RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 CCNB2O95067 398 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 PTHP01270 115 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 HLA-DQA2P01906 255 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 HPXP02790 462 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 CST2P09228 141 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 ZNF16P17020 682 aaPredicted RBP10.3□□□□□ -0.76
TPM1-216ENST00000558910 SLC6A6P31641 620 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 IFNGR2P38484 337 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 MPV17P39210 176 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 WNT5AP41221 380 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 MAGEB1P43366 347 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 HTR5AP47898 357 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 PPOXP50336 477 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 ZNF133P52736 654 aaPredicted RBP10.3□□□□□ -0.76
TPM1-216ENST00000558910 UCP2P55851 309 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 DSCR9P59020 149 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 SELENOVP59797 346 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 KRTAP1-1Q07627 177 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 HNRNPA0Q13151 305 aaKnown RBP10.3□□□□□ -0.76
TPM1-216ENST00000558910 CCNIQ14094 377 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 TRIM25Q14258 630 aaKnown RBP10.3□□□□□ -0.76
TPM1-216ENST00000558910 FXNQ16595 210 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 TSTQ16762 297 aaKnown RBP10.3□□□□□ -0.76
TPM1-216ENST00000558910 RFX4Q33E94 735 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 ANKDD1AQ495B1 522 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 PGBD2Q6P3X8 592 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 CORO6Q6QEF8 472 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 DPY19L2P2Q6ZN68 376 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 DNM1P46Q6ZS02 220 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 ZNF101Q8IZC7 436 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 SYNPRQ8TBG9 265 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 DHRS1Q96LJ7 313 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 FUZQ9BT04 418 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 BPESC1Q9GZL8 116 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 CHODLQ9H9P2 273 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 SMURF2Q9HAU4 748 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 NRIP3Q9NQ35 241 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 RPRD1BQ9NQG5 326 aaKnown RBP10.3□□□□□ -0.76
TPM1-216ENST00000558910 TAS2R1Q9NYW7 299 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 GRIP1Q9Y3R0 1128 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 SAMHD1Q9Y3Z3 626 aaKnown RBP10.3□□□□□ -0.76
TPM1-216ENST00000558910 TIMM10BQ9Y5J6 103 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 JMJD1CQ15652 2540 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 ABCA1O95477 2261 aa10.3□□□□□ -0.76
TPM1-216ENST00000558910 CR1P17927 2039 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 IGHV4-61A0A0C4DH41 118 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 C12orf71A8MTZ7 269 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 GYG2O15488 501 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 SPRY3O43610 288 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 SOX14O95416 240 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 RENP00797 406 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 NGFP01138 241 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 GASTP01350 101 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 APEHP13798 732 aaKnown RBP10.29□□□□□ -0.76
TPM1-216ENST00000558910 SLC25A16P16260 332 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 HIST1H1CP16403 213 aaKnown RBP10.29□□□□□ -0.76
TPM1-216ENST00000558910 USF1P22415 310 aaPredicted RBP10.29□□□□□ -0.76
TPM1-216ENST00000558910 COL8A2P25067 703 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 GCH1P30793 250 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 RBMXP38159 391 aaKnown RBP10.29□□□□□ -0.76
TPM1-216ENST00000558910 RAD52P43351 418 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 KLF3P57682 345 aaPredicted RBP10.29□□□□□ -0.76
TPM1-216ENST00000558910 PCBD1P61457 104 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 CCL8P80075 99 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 TRIP10Q15642 601 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 TMEM249Q2WGJ8 235 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 FAM98BQ52LJ0 330 aaKnown RBP10.29□□□□□ -0.76
TPM1-216ENST00000558910 FAM27BQ5VT28 67 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 GPR139Q6DWJ6 353 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 IL17RELQ6ZVW7 336 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 RFPL4BQ6ZWI9 263 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 DPPA2Q7Z7J5 298 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 SPATA24Q86W54 205 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 LINC00346Q8IVM7 164 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 CYB561A3Q8NBI2 242 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 AQP11Q8NBQ7 271 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 OR52E2Q8NGJ4 325 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 OR51L1Q8NGJ5 315 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 SLC25A40Q8TBP6 338 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 UBASH3BQ8TF42 649 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 SNX33Q8WV41 574 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 OTULINQ96BN8 352 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 POM121L2Q96KW2 1035 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 SNX18Q96RF0 628 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 BTBD10Q9BSF8 475 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 OR2J1Q9GZK6 312 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 C1orf198Q9H425 327 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 POFUT1Q9H488 388 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 TPSG1Q9NRR2 321 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 TBC1D23Q9NUY8 699 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 PLEK2Q9NYT0 353 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 ASH2LQ9UBL3 628 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 LYVE1Q9Y5Y7 322 aa10.29□□□□□ -0.76
TPM1-216ENST00000558910 DCTN6O00399 190 aa10.28□□□□□ -0.76
TPM1-216ENST00000558910 GNGT2O14610 69 aa10.28□□□□□ -0.76
TPM1-216ENST00000558910 RER1O15258 196 aa10.28□□□□□ -0.76
TPM1-216ENST00000558910 NCR1O76036 304 aa10.28□□□□□ -0.76
TPM1-216ENST00000558910 DBHP09172 617 aa10.28□□□□□ -0.76
TPM1-216ENST00000558910 CSF3P09919 207 aa10.28□□□□□ -0.76
TPM1-216ENST00000558910 FPR3P25089 353 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms