RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 FMODQ06828 376 aa15.83■□□□□ 0.12
SNX1-208ENST00000559844 WDR38Q5JTN6 314 aa15.83■□□□□ 0.12
SNX1-208ENST00000559844 TMEM225Q6GV28 225 aa15.83■□□□□ 0.12
SNX1-208ENST00000559844 SYT9Q86SS6 491 aa15.83■□□□□ 0.12
SNX1-208ENST00000559844 PRSS35Q8N3Z0 413 aa15.83■□□□□ 0.12
SNX1-208ENST00000559844 ITPR1Q14643 2758 aa15.83■□□□□ 0.12
SNX1-208ENST00000559844 TRBV5-7A0A0A0MS05 114 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 A0A0G2JMP0 313 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 A0A0X1KG70 313 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 SULT2B1O00204 365 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 CDK2AP1O14519 115 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 CBR3O75828 277 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 IGHG1P01857 330 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 SNRPBP14678 240 aaKnown RBP15.82■□□□□ 0.12
SNX1-208ENST00000559844 ZNF17P17021 662 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 SFTPDP35247 375 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 KIR3DL2P43630 455 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 CLRN1P58418 232 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 PITPNAQ00169 270 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 HACD4Q5VWC8 232 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 TIGD3Q6B0B8 471 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 IGFL3Q6UXB1 125 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 TMPPEQ6ZT21 453 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 GLB1L2Q8IW92 636 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 ZADH2Q8N4Q0 377 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 CELF2-AS1Q8N7Q2 184 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 MDS2Q8NDY4 140 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 IL17RDQ8NFM7 739 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 OR4M2Q8NGB6 313 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 MRPL13Q9BYD1 178 aaKnown RBP15.82■□□□□ 0.12
SNX1-208ENST00000559844 SLC25A18Q9H1K4 315 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 NPAP1Q9NZP6 1156 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 CACNA1BQ00975 2339 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 BOD1L1Q8NFC6 3051 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 A0A1B0GTH9 108 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 AQP7P3A6NL99 342 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 IFITM5A6NNB3 132 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 PLA2G10O15496 165 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 OPN1LWP04000 364 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 P04436 131 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 MAP2K3P46734 347 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 TNFSF10P50591 281 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 GPR85P60893 370 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 FOXK1P85037 733 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 C19orf57Q0VDD7 668 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 UBE2NLQ5JXB2 153 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 DEGS2Q6QHC5 323 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 STAC2Q6ZMT1 411 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 NOXO1Q8NFA2 376 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 OR10H5Q8NGA6 315 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 OR5H6Q8NGV6 325 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 SLC25A44Q96H78 314 aaPredicted RBP15.82■□□□□ 0.12
SNX1-208ENST00000559844 NEDD4LQ96PU5 975 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 WACQ9BTA9 647 aa15.82■□□□□ 0.12
SNX1-208ENST00000559844 MPZL1O95297 269 aa15.81■□□□□ 0.12
SNX1-208ENST00000559844 ZNF43P17038 809 aa15.81■□□□□ 0.12
SNX1-208ENST00000559844 SOX2P48431 317 aa15.81■□□□□ 0.12
SNX1-208ENST00000559844 RAET1LQ5VY80 246 aa15.81■□□□□ 0.12
SNX1-208ENST00000559844 ASB18Q6ZVZ8 466 aa15.81■□□□□ 0.12
SNX1-208ENST00000559844 SPATC1Q76KD6 591 aa15.81■□□□□ 0.12
SNX1-208ENST00000559844 ZNF433Q8N7K0 673 aaPredicted RBP15.81■□□□□ 0.12
SNX1-208ENST00000559844 OR6X1Q8NH79 312 aa15.81■□□□□ 0.12
SNX1-208ENST00000559844 ENKURQ8TC29 256 aa15.81■□□□□ 0.12
SNX1-208ENST00000559844 ZC3HAV1LQ96H79 300 aaKnown RBP15.81■□□□□ 0.12
SNX1-208ENST00000559844 JSRP1Q96MG2 331 aaPredicted RBP15.81■□□□□ 0.12
SNX1-208ENST00000559844 EMC6Q9BV81 110 aa15.81■□□□□ 0.12
SNX1-208ENST00000559844 HES7Q9BYE0 225 aa15.81■□□□□ 0.12
SNX1-208ENST00000559844 ZNF71Q9NQZ8 489 aaPredicted RBP15.81■□□□□ 0.12
SNX1-208ENST00000559844 TUBD1Q9UJT1 453 aa15.81■□□□□ 0.12
SNX1-208ENST00000559844 LRP12Q9Y561 859 aa15.81■□□□□ 0.12
SNX1-208ENST00000559844 G3V3Y1 287 aa15.8■□□□□ 0.12
SNX1-208ENST00000559844 TRAF3IP2O43734 574 aaPredicted RBP15.8■□□□□ 0.12
SNX1-208ENST00000559844 EIF1BO60739 113 aaKnown RBP15.8■□□□□ 0.12
SNX1-208ENST00000559844 UBL3O95164 117 aa15.8■□□□□ 0.12
SNX1-208ENST00000559844 CALCBP10092 127 aa15.8■□□□□ 0.12
SNX1-208ENST00000559844 OTPQ5XKR4 325 aa15.8■□□□□ 0.12
SNX1-208ENST00000559844 OR7E24Q6IFN5 339 aa15.8■□□□□ 0.12
SNX1-208ENST00000559844 GPAT4Q86UL3 456 aa15.8■□□□□ 0.12
SNX1-208ENST00000559844 CATSPERDQ86XM0 798 aa15.8■□□□□ 0.12
SNX1-208ENST00000559844 WDFY1Q8IWB7 410 aa15.8■□□□□ 0.12
SNX1-208ENST00000559844 RDH10Q8IZV5 341 aa15.8■□□□□ 0.12
SNX1-208ENST00000559844 TSEN15Q8WW01 171 aaKnown RBP15.8■□□□□ 0.12
SNX1-208ENST00000559844 HPS1Q92902 700 aa15.8■□□□□ 0.12
SNX1-208ENST00000559844 RFT1Q96AA3 541 aa15.8■□□□□ 0.12
SNX1-208ENST00000559844 GNRHR2Q96P88 292 aa15.8■□□□□ 0.12
SNX1-208ENST00000559844 GFI1Q99684 422 aa15.8■□□□□ 0.12
SNX1-208ENST00000559844 HDHD2Q9H0R4 259 aa15.8■□□□□ 0.12
SNX1-208ENST00000559844 EPG5Q9HCE0 2579 aa15.8■□□□□ 0.12
SNX1-208ENST00000559844 R4GMQ9 66 aa15.8■□□□□ 0.12
SNX1-208ENST00000559844 GJE1A6NN92 205 aa15.8■□□□□ 0.12
SNX1-208ENST00000559844 SLC43A1O75387 559 aa15.8■□□□□ 0.12
SNX1-208ENST00000559844 PGA4P0DJD7 388 aa15.8■□□□□ 0.12
SNX1-208ENST00000559844 PGA3P0DJD8 388 aa15.8■□□□□ 0.12
SNX1-208ENST00000559844 NR2C1P13056 603 aa15.8■□□□□ 0.12
SNX1-208ENST00000559844 CD46P15529 392 aa15.8■□□□□ 0.12
SNX1-208ENST00000559844 LAP3P28838 519 aa15.8■□□□□ 0.12
SNX1-208ENST00000559844 MAGEB1P43366 347 aa15.8■□□□□ 0.12
SNX1-208ENST00000559844 DCXRQ7Z4W1 244 aa15.8■□□□□ 0.12
SNX1-208ENST00000559844 AKAP14Q86UN6 197 aa15.8■□□□□ 0.12
SNX1-208ENST00000559844 LGALS14Q8TCE9 139 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms