RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 NCOA6Q14686 2063 aaPredicted RBP15.82■□□□□ 0.12
CLPX-203ENST00000558958 RAD51DO75771 328 aa15.82■□□□□ 0.12
CLPX-203ENST00000558958 PTHP01270 115 aa15.82■□□□□ 0.12
CLPX-203ENST00000558958 CD79BP40259 229 aa15.82■□□□□ 0.12
CLPX-203ENST00000558958 TSC22D1Q15714 1073 aa15.82■□□□□ 0.12
CLPX-203ENST00000558958 TBRG1Q3YBR2 411 aa15.82■□□□□ 0.12
CLPX-203ENST00000558958 CDONQ4KMG0 1287 aa15.82■□□□□ 0.12
CLPX-203ENST00000558958 HIKESHIQ53FT3 197 aa15.82■□□□□ 0.12
CLPX-203ENST00000558958 ZNF684Q5T5D7 378 aa15.82■□□□□ 0.12
CLPX-203ENST00000558958 OR7E24Q6IFN5 339 aa15.82■□□□□ 0.12
CLPX-203ENST00000558958 STAC2Q6ZMT1 411 aa15.82■□□□□ 0.12
CLPX-203ENST00000558958 CFAP77Q6ZQR2 320 aa15.82■□□□□ 0.12
CLPX-203ENST00000558958 KCTD8Q6ZWB6 473 aa15.82■□□□□ 0.12
CLPX-203ENST00000558958 GJC3Q8NFK1 279 aa15.82■□□□□ 0.12
CLPX-203ENST00000558958 OR52N1Q8NH53 320 aa15.82■□□□□ 0.12
CLPX-203ENST00000558958 OR52N5Q8NH56 324 aa15.82■□□□□ 0.12
CLPX-203ENST00000558958 FGFBP3Q8TAT2 258 aa15.82■□□□□ 0.12
CLPX-203ENST00000558958 MND1Q9BWT6 205 aa15.82■□□□□ 0.12
CLPX-203ENST00000558958 TTTY10Q9BZA0 68 aa15.82■□□□□ 0.12
CLPX-203ENST00000558958 KCNN2Q9H2S1 579 aa15.82■□□□□ 0.12
CLPX-203ENST00000558958 C1orf198Q9H425 327 aa15.82■□□□□ 0.12
CLPX-203ENST00000558958 COQ3Q9NZJ6 369 aa15.82■□□□□ 0.12
CLPX-203ENST00000558958 ERRFI1Q9UJM3 462 aaPredicted RBP15.82■□□□□ 0.12
CLPX-203ENST00000558958 CAB39Q9Y376 341 aaPredicted RBP15.82■□□□□ 0.12
CLPX-203ENST00000558958 MYL12BO14950 172 aa15.81■□□□□ 0.12
CLPX-203ENST00000558958 RER1O15258 196 aa15.81■□□□□ 0.12
CLPX-203ENST00000558958 CLPTM1O96005 669 aa15.81■□□□□ 0.12
CLPX-203ENST00000558958 WNT11O96014 354 aa15.81■□□□□ 0.12
CLPX-203ENST00000558958 MMP7P09237 267 aaPredicted RBP15.81■□□□□ 0.12
CLPX-203ENST00000558958 PATE4P0C8F1 98 aa15.81■□□□□ 0.12
CLPX-203ENST00000558958 PCBD1P61457 104 aa15.81■□□□□ 0.12
CLPX-203ENST00000558958 ACTA2P62736 377 aa15.81■□□□□ 0.12
CLPX-203ENST00000558958 ACTG2P63267 376 aa15.81■□□□□ 0.12
CLPX-203ENST00000558958 ROM1Q03395 351 aa15.81■□□□□ 0.12
CLPX-203ENST00000558958 EGR3Q06889 387 aa15.81■□□□□ 0.12
CLPX-203ENST00000558958 OR2G6Q5TZ20 316 aa15.81■□□□□ 0.12
CLPX-203ENST00000558958 XAF1Q6GPH4 301 aa15.81■□□□□ 0.12
CLPX-203ENST00000558958 TMPRSS11AQ6ZMR5 421 aa15.81■□□□□ 0.12
CLPX-203ENST00000558958 KLHL36Q8N4N3 616 aa15.81■□□□□ 0.12
CLPX-203ENST00000558958 ZNF485Q8NCK3 441 aa15.81■□□□□ 0.12
CLPX-203ENST00000558958 OR10S1Q8NGN2 331 aa15.81■□□□□ 0.12
CLPX-203ENST00000558958 SNX33Q8WV41 574 aa15.81■□□□□ 0.12
CLPX-203ENST00000558958 RNF133Q8WVZ7 376 aa15.81■□□□□ 0.12
CLPX-203ENST00000558958 ASB5Q8WWX0 329 aa15.81■□□□□ 0.12
CLPX-203ENST00000558958 MYCBPQ99417 103 aaPredicted RBP15.81■□□□□ 0.12
CLPX-203ENST00000558958 GALNT8Q9NY28 637 aa15.81■□□□□ 0.12
CLPX-203ENST00000558958 ELOVL5Q9NYP7 299 aa15.81■□□□□ 0.12
CLPX-203ENST00000558958 SCOCQ9UIL1 159 aa15.81■□□□□ 0.12
CLPX-203ENST00000558958 LSM2Q9Y333 95 aaKnown RBP15.81■□□□□ 0.12
CLPX-203ENST00000558958 TIMM10BQ9Y5J6 103 aa15.81■□□□□ 0.12
CLPX-203ENST00000558958 FAM208BQ5VWN6 2430 aa15.81■□□□□ 0.12
CLPX-203ENST00000558958 MAGEB4O15481 346 aaPredicted RBP15.8■□□□□ 0.12
CLPX-203ENST00000558958 HLA-HP01893 362 aa15.8■□□□□ 0.12
CLPX-203ENST00000558958 HOXB1P14653 301 aaPredicted RBP15.8■□□□□ 0.12
CLPX-203ENST00000558958 ZNF32P17041 273 aa15.8■□□□□ 0.12
CLPX-203ENST00000558958 PSMB1P20618 241 aaKnown RBP15.8■□□□□ 0.12
CLPX-203ENST00000558958 SCRN3Q0VDG4 424 aa15.8■□□□□ 0.12
CLPX-203ENST00000558958 SLC25A35Q3KQZ1 300 aa15.8■□□□□ 0.12
CLPX-203ENST00000558958 SLC36A2Q495M3 483 aa15.8■□□□□ 0.12
CLPX-203ENST00000558958 TMEM154Q6P9G4 183 aa15.8■□□□□ 0.12
CLPX-203ENST00000558958 KCTD18Q6PI47 426 aaPredicted RBP15.8■□□□□ 0.12
CLPX-203ENST00000558958 BHLHA15Q7RTS1 189 aaPredicted RBP15.8■□□□□ 0.12
CLPX-203ENST00000558958 DPPA2Q7Z7J5 298 aa15.8■□□□□ 0.12
CLPX-203ENST00000558958 EGFL6Q8IUX8 553 aa15.8■□□□□ 0.12
CLPX-203ENST00000558958 CCDC36Q8IYA8 594 aa15.8■□□□□ 0.12
CLPX-203ENST00000558958 SYS1Q8N2H4 156 aa15.8■□□□□ 0.12
CLPX-203ENST00000558958 SLAMF6Q96DU3 332 aa15.8■□□□□ 0.12
CLPX-203ENST00000558958 MRPL48Q96GC5 212 aaKnown RBP15.8■□□□□ 0.12
CLPX-203ENST00000558958 OR5M11Q96RB7 305 aa15.8■□□□□ 0.12
CLPX-203ENST00000558958 OR8B4Q96RC9 309 aa15.8■□□□□ 0.12
CLPX-203ENST00000558958 HDHD5Q9BXW7 423 aa15.8■□□□□ 0.12
CLPX-203ENST00000558958 ISG20L2Q9H9L3 353 aaKnown RBP15.8■□□□□ 0.12
CLPX-203ENST00000558958 PNRC2Q9NPJ4 139 aaKnown RBP15.8■□□□□ 0.12
CLPX-203ENST00000558958 SLCO1C1Q9NYB5 712 aa15.8■□□□□ 0.12
CLPX-203ENST00000558958 MRM2Q9UI43 246 aaKnown RBP15.8■□□□□ 0.12
CLPX-203ENST00000558958 CACNA1CQ13936 2221 aa15.8■□□□□ 0.12
CLPX-203ENST00000558958 ZNF462Q96JM2 2506 aa15.8■□□□□ 0.12
CLPX-203ENST00000558958 HIVEP3Q5T1R4 2406 aa15.8■□□□□ 0.12
CLPX-203ENST00000558958 ZNF503-AS2A6NEH8 195 aa15.79■□□□□ 0.12
CLPX-203ENST00000558958 PSMD9O00233 223 aa15.79■□□□□ 0.12
CLPX-203ENST00000558958 SULT1C4O75897 302 aa15.79■□□□□ 0.12
CLPX-203ENST00000558958 LCKP06239 509 aa15.79■□□□□ 0.12
CLPX-203ENST00000558958 WNT4P56705 351 aa15.79■□□□□ 0.12
CLPX-203ENST00000558958 OR12D2P58182 307 aa15.79■□□□□ 0.12
CLPX-203ENST00000558958 FAM27E3Q08E93 113 aa15.79■□□□□ 0.12
CLPX-203ENST00000558958 NEDD8Q15843 81 aa15.79■□□□□ 0.12
CLPX-203ENST00000558958 TP53I3Q53FA7 332 aa15.79■□□□□ 0.12
CLPX-203ENST00000558958 CCDC92Q53HC0 331 aaPredicted RBP15.79■□□□□ 0.12
CLPX-203ENST00000558958 UBE2UQ5VVX9 321 aa15.79■□□□□ 0.12
CLPX-203ENST00000558958 PLEKHG7Q6ZR37 379 aa15.79■□□□□ 0.12
CLPX-203ENST00000558958 RHOUQ7L0Q8 258 aa15.79■□□□□ 0.12
CLPX-203ENST00000558958 KCTD20Q7Z5Y7 419 aa15.79■□□□□ 0.12
CLPX-203ENST00000558958 ZNF679Q8IYX0 411 aa15.79■□□□□ 0.12
CLPX-203ENST00000558958 C17orf78Q8N4C9 275 aa15.79■□□□□ 0.12
CLPX-203ENST00000558958 LILRB4Q8NHJ6 448 aa15.79■□□□□ 0.12
CLPX-203ENST00000558958 SPRYD4Q8WW59 207 aaPredicted RBP15.79■□□□□ 0.12
CLPX-203ENST00000558958 C4orf36Q96KX1 117 aa15.79■□□□□ 0.12
CLPX-203ENST00000558958 OR2H1Q9GZK4 316 aa15.79■□□□□ 0.12
CLPX-203ENST00000558958 SLC17A5Q9NRA2 495 aa15.79■□□□□ 0.12
CLPX-203ENST00000558958 B3GNT2Q9NY97 397 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms