RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 SGCEO43556 437 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 CRLF1O75462 422 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 IGHV3-13P01766 116 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 HPXP02790 462 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 LYNX1P0DP58 116 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 COX5BP10606 129 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 HIST1H1CP16403 213 aaKnown RBP9.36□□□□□ -0.91
SPG11-216ENST00000559347 ZNF23P17027 643 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 MPV17P39210 176 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 HTR5AP47898 357 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 LSM6P62312 80 aaKnown RBP9.36□□□□□ -0.91
SPG11-216ENST00000559347 GLO1Q04760 184 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 RIN1Q13671 783 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 OTPQ5XKR4 325 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 ZNF770Q6IQ21 691 aaPredicted RBP9.36□□□□□ -0.91
SPG11-216ENST00000559347 DNM1P34Q6PK57 102 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 VASH1Q7L8A9 365 aaPredicted RBP9.36□□□□□ -0.91
SPG11-216ENST00000559347 TRPM8Q7Z2W7 1104 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 JAZF1Q86VZ6 243 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 LINC00471Q8N535 108 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 ZNF540Q8NDQ6 660 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 ABHD4Q8TB40 342 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 SLC25A40Q8TBP6 338 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 BCAS4Q8TDM0 211 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 GNPDA2Q8TDQ7 276 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 SNX33Q8WV41 574 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 GTF3AQ92664 365 aaKnown RBP9.36□□□□□ -0.91
SPG11-216ENST00000559347 MARS2Q96GW9 593 aaKnown RBP9.36□□□□□ -0.91
SPG11-216ENST00000559347 SNX18Q96RF0 628 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 NMNAT3Q96T66 252 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 IFT27Q9BW83 186 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 TRIM15Q9C019 465 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 RACGAP1Q9H0H5 632 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 RERGLQ9H628 205 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 EGLN3Q9H6Z9 239 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 YAE1D1Q9NRH1 226 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 VNN3Q9NY84 501 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 SLCO1C1Q9NYB5 712 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 ASH2LQ9UBL3 628 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 CDH10Q9Y6N8 788 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 DNHD1Q96M86 4753 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 OR6C6A6NF89 314 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 C17orf100A8MU93 164 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 A8MV72 311 aaPredicted RBP9.35□□□□□ -0.91
SPG11-216ENST00000559347 H3BSA7 217 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 BHLHE40O14503 412 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 ACOT8O14734 319 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 UBOX5O94941 541 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 MPZL1O95297 269 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 GPANK1O95872 356 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 NGFP01138 241 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 TACSTD2P09758 323 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 ACHEP22303 614 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 CRABP1P29762 137 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 MAGEB1P43366 347 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 GZMKP49863 264 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 SELENOVP59797 346 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 PPP1CBP62140 327 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 DBPQ10586 325 aaPredicted RBP9.35□□□□□ -0.91
SPG11-216ENST00000559347 PPP1R8Q12972 351 aaKnown RBP9.35□□□□□ -0.91
SPG11-216ENST00000559347 KCNMB1Q16558 191 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 MEP1BQ16820 701 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 FAM98BQ52LJ0 330 aaKnown RBP9.35□□□□□ -0.91
SPG11-216ENST00000559347 MBNL2Q5VZF2 373 aaKnown RBP9.35□□□□□ -0.91
SPG11-216ENST00000559347 RPL13AP3Q6NVV1 102 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 PGM2L1Q6PCE3 622 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 UNQ6126/PRO20091Q6UXV3 157 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 PRIMA1Q86XR5 153 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 C1orf174Q8IYL3 243 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 SDR9C7Q8NEX9 313 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 OR52L1Q8NGH7 329 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 OR8D4Q8NGM9 314 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 POP5Q969H6 163 aaKnown RBP9.35□□□□□ -0.91
SPG11-216ENST00000559347 C4orf45Q96LM5 186 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 PLA2G12AQ9BZM1 189 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 OR2J1Q9GZK6 312 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 FN3KQ9H479 309 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 CHODLQ9H9P2 273 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 HINT3Q9NQE9 182 aaKnown RBP9.35□□□□□ -0.91
SPG11-216ENST00000559347 PLEK2Q9NYT0 353 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 EIF3KQ9UBQ5 218 aaKnown RBP9.35□□□□□ -0.91
SPG11-216ENST00000559347 ATPIF1Q9UII2 106 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 GPR160Q9UJ42 338 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 POLR1DQ9Y2S0 133 aa9.35□□□□□ -0.91
SPG11-216ENST00000559347 FBN1P35555 2871 aaKnown RBP9.35□□□□□ -0.91
SPG11-216ENST00000559347 IDH3BO43837 385 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 LILRA1O75019 489 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 RP2O75695 350 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 CCNB2O95067 398 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 ABHD16AO95870 558 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 RENP00797 406 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 RAP2AP10114 183 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 NOS3P29474 1203 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 GCH1P30793 250 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 MMP15P51511 669 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 HIST1H3AP68431 136 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 MRPS11P82912 194 aaKnown RBP9.34□□□□□ -0.91
SPG11-216ENST00000559347 TRIP10Q15642 601 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 PCGF3Q3KNV8 242 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 ZNF718Q3SXZ3 478 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms