RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 SLC27A4Q6P1M0 643 aa14.91□□□□□ -0.02
TSPAN3-208ENST00000560514 NLRC3Q7RTR2 1065 aa14.91□□□□□ -0.02
TSPAN3-208ENST00000560514 KLBQ86Z14 1044 aa14.91□□□□□ -0.02
TSPAN3-208ENST00000560514 OR8B3Q8NGG8 313 aa14.91□□□□□ -0.02
TSPAN3-208ENST00000560514 VANGL1Q8TAA9 524 aaPredicted RBP14.91□□□□□ -0.02
TSPAN3-208ENST00000560514 TBC1D15Q8TC07 691 aa14.91□□□□□ -0.02
TSPAN3-208ENST00000560514 TSPEARQ8WU66 669 aa14.91□□□□□ -0.02
TSPAN3-208ENST00000560514 NSMAFQ92636 917 aa14.91□□□□□ -0.02
TSPAN3-208ENST00000560514 NEIL1Q96FI4 390 aaPredicted RBP14.91□□□□□ -0.02
TSPAN3-208ENST00000560514 OR8B2Q96RD0 313 aa14.91□□□□□ -0.02
TSPAN3-208ENST00000560514 NUDT16L1Q9BRJ7 211 aaKnown RBP14.91□□□□□ -0.02
TSPAN3-208ENST00000560514 KIR2DS1A0A191URI9 304 aa14.9□□□□□ -0.02
TSPAN3-208ENST00000560514 GMNCA6NCL1 334 aa14.9□□□□□ -0.02
TSPAN3-208ENST00000560514 CPSF4LA6NMK7 179 aaKnown RBP14.9□□□□□ -0.02
TSPAN3-208ENST00000560514 C3orf80F5H4A9 247 aa14.9□□□□□ -0.02
TSPAN3-208ENST00000560514 PIN1P1O15428 100 aa14.9□□□□□ -0.02
TSPAN3-208ENST00000560514 TRMUO75648 421 aaKnown RBP14.9□□□□□ -0.02
TSPAN3-208ENST00000560514 CLPXO76031 633 aa14.9□□□□□ -0.02
TSPAN3-208ENST00000560514 SLC2A10O95528 541 aa14.9□□□□□ -0.02
TSPAN3-208ENST00000560514 ABHD16AO95870 558 aa14.9□□□□□ -0.02
TSPAN3-208ENST00000560514 F13BP05160 661 aa14.9□□□□□ -0.02
TSPAN3-208ENST00000560514 MELTFP08582 738 aa14.9□□□□□ -0.02
TSPAN3-208ENST00000560514 NR2C1P13056 603 aa14.9□□□□□ -0.02
TSPAN3-208ENST00000560514 AQP1P29972 269 aa14.9□□□□□ -0.02
TSPAN3-208ENST00000560514 KRTAP10-3P60369 221 aa14.9□□□□□ -0.02
TSPAN3-208ENST00000560514 CD47Q08722 323 aa14.9□□□□□ -0.02
TSPAN3-208ENST00000560514 SCARB2Q14108 478 aa14.9□□□□□ -0.02
TSPAN3-208ENST00000560514 AGKQ53H12 422 aa14.9□□□□□ -0.02
TSPAN3-208ENST00000560514 RUNDC3AQ59EK9 446 aa14.9□□□□□ -0.02
TSPAN3-208ENST00000560514 DLEU7Q6UYE1 221 aa14.9□□□□□ -0.02
TSPAN3-208ENST00000560514 LINC00114Q6XXX2 140 aa14.9□□□□□ -0.02
TSPAN3-208ENST00000560514 NPEPL1Q8NDH3 523 aa14.9□□□□□ -0.02
TSPAN3-208ENST00000560514 SSMEM1Q8WWF3 244 aa14.9□□□□□ -0.02
TSPAN3-208ENST00000560514 ASB10Q8WXI3 467 aa14.9□□□□□ -0.02
TSPAN3-208ENST00000560514 DYRK2Q92630 601 aa14.9□□□□□ -0.02
TSPAN3-208ENST00000560514 MRPL13Q9BYD1 178 aaKnown RBP14.9□□□□□ -0.02
TSPAN3-208ENST00000560514 OR2H1Q9GZK4 316 aa14.9□□□□□ -0.02
TSPAN3-208ENST00000560514 HMGB1P1B2RPK0 211 aaPredicted RBP14.89□□□□□ -0.03
TSPAN3-208ENST00000560514 M0R3H8 397 aa14.89□□□□□ -0.03
TSPAN3-208ENST00000560514 ASAH2BP0C7U1 165 aa14.89□□□□□ -0.03
TSPAN3-208ENST00000560514 FGF12P61328 243 aa14.89□□□□□ -0.03
TSPAN3-208ENST00000560514 PCBD1P61457 104 aa14.89□□□□□ -0.03
TSPAN3-208ENST00000560514 ENTPD8Q5MY95 495 aa14.89□□□□□ -0.03
TSPAN3-208ENST00000560514 ZNF774Q6NX45 483 aa14.89□□□□□ -0.03
TSPAN3-208ENST00000560514 VASH1Q7L8A9 365 aaPredicted RBP14.89□□□□□ -0.03
TSPAN3-208ENST00000560514 PTOV1Q86YD1 416 aa14.89□□□□□ -0.03
TSPAN3-208ENST00000560514 DPP10Q8N608 796 aa14.89□□□□□ -0.03
TSPAN3-208ENST00000560514 ATG16L2Q8NAA4 619 aa14.89□□□□□ -0.03
TSPAN3-208ENST00000560514 LINC01006Q8NI28 216 aa14.89□□□□□ -0.03
TSPAN3-208ENST00000560514 DYDC1Q8WWB3 177 aa14.89□□□□□ -0.03
TSPAN3-208ENST00000560514 OR2V2Q96R30 315 aa14.89□□□□□ -0.03
TSPAN3-208ENST00000560514 WFDC6Q9BQY6 131 aa14.89□□□□□ -0.03
TSPAN3-208ENST00000560514 INIPQ9NRY2 104 aa14.89□□□□□ -0.03
TSPAN3-208ENST00000560514 INTS9Q9NV88 658 aaKnown RBP14.89□□□□□ -0.03
TSPAN3-208ENST00000560514 TIMM10BQ9Y5J6 103 aa14.89□□□□□ -0.03
TSPAN3-208ENST00000560514 ICMTO60725 284 aa14.88□□□□□ -0.03
TSPAN3-208ENST00000560514 ZNF205O95201 554 aa14.88□□□□□ -0.03
TSPAN3-208ENST00000560514 CSF1P09603 554 aa14.88□□□□□ -0.03
TSPAN3-208ENST00000560514 TUBG1P23258 451 aa14.88□□□□□ -0.03
TSPAN3-208ENST00000560514 MMP16P51512 607 aa14.88□□□□□ -0.03
TSPAN3-208ENST00000560514 ZNF133P52736 654 aaPredicted RBP14.88□□□□□ -0.03
TSPAN3-208ENST00000560514 METTL21CQ5VZV1 264 aa14.88□□□□□ -0.03
TSPAN3-208ENST00000560514 C10orf111Q8N326 155 aa14.88□□□□□ -0.03
TSPAN3-208ENST00000560514 SMYD1Q8NB12 490 aa14.88□□□□□ -0.03
TSPAN3-208ENST00000560514 NABP1Q96AH0 204 aa14.88□□□□□ -0.03
TSPAN3-208ENST00000560514 MPP4Q96JB8 637 aa14.88□□□□□ -0.03
TSPAN3-208ENST00000560514 SEPHS2Q99611 448 aa14.88□□□□□ -0.03
TSPAN3-208ENST00000560514 PCGF1Q9BSM1 259 aa14.88□□□□□ -0.03
TSPAN3-208ENST00000560514 WNT5BQ9H1J7 359 aa14.88□□□□□ -0.03
TSPAN3-208ENST00000560514 SMURF2Q9HAU4 748 aa14.88□□□□□ -0.03
TSPAN3-208ENST00000560514 TMEM165Q9HC07 324 aa14.88□□□□□ -0.03
TSPAN3-208ENST00000560514 GCM1Q9NP62 436 aa14.88□□□□□ -0.03
TSPAN3-208ENST00000560514 TUBG2Q9NRH3 451 aa14.88□□□□□ -0.03
TSPAN3-208ENST00000560514 CLN8Q9UBY8 286 aa14.88□□□□□ -0.03
TSPAN3-208ENST00000560514 NDRG4Q9ULP0 352 aaKnown RBP14.88□□□□□ -0.03
TSPAN3-208ENST00000560514 SLC7A7Q9UM01 511 aa14.88□□□□□ -0.03
TSPAN3-208ENST00000560514 ANGPT4Q9Y264 503 aa14.88□□□□□ -0.03
TSPAN3-208ENST00000560514 NDUFAF1Q9Y375 327 aa14.88□□□□□ -0.03
TSPAN3-208ENST00000560514 PITPNBP48739 271 aa14.87□□□□□ -0.03
TSPAN3-208ENST00000560514 UGT2B15P54855 530 aa14.87□□□□□ -0.03
TSPAN3-208ENST00000560514 PROK1P58294 105 aa14.87□□□□□ -0.03
TSPAN3-208ENST00000560514 RPL18Q07020 188 aaKnown RBP14.87□□□□□ -0.03
TSPAN3-208ENST00000560514 FAM27BQ5VT28 67 aa14.87□□□□□ -0.03
TSPAN3-208ENST00000560514 RUSC1-AS1Q66K80 236 aa14.87□□□□□ -0.03
TSPAN3-208ENST00000560514 Q6ZR03 302 aa14.87□□□□□ -0.03
TSPAN3-208ENST00000560514 SLC30A8Q8IWU4 369 aa14.87□□□□□ -0.03
TSPAN3-208ENST00000560514 C11orf65Q8NCR3 313 aa14.87□□□□□ -0.03
TSPAN3-208ENST00000560514 ADAMTS16Q8TE57 1224 aa14.87□□□□□ -0.03
TSPAN3-208ENST00000560514 CMBLQ96DG6 245 aa14.87□□□□□ -0.03
TSPAN3-208ENST00000560514 SIKE1Q9BRV8 207 aa14.87□□□□□ -0.03
TSPAN3-208ENST00000560514 IKZF5Q9H5V7 419 aa14.87□□□□□ -0.03
TSPAN3-208ENST00000560514 VIPAS39Q9H9C1 493 aa14.87□□□□□ -0.03
TSPAN3-208ENST00000560514 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.87□□□□□ -0.03
TSPAN3-208ENST00000560514 UGT2A1Q9Y4X1 527 aa14.87□□□□□ -0.03
TSPAN3-208ENST00000560514 C5orf63A6NC05 138 aa14.86□□□□□ -0.03
TSPAN3-208ENST00000560514 LRRC30A6NM36 301 aa14.86□□□□□ -0.03
TSPAN3-208ENST00000560514 ENSAO43768 121 aaKnown RBP14.86□□□□□ -0.03
TSPAN3-208ENST00000560514 GPR137BO60478 399 aa14.86□□□□□ -0.03
TSPAN3-208ENST00000560514 CYB5R3P00387 301 aaPredicted RBP14.86□□□□□ -0.03
TSPAN3-208ENST00000560514 CST2P09228 141 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms