□□□ 0.07
TPM1-226ENST00000560959 RBP7Q96R05 134 aa15.48■□□□□ 0.07
TPM1-226ENST00000560959 PRSS27Q9BQR3 290 aa15.48■□□□□ 0.07
TPM1-226ENST00000560959 NUDT16L1Q9BRJ7 211 aaKnown RBP15.48■□□□□ 0.07
TPM1-226ENST00000560959 TXNIPQ9H3M7 391 aa15.48■□□□□ 0.07
TPM1-226ENST00000560959 IKZF5Q9H5V7 419 aa15.48■□□□□ 0.07
TPM1-226ENST00000560959 OR7A10O76100 309 aa15.47■□□□□ 0.07
TPM1-226ENST00000560959 ABHD16AO95870 558 aa15.47■□□□□ 0.07
TPM1-226ENST00000560959 RBM34P42696 430 aaKnown RBP15.47■□□□□ 0.07
TPM1-226ENST00000560959 WDR4P57081 412 aaKnown RBP15.47■□□□□ 0.07
TPM1-226ENST00000560959 STX1BP61266 288 aa15.47■□□□□ 0.07
TPM1-226ENST00000560959 CD47Q08722 323 aa15.47■□□□□ 0.07
TPM1-226ENST00000560959 BRD3OSQ6XYD6 125 aa15.47■□□□□ 0.07
TPM1-226ENST00000560959 NLRC3Q7RTR2 1065 aa15.47■□□□□ 0.07
TPM1-226ENST00000560959 TSPYL5Q86VY4 417 aaPredicted RBP15.47■□□□□ 0.07
TPM1-226ENST00000560959 RBM45Q8IUH3 476 aaKnown RBP15.47■□□□□ 0.07
TPM1-226ENST00000560959 FITM2Q8N6M3 262 aa15.47■□□□□ 0.07
TPM1-226ENST00000560959 OR4D11Q8NGI4 311 aa15.47■□□□□ 0.07
TPM1-226ENST00000560959 LINC01006Q8NI28 216 aa15.47■□□□□ 0.07
TPM1-226ENST00000560959 C10orf82Q8WW14 230 aa15.47■□□□□ 0.07
TPM1-226ENST00000560959 SSMEM1Q8WWF3 244 aa15.47■□□□□ 0.07
TPM1-226ENST00000560959 PTP4A1Q93096 173 aa15.47■□□□□ 0.07
TPM1-226ENST00000560959 CMBLQ96DG6 245 aa15.47■□□□□ 0.07
TPM1-226ENST00000560959 SPDL1Q96EA4 605 aa15.47■□□□□ 0.07
TPM1-226ENST00000560959 MARCH7Q9H992 704 aa15.47■□□□□ 0.07
TPM1-226ENST00000560959 C12orf71A8MTZ7 269 aa15.46■□□□□ 0.07
TPM1-226ENST00000560959 TNFRSF13BO14836 293 aaPredicted RBP15.46■□□□□ 0.07
TPM1-226ENST00000560959 ALX3O95076 343 aa15.46■□□□□ 0.07
TPM1-226ENST00000560959 MELTFP08582 738 aa15.46■□□□□ 0.07
TPM1-226ENST00000560959 CD247P20963 164 aa15.46■□□□□ 0.07
TPM1-226ENST00000560959 PROK1P58294 105 aa15.46■□□□□ 0.07
TPM1-226ENST00000560959 FMODQ06828 376 aa15.46■□□□□ 0.07
TPM1-226ENST00000560959 TTMPQ5BVD1 217 aa15.46■□□□□ 0.07
TPM1-226ENST00000560959 OR8B3Q8NGG8 313 aa15.46■□□□□ 0.07
TPM1-226ENST00000560959 TBC1D15Q8TC07 691 aa15.46■□□□□ 0.07
TPM1-226ENST00000560959 OR8B2Q96RD0 313 aa15.46■□□□□ 0.07
TPM1-226ENST00000560959 TMEM246Q9BRR3 403 aa15.46■□□□□ 0.07
TPM1-226ENST00000560959 RAC2P15153 192 aa15.45■□□□□ 0.06
TPM1-226ENST00000560959 FGF12P61328 243 aa15.45■□□□□ 0.06
TPM1-226ENST00000560959 GUCY1A3Q02108 690 aa15.45■□□□□ 0.06
TPM1-226ENST00000560959 ZNF404Q494X3 552 aa15.45■□□□□ 0.06
TPM1-226ENST00000560959 EPGNQ6UW88 154 aa15.45■□□□□ 0.06
TPM1-226ENST00000560959 PATL1Q86TB9 770 aaKnown RBP15.45■□□□□ 0.06
TPM1-226ENST00000560959 SLC30A8Q8IWU4 369 aa15.45■□□□□ 0.06
TPM1-226ENST00000560959 SGTBQ96EQ0 304 aa15.45■□□□□ 0.06
TPM1-226ENST00000560959 POFUT1Q9H488 388 aa15.45■□□□□ 0.06
TPM1-226ENST00000560959 TNFRSF19Q9NS68 423 aa15.45■□□□□ 0.06
TPM1-226ENST00000560959 KIF17Q9P2E2 1029 aa15.45■□□□□ 0.06
TPM1-226ENST00000560959 ASH2LQ9UBL3 628 aa15.45■□□□□ 0.06
TPM1-226ENST00000560959 STARD10Q9Y365 291 aa15.45■□□□□ 0.06
TPM1-226ENST00000560959 J3QW42 95 aa15.44■□□□□ 0.06
TPM1-226ENST00000560959 P2RY10O00398 339 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms