RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 CDC20BQ86Y33 519 aa18.8■□□□□ 0.6
SNX1-206ENST00000559389 TIGD4Q8IY51 512 aa18.8■□□□□ 0.6
SNX1-206ENST00000559389 DEPDC4Q8N2C3 294 aa18.8■□□□□ 0.6
SNX1-206ENST00000559389 PIAS4Q8N2W9 510 aaPredicted RBP18.8■□□□□ 0.6
SNX1-206ENST00000559389 CPEB3Q8NE35 698 aaKnown RBP18.8■□□□□ 0.6
SNX1-206ENST00000559389 RADILQ96JH8 1075 aa18.8■□□□□ 0.6
SNX1-206ENST00000559389 HECTD1Q9ULT8 2610 aa18.79■□□□□ 0.6
SNX1-206ENST00000559389 SGCEO43556 437 aa18.79■□□□□ 0.6
SNX1-206ENST00000559389 PTHP01270 115 aa18.79■□□□□ 0.6
SNX1-206ENST00000559389 SPARCP09486 303 aa18.79■□□□□ 0.6
SNX1-206ENST00000559389 APEX1P27695 318 aaKnown RBP18.79■□□□□ 0.6
SNX1-206ENST00000559389 RPS27P42677 84 aaKnown RBP18.79■□□□□ 0.6
SNX1-206ENST00000559389 SNRPGP62308 76 aaKnown RBP18.79■□□□□ 0.6
SNX1-206ENST00000559389 RAB35Q15286 201 aa18.79■□□□□ 0.6
SNX1-206ENST00000559389 CCDC92Q53HC0 331 aaPredicted RBP18.79■□□□□ 0.6
SNX1-206ENST00000559389 SLC22A25Q6T423 547 aa18.79■□□□□ 0.6
SNX1-206ENST00000559389 B3GLCTQ6Y288 498 aa18.79■□□□□ 0.6
SNX1-206ENST00000559389 VASH1Q7L8A9 365 aaPredicted RBP18.79■□□□□ 0.6
SNX1-206ENST00000559389 SLC30A7Q8NEW0 376 aa18.79■□□□□ 0.6
SNX1-206ENST00000559389 IL17RDQ8NFM7 739 aa18.79■□□□□ 0.6
SNX1-206ENST00000559389 UBE2FQ969M7 185 aa18.79■□□□□ 0.6
SNX1-206ENST00000559389 ZNF582Q96NG8 517 aaPredicted RBP18.79■□□□□ 0.6
SNX1-206ENST00000559389 KCNS3Q9BQ31 491 aa18.79■□□□□ 0.6
SNX1-206ENST00000559389 ADI1Q9BV57 179 aa18.79■□□□□ 0.6
SNX1-206ENST00000559389 DNAJC27Q9NZQ0 273 aa18.79■□□□□ 0.6
SNX1-206ENST00000559389 GDF2Q9UK05 429 aaPredicted RBP18.79■□□□□ 0.6
SNX1-206ENST00000559389 RAI1Q7Z5J4 1906 aaPredicted RBP18.78■□□□□ 0.6
SNX1-206ENST00000559389 SLC22A31A6NKX4 558 aa18.78■□□□□ 0.6
SNX1-206ENST00000559389 SELENOFO60613 162 aa18.78■□□□□ 0.6
SNX1-206ENST00000559389 COX5BP10606 129 aa18.78■□□□□ 0.6
SNX1-206ENST00000559389 ZNF35P13682 527 aa18.78■□□□□ 0.6
SNX1-206ENST00000559389 GABRB1P18505 474 aa18.78■□□□□ 0.6
SNX1-206ENST00000559389 CDH11P55287 796 aa18.78■□□□□ 0.6
SNX1-206ENST00000559389 ADARB1P78563 741 aaKnown RBP18.78■□□□□ 0.6
SNX1-206ENST00000559389 GGTLC2Q14390 218 aa18.78■□□□□ 0.6
SNX1-206ENST00000559389 SLC25A30Q5SVS4 291 aa18.78■□□□□ 0.6
SNX1-206ENST00000559389 MEPCEQ7L2J0 689 aaKnown RBP18.78■□□□□ 0.6
SNX1-206ENST00000559389 ERI1Q8IV48 349 aaKnown RBP18.78■□□□□ 0.6
SNX1-206ENST00000559389 ENTHD1Q8IYW4 607 aa18.78■□□□□ 0.6
SNX1-206ENST00000559389 ALDH16A1Q8IZ83 802 aa18.78■□□□□ 0.6
SNX1-206ENST00000559389 DHRSXQ8N5I4 330 aa18.78■□□□□ 0.6
SNX1-206ENST00000559389 GJC3Q8NFK1 279 aa18.78■□□□□ 0.6
SNX1-206ENST00000559389 OR6N2Q8NGY6 317 aa18.78■□□□□ 0.6
SNX1-206ENST00000559389 LILRB1Q8NHL6 650 aaPredicted RBP18.78■□□□□ 0.6
SNX1-206ENST00000559389 CYGBQ8WWM9 190 aa18.78■□□□□ 0.6
SNX1-206ENST00000559389 POM121L2Q96KW2 1035 aa18.78■□□□□ 0.6
SNX1-206ENST00000559389 TEAD3Q99594 435 aa18.78■□□□□ 0.6
SNX1-206ENST00000559389 CDADC1Q9BWV3 514 aa18.78■□□□□ 0.6
SNX1-206ENST00000559389 HDHD2Q9H0R4 259 aa18.78■□□□□ 0.6
SNX1-206ENST00000559389 VCX3BQ9H321 246 aa18.78■□□□□ 0.6
SNX1-206ENST00000559389 PLEK2Q9NYT0 353 aa18.78■□□□□ 0.6
SNX1-206ENST00000559389 ATPIF1Q9UII2 106 aa18.78■□□□□ 0.6
SNX1-206ENST00000559389 OR6C6A6NF89 314 aa18.77■□□□□ 0.6
SNX1-206ENST00000559389 H0YJX3 145 aa18.77■□□□□ 0.6
SNX1-206ENST00000559389 SYNGR3O43761 229 aa18.77■□□□□ 0.6
SNX1-206ENST00000559389 STOMP27105 288 aa18.77■□□□□ 0.6
SNX1-206ENST00000559389 APLNRP35414 380 aa18.77■□□□□ 0.6
SNX1-206ENST00000559389 HTR5AP47898 357 aa18.77■□□□□ 0.6
SNX1-206ENST00000559389 AQP4P55087 323 aa18.77■□□□□ 0.6
SNX1-206ENST00000559389 TBC1D28Q2M2D7 210 aa18.77■□□□□ 0.6
SNX1-206ENST00000559389 TTC23Q5W5X9 447 aa18.77■□□□□ 0.6
SNX1-206ENST00000559389 OR2AJ1Q8NGZ0 328 aa18.77■□□□□ 0.6
SNX1-206ENST00000559389 NEUROG1Q92886 237 aa18.77■□□□□ 0.6
SNX1-206ENST00000559389 MAP6Q96JE9 813 aa18.77■□□□□ 0.6
SNX1-206ENST00000559389 APOL4Q9BPW4 351 aa18.77■□□□□ 0.6
SNX1-206ENST00000559389 PLEKHF2Q9H8W4 249 aa18.77■□□□□ 0.6
SNX1-206ENST00000559389 PNRC2Q9NPJ4 139 aaKnown RBP18.77■□□□□ 0.6
SNX1-206ENST00000559389 H2AFY2Q9P0M6 372 aaPredicted RBP18.77■□□□□ 0.6
SNX1-206ENST00000559389 LOC100509620A0A075B734 347 aa18.76■□□□□ 0.59
SNX1-206ENST00000559389 H0YAE9 185 aa18.76■□□□□ 0.59
SNX1-206ENST00000559389 ZNF593O00488 134 aaPredicted RBP18.76■□□□□ 0.59
SNX1-206ENST00000559389 MPZL2O60487 215 aa18.76■□□□□ 0.59
SNX1-206ENST00000559389 TMCC2O75069 709 aa18.76■□□□□ 0.59
SNX1-206ENST00000559389 CCL2P13500 99 aa18.76■□□□□ 0.59
SNX1-206ENST00000559389 HTR1FP30939 366 aa18.76■□□□□ 0.59
SNX1-206ENST00000559389 CAPGP40121 348 aa18.76■□□□□ 0.59
SNX1-206ENST00000559389 NAA10P41227 235 aaPredicted RBP18.76■□□□□ 0.59
SNX1-206ENST00000559389 KRTAP10-9P60411 292 aa18.76■□□□□ 0.59
SNX1-206ENST00000559389 HGFACQ04756 655 aa18.76■□□□□ 0.59
SNX1-206ENST00000559389 OCLNQ16625 522 aa18.76■□□□□ 0.59
SNX1-206ENST00000559389 ZNF672Q499Z4 452 aaPredicted RBP18.76■□□□□ 0.59
SNX1-206ENST00000559389 ELFN2Q5R3F8 820 aa18.76■□□□□ 0.59
SNX1-206ENST00000559389 ZNF691Q5VV52 312 aa18.76■□□□□ 0.59
SNX1-206ENST00000559389 PAQR4Q8N4S7 273 aaPredicted RBP18.76■□□□□ 0.59
SNX1-206ENST00000559389 OR10S1Q8NGN2 331 aa18.76■□□□□ 0.59
SNX1-206ENST00000559389 OR1J2Q8NGS2 313 aa18.76■□□□□ 0.59
SNX1-206ENST00000559389 OR1F12Q8NHA8 337 aa18.76■□□□□ 0.59
SNX1-206ENST00000559389 ST7LQ8TDW4 575 aa18.76■□□□□ 0.59
SNX1-206ENST00000559389 AKAP1Q92667 903 aaKnown RBP eCLIP18.76■□□□□ 0.59
SNX1-206ENST00000559389 COQ7Q99807 217 aa18.76■□□□□ 0.59
SNX1-206ENST00000559389 CDH20Q9HBT6 801 aa18.76■□□□□ 0.59
SNX1-206ENST00000559389 HAO2Q9NYQ3 351 aa18.76■□□□□ 0.59
SNX1-206ENST00000559389 WARS2Q9UGM6 360 aaKnown RBP18.76■□□□□ 0.59
SNX1-206ENST00000559389 POU2F3Q9UKI9 436 aa18.76■□□□□ 0.59
SNX1-206ENST00000559389 HS3ST1O14792 307 aa18.75■□□□□ 0.59
SNX1-206ENST00000559389 CLIC3O95833 236 aa18.75■□□□□ 0.59
SNX1-206ENST00000559389 GDI2P50395 445 aaKnown RBP18.75■□□□□ 0.59
SNX1-206ENST00000559389 IL18R1Q13478 541 aa18.75■□□□□ 0.59
SNX1-206ENST00000559389 MEDAGQ5VYS4 303 aa18.75■□□□□ 0.59
SNX1-206ENST00000559389 SHFQ7M4L6 423 aa18.75■□□□□ 0.59
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