RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 TOX4O94842 621 aa8.14□□□□□ -1.11
SPG11-212ENST00000558790 OR6A2O95222 327 aa8.14□□□□□ -1.11
SPG11-212ENST00000558790 IGHV3-13P01766 116 aa8.14□□□□□ -1.11
SPG11-212ENST00000558790 MT-ND5P03915 603 aa8.14□□□□□ -1.11
SPG11-212ENST00000558790 MMP7P09237 267 aaPredicted RBP8.14□□□□□ -1.11
SPG11-212ENST00000558790 QDPRP09417 244 aa8.14□□□□□ -1.11
SPG11-212ENST00000558790 ZFP36P26651 326 aaKnown RBP8.14□□□□□ -1.11
SPG11-212ENST00000558790 MPV17P39210 176 aa8.14□□□□□ -1.11
SPG11-212ENST00000558790 WNT5AP41221 380 aa8.14□□□□□ -1.11
SPG11-212ENST00000558790 MMP15P51511 669 aa8.14□□□□□ -1.11
SPG11-212ENST00000558790 NFYCQ13952 458 aa8.14□□□□□ -1.11
SPG11-212ENST00000558790 SCARB2Q14108 478 aa8.14□□□□□ -1.11
SPG11-212ENST00000558790 ZNF74Q16587 644 aa8.14□□□□□ -1.11
SPG11-212ENST00000558790 SLC36A2Q495M3 483 aa8.14□□□□□ -1.11
SPG11-212ENST00000558790 SPRNQ5BIV9 151 aa8.14□□□□□ -1.11
SPG11-212ENST00000558790 TNFAIP8L3Q5GJ75 292 aa8.14□□□□□ -1.11
SPG11-212ENST00000558790 KLF17Q5JT82 389 aaPredicted RBP8.14□□□□□ -1.11
SPG11-212ENST00000558790 RBMS3Q6XE24 437 aaKnown RBP8.14□□□□□ -1.11
SPG11-212ENST00000558790 RFPL4BQ6ZWI9 263 aa8.14□□□□□ -1.11
SPG11-212ENST00000558790 LRRC18Q8N456 261 aa8.14□□□□□ -1.11
SPG11-212ENST00000558790 MREGQ8N565 214 aa8.14□□□□□ -1.11
SPG11-212ENST00000558790 LRRC17Q8N6Y2 441 aa8.14□□□□□ -1.11
SPG11-212ENST00000558790 NOXO1Q8NFA2 376 aa8.14□□□□□ -1.11
SPG11-212ENST00000558790 OR1J1Q8NGS3 322 aa8.14□□□□□ -1.11
SPG11-212ENST00000558790 GEMIN6Q8WXD5 167 aaKnown RBP8.14□□□□□ -1.11
SPG11-212ENST00000558790 POP5Q969H6 163 aaKnown RBP8.14□□□□□ -1.11
SPG11-212ENST00000558790 TRIM44Q96DX7 344 aaPredicted RBP8.14□□□□□ -1.11
SPG11-212ENST00000558790 NEIL1Q96FI4 390 aaPredicted RBP8.14□□□□□ -1.11
SPG11-212ENST00000558790 SLC25A44Q96H78 314 aaPredicted RBP8.14□□□□□ -1.11
SPG11-212ENST00000558790 ZNF48Q96MX3 618 aaPredicted RBP8.14□□□□□ -1.11
SPG11-212ENST00000558790 ZNF347Q96SE7 839 aa8.14□□□□□ -1.11
SPG11-212ENST00000558790 ZMAT3Q9HA38 289 aaKnown RBP8.14□□□□□ -1.11
SPG11-212ENST00000558790 MMP26Q9NRE1 261 aa8.14□□□□□ -1.11
SPG11-212ENST00000558790 THAP1Q9NVV9 213 aa8.14□□□□□ -1.11
SPG11-212ENST00000558790 DCAF16Q9NXF7 216 aa8.14□□□□□ -1.11
SPG11-212ENST00000558790 TAS2R5Q9NYW4 299 aa8.14□□□□□ -1.11
SPG11-212ENST00000558790 ZNF69Q9UC07 566 aa8.14□□□□□ -1.11
SPG11-212ENST00000558790 LEF1Q9UJU2 399 aaPredicted RBP8.14□□□□□ -1.11
SPG11-212ENST00000558790 PURGQ9UJV8 347 aaKnown RBP8.14□□□□□ -1.11
SPG11-212ENST00000558790 PPIAL4EA0A075B759 164 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 TRBV5-3A0A0A0MS03 114 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 PPIAL4CA0A0B4J2A2 164 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 IQCMA0A1B0GVH7 501 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 PRORSD1PA6NEY8 169 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 CPSF4LA6NMK7 179 aaKnown RBP8.13□□□□□ -1.11
SPG11-212ENST00000558790 PPIAL4DF5H284 164 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 RNF13O43567 381 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 LYPD3O95274 346 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 CH25HO95992 272 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 PTHP01270 115 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 IGHG1P01857 330 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 THY1P04216 161 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 PPIAL4FP0DN26 164 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 CCNOP22674 350 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 APLNRP35414 380 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 ATP4BP51164 291 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 CLRN1P58418 232 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 SEC61A1P61619 476 aaKnown RBP8.13□□□□□ -1.11
SPG11-212ENST00000558790 HSF2Q03933 536 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 NPTX1Q15818 432 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 HIST3H3Q16695 136 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 NRN1LQ496H8 165 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 PABPC1L2AQ5JQF8 200 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 LRIF1Q5T3J3 769 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 HHATQ5VTY9 493 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 ZNF613Q6PF04 617 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 DPPA2Q7Z7J5 298 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 ARMC8Q8IUR7 673 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 SMYD1Q8NB12 490 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 CPEB3Q8NE35 698 aaKnown RBP8.13□□□□□ -1.11
SPG11-212ENST00000558790 OR1J2Q8NGS2 313 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 ST7LQ8TDW4 575 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 MCHR2Q969V1 340 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 MCHR1Q99705 422 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 ARHGDIGQ99819 225 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 MEGF9Q9H1U4 602 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 LRMDAQ9H2I8 198 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 SLCO1B3Q9NPD5 702 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 NANSQ9NR45 359 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 VAPAQ9P0L0 249 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 SLC13A4Q9UKG4 626 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 NUP50Q9UKX7 468 aa8.13□□□□□ -1.11
SPG11-212ENST00000558790 DYNC2H1Q8NCM8 4307 aaKnown RBP8.13□□□□□ -1.11
SPG11-212ENST00000558790 PLSCR5A0PG75 271 aa8.12□□□□□ -1.11
SPG11-212ENST00000558790 TRAPPC2LH3BP13 241 aa8.12□□□□□ -1.11
SPG11-212ENST00000558790 MGRN1O60291 552 aa8.12□□□□□ -1.11
SPG11-212ENST00000558790 FMO6PO60774 539 aa8.12□□□□□ -1.11
SPG11-212ENST00000558790 FOXH1O75593 365 aa8.12□□□□□ -1.11
SPG11-212ENST00000558790 SLC2A10O95528 541 aa8.12□□□□□ -1.11
SPG11-212ENST00000558790 IGHV2-70P01814 119 aa8.12□□□□□ -1.11
SPG11-212ENST00000558790 IGHMP01871 453 aa8.12□□□□□ -1.11
SPG11-212ENST00000558790 OPN1SWP03999 348 aa8.12□□□□□ -1.11
SPG11-212ENST00000558790 ASAH2BP0C7U1 165 aa8.12□□□□□ -1.11
SPG11-212ENST00000558790 HOXA5P20719 270 aa8.12□□□□□ -1.11
SPG11-212ENST00000558790 SLC6A2P23975 617 aa8.12□□□□□ -1.11
SPG11-212ENST00000558790 STOMP27105 288 aa8.12□□□□□ -1.11
SPG11-212ENST00000558790 CDAP32320 146 aa8.12□□□□□ -1.11
SPG11-212ENST00000558790 ZNF84P51523 738 aa8.12□□□□□ -1.11
SPG11-212ENST00000558790 PLP2Q04941 152 aa8.12□□□□□ -1.11
SPG11-212ENST00000558790 ZNF154Q13106 437 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms