RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 A0A0X1KG70 313 aa12.01□□□□□ -0.49
TPM1-223ENST00000560445 J3QLI3 93 aa12.01□□□□□ -0.49
TPM1-223ENST00000560445 IFNL4K9M1U5 179 aa12.01□□□□□ -0.49
TPM1-223ENST00000560445 DCTN3O75935 186 aa12.01□□□□□ -0.49
TPM1-223ENST00000560445 NCR1O76036 304 aa12.01□□□□□ -0.49
TPM1-223ENST00000560445 GAAP10253 952 aa12.01□□□□□ -0.49
TPM1-223ENST00000560445 TNFRSF1AP19438 455 aa12.01□□□□□ -0.49
TPM1-223ENST00000560445 GATA3P23771 443 aa12.01□□□□□ -0.49
TPM1-223ENST00000560445 COL8A2P25067 703 aa12.01□□□□□ -0.49
TPM1-223ENST00000560445 ALKBH6Q3KRA9 238 aa12.01□□□□□ -0.49
TPM1-223ENST00000560445 PHC2Q8IXK0 858 aa12.01□□□□□ -0.49
TPM1-223ENST00000560445 ZNF101Q8IZC7 436 aa12.01□□□□□ -0.49
TPM1-223ENST00000560445 OR4M2Q8NGB6 313 aa12.01□□□□□ -0.49
TPM1-223ENST00000560445 SLC25A40Q8TBP6 338 aa12.01□□□□□ -0.49
TPM1-223ENST00000560445 YIPF5Q969M3 257 aa12.01□□□□□ -0.49
TPM1-223ENST00000560445 FAM46AQ96IP4 442 aaKnown RBP12.01□□□□□ -0.49
TPM1-223ENST00000560445 RSRC1Q96IZ7 334 aaKnown RBP12.01□□□□□ -0.49
TPM1-223ENST00000560445 LRRC37BQ96QE4 947 aa12.01□□□□□ -0.49
TPM1-223ENST00000560445 NARFLQ9H6Q4 476 aa12.01□□□□□ -0.49
TPM1-223ENST00000560445 HIF1ANQ9NWT6 349 aa12.01□□□□□ -0.49
TPM1-223ENST00000560445 PLEK2Q9NYT0 353 aa12.01□□□□□ -0.49
TPM1-223ENST00000560445 NDUFAF4Q9P032 175 aa12.01□□□□□ -0.49
TPM1-223ENST00000560445 TMCC3Q9ULS5 477 aa12.01□□□□□ -0.49
TPM1-223ENST00000560445 ARL2BPQ9Y2Y0 163 aa12.01□□□□□ -0.49
TPM1-223ENST00000560445 FBN1P35555 2871 aaKnown RBP12.01□□□□□ -0.49
TPM1-223ENST00000560445 LOC100509620A0A075B734 347 aa12□□□□□ -0.49
TPM1-223ENST00000560445 IGKV1D-43A0A0B4J1Z2 117 aa12□□□□□ -0.49
TPM1-223ENST00000560445 OR6C6A6NF89 314 aa12□□□□□ -0.49
TPM1-223ENST00000560445 UNC119BA6NIH7 251 aa12□□□□□ -0.49
TPM1-223ENST00000560445 CDC42EP2O14613 210 aa12□□□□□ -0.49
TPM1-223ENST00000560445 IMPA2O14732 288 aa12□□□□□ -0.49
TPM1-223ENST00000560445 CDC14BO60729 498 aa12□□□□□ -0.49
TPM1-223ENST00000560445 CD55P08174 381 aa12□□□□□ -0.49
TPM1-223ENST00000560445 HSD17B1P14061 328 aa12□□□□□ -0.49
TPM1-223ENST00000560445 NCK1P16333 377 aa12□□□□□ -0.49
TPM1-223ENST00000560445 SLC6A6P31641 620 aa12□□□□□ -0.49
TPM1-223ENST00000560445 IL2RGP31785 369 aa12□□□□□ -0.49
TPM1-223ENST00000560445 WNT5AP41221 380 aa12□□□□□ -0.49
TPM1-223ENST00000560445 ERVS71-1P61550 626 aa12□□□□□ -0.49
TPM1-223ENST00000560445 GNGT1P63211 74 aa12□□□□□ -0.49
TPM1-223ENST00000560445 GLO1Q04760 184 aa12□□□□□ -0.49
TPM1-223ENST00000560445 ENDOGQ14249 297 aaKnown RBP12□□□□□ -0.49
TPM1-223ENST00000560445 TSTQ16762 297 aaKnown RBP12□□□□□ -0.49
TPM1-223ENST00000560445 MESTQ5EB52 335 aa12□□□□□ -0.49
TPM1-223ENST00000560445 MTX3Q5HYI7 312 aa12□□□□□ -0.49
TPM1-223ENST00000560445 ZNF774Q6NX45 483 aa12□□□□□ -0.49
TPM1-223ENST00000560445 SLC27A4Q6P1M0 643 aa12□□□□□ -0.49
TPM1-223ENST00000560445 SMARCD3Q6STE5 483 aa12□□□□□ -0.49
TPM1-223ENST00000560445 C16orf89Q6UX73 402 aa12□□□□□ -0.49
TPM1-223ENST00000560445 RINLQ6ZS11 566 aa12□□□□□ -0.49
TPM1-223ENST00000560445 IL17RELQ6ZVW7 336 aa12□□□□□ -0.49
TPM1-223ENST00000560445 RFPL4BQ6ZWI9 263 aa12□□□□□ -0.49
TPM1-223ENST00000560445 FAM122BQ7Z309 247 aa12□□□□□ -0.49
TPM1-223ENST00000560445 JAZF1Q86VZ6 243 aa12□□□□□ -0.49
TPM1-223ENST00000560445 Q96M85 177 aa12□□□□□ -0.49
TPM1-223ENST00000560445 NSMCE2Q96MF7 247 aa12□□□□□ -0.49
TPM1-223ENST00000560445 OR2J1Q9GZK6 312 aa12□□□□□ -0.49
TPM1-223ENST00000560445 ZNF665Q9H7R5 613 aa12□□□□□ -0.49
TPM1-223ENST00000560445 NRIP3Q9NQ35 241 aa12□□□□□ -0.49
TPM1-223ENST00000560445 TREM2Q9NZC2 230 aa12□□□□□ -0.49
TPM1-223ENST00000560445 VSX1Q9NZR4 365 aaPredicted RBP12□□□□□ -0.49
TPM1-223ENST00000560445 EGFL7Q9UHF1 273 aa12□□□□□ -0.49
TPM1-223ENST00000560445 SIGLEC7Q9Y286 467 aa12□□□□□ -0.49
TPM1-223ENST00000560445 ADAM18Q9Y3Q7 739 aa12□□□□□ -0.49
TPM1-223ENST00000560445 DNHD1Q96M86 4753 aa11.99□□□□□ -0.49
TPM1-223ENST00000560445 SPRY3O43610 288 aa11.99□□□□□ -0.49
TPM1-223ENST00000560445 IDH3BO43837 385 aa11.99□□□□□ -0.49
TPM1-223ENST00000560445 SLC16A7O60669 478 aa11.99□□□□□ -0.49
TPM1-223ENST00000560445 GADD45GO95257 159 aa11.99□□□□□ -0.49
TPM1-223ENST00000560445 TXNDC12O95881 172 aa11.99□□□□□ -0.49
TPM1-223ENST00000560445 PNPP00491 289 aa11.99□□□□□ -0.49
TPM1-223ENST00000560445 RENP00797 406 aa11.99□□□□□ -0.49
TPM1-223ENST00000560445 IGHV1-46P01743 117 aa11.99□□□□□ -0.49
TPM1-223ENST00000560445 LIMS1P48059 325 aa11.99□□□□□ -0.49
TPM1-223ENST00000560445 MMP15P51511 669 aa11.99□□□□□ -0.49
TPM1-223ENST00000560445 MXRA7P84157 204 aa11.99□□□□□ -0.49
TPM1-223ENST00000560445 FHL1Q13642 323 aa11.99□□□□□ -0.49
TPM1-223ENST00000560445 SLC36A3Q495N2 470 aa11.99□□□□□ -0.49
TPM1-223ENST00000560445 SPATA46Q5T0L3 261 aa11.99□□□□□ -0.49
TPM1-223ENST00000560445 RPL13AP3Q6NVV1 102 aa11.99□□□□□ -0.49
TPM1-223ENST00000560445 TBPL2Q6SJ96 375 aa11.99□□□□□ -0.49
TPM1-223ENST00000560445 PGAM4Q8N0Y7 254 aa11.99□□□□□ -0.49
TPM1-223ENST00000560445 LINC00471Q8N535 108 aa11.99□□□□□ -0.49
TPM1-223ENST00000560445 FANK1Q8TC84 345 aa11.99□□□□□ -0.49
TPM1-223ENST00000560445 ST7LQ8TDW4 575 aa11.99□□□□□ -0.49
TPM1-223ENST00000560445 ZNF418Q8TF45 676 aaPredicted RBP11.99□□□□□ -0.49
TPM1-223ENST00000560445 ZFAND2BQ8WV99 257 aa11.99□□□□□ -0.49
TPM1-223ENST00000560445 RASD2Q96D21 266 aa11.99□□□□□ -0.49
TPM1-223ENST00000560445 PYURFQ96I23 114 aa11.99□□□□□ -0.49
TPM1-223ENST00000560445 DHRS1Q96LJ7 313 aa11.99□□□□□ -0.49
TPM1-223ENST00000560445 JMJD8Q96S16 334 aa11.99□□□□□ -0.49
TPM1-223ENST00000560445 GAL3ST1Q99999 423 aa11.99□□□□□ -0.49
TPM1-223ENST00000560445 SOX7Q9BT81 388 aa11.99□□□□□ -0.49
TPM1-223ENST00000560445 HDHD2Q9H0R4 259 aa11.99□□□□□ -0.49
TPM1-223ENST00000560445 SYT4Q9H2B2 425 aa11.99□□□□□ -0.49
TPM1-223ENST00000560445 GMPR2Q9P2T1 348 aaKnown RBP11.99□□□□□ -0.49
TPM1-223ENST00000560445 H7C1C5 153 aa11.98□□□□□ -0.49
TPM1-223ENST00000560445 FABP3P05413 133 aa11.98□□□□□ -0.49
TPM1-223ENST00000560445 CPT2P23786 658 aa11.98□□□□□ -0.49
TPM1-223ENST00000560445 FPR3P25089 353 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms