RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 ERGIC3Q9Y282 383 aa9.14□□□□□ -0.95
TPM1-221ENST00000559831 HIVEP3Q5T1R4 2406 aa9.14□□□□□ -0.95
TPM1-221ENST00000559831 KMT2BQ9UMN6 2715 aaPredicted RBP9.14□□□□□ -0.95
TPM1-221ENST00000559831 A0A1W2PR80 420 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 PRR32B1ATL7 298 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 PYCARD-AS1I3L0S3 204 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 J3QLW9 94 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 RER1O15258 196 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 WNT11O96014 354 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 PTHP01270 115 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 HLA-HP01893 362 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 ZNF19P17023 458 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 ZNF32P17041 273 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 ALOX5APP20292 161 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 CHRNB4P30926 498 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 PCBD1P61457 104 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 EMX1Q04741 257 aaPredicted RBP9.13□□□□□ -0.95
TPM1-221ENST00000559831 GALEQ14376 348 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 IRF3Q14653 427 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 TAF13Q15543 124 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 NEDD8Q15843 81 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 GABRA6Q16445 453 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 PCK2Q16822 640 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 SLC25A35Q3KQZ1 300 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 SLC36A2Q495M3 483 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 NRN1LQ496H8 165 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 SFRP5Q5T4F7 317 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 OR2G6Q5TZ20 316 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 TMEM53Q6P2H8 277 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 KCTD18Q6PI47 426 aaPredicted RBP9.13□□□□□ -0.95
TPM1-221ENST00000559831 LRRN1Q6UXK5 716 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 TMPRSS11AQ6ZMR5 421 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 CFAP77Q6ZQR2 320 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 KCTD8Q6ZWB6 473 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 ZNF627Q7L945 461 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 FAM220AQ7Z4H9 259 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 KRT77Q7Z794 578 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 NANOGP1Q8N7R0 232 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 YIPF7Q8N8F6 280 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 GJC3Q8NFK1 279 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 OR52N5Q8NH56 324 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 FGFBP3Q8TAT2 258 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 SPRYD4Q8WW59 207 aaPredicted RBP9.13□□□□□ -0.95
TPM1-221ENST00000559831 ASB17Q8WXJ9 295 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 SLAMF6Q96DU3 332 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 MAP6Q96JE9 813 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 JAM3Q9BX67 310 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 CDCA4Q9BXL8 241 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 VCX3AQ9NNX9 186 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 SLCO1C1Q9NYB5 712 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 SCOCQ9UIL1 159 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 GNG8Q9UK08 70 aa9.13□□□□□ -0.95
TPM1-221ENST00000559831 TMEM129A0AVI4 362 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 NKX2-6A6NCS4 301 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 ZNF503-AS2A6NEH8 195 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 DOK2O60496 412 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 RPP14O95059 124 aaKnown RBP9.12□□□□□ -0.95
TPM1-221ENST00000559831 UBL3O95164 117 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 KRT8P05787 483 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 LCKP06239 509 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 H2BFMP0C1H6 154 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 ASCL1P50553 236 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 OR12D2P58182 307 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 ACTA2P62736 377 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 ACTG2P63267 376 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 EGR3Q06889 387 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 FAM27E3Q08E93 113 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 SCRN3Q0VDG4 424 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 MED22Q15528 200 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 TBCEQ15813 527 aaPredicted RBP9.12□□□□□ -0.95
TPM1-221ENST00000559831 CCDC92Q53HC0 331 aaPredicted RBP9.12□□□□□ -0.95
TPM1-221ENST00000559831 ELFN2Q5R3F8 820 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 RNLSQ5VYX0 342 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 OR7E24Q6IFN5 339 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 ALKBH2Q6NS38 261 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 ZNF774Q6NX45 483 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 STAC2Q6ZMT1 411 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 PLEKHG7Q6ZR37 379 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 C1orf162Q8NEQ5 155 aaPredicted RBP9.12□□□□□ -0.95
TPM1-221ENST00000559831 AKR7LQ8NHP1 331 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 ST7LQ8TDW4 575 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 CA5BP1Q8WTZ4 195 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 GATAD2BQ8WXI9 593 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 C4orf36Q96KX1 117 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 OR5M11Q96RB7 305 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 OR8B4Q96RC9 309 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 MYCBPQ99417 103 aaPredicted RBP9.12□□□□□ -0.95
TPM1-221ENST00000559831 ZNF649Q9BS31 505 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 OR2H1Q9GZK4 316 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 ISG20L2Q9H9L3 353 aaKnown RBP9.12□□□□□ -0.95
TPM1-221ENST00000559831 ELOVL3Q9HB03 270 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 NOX3Q9HBY0 568 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 ACOT13Q9NPJ3 140 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 SLC17A5Q9NRA2 495 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 ELOVL5Q9NYP7 299 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 PLEK2Q9NYT0 353 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 ZNF224Q9NZL3 707 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 JKAMPQ9P055 326 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 SLC5A6Q9Y289 635 aa9.12□□□□□ -0.95
TPM1-221ENST00000559831 CAB39Q9Y376 341 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms