RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 GRINAQ7Z429 371 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 NOXA1Q86UR1 476 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 LRRC28Q86X40 367 aaPredicted RBP9.13□□□□□ -0.95
TPM1-212ENST00000558347 GTPBP8Q8N3Z3 284 aaPredicted RBP9.13□□□□□ -0.95
TPM1-212ENST00000558347 ZFP41Q8N8Y5 198 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 CNEP1R1Q8N9A8 125 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 ASCC1Q8N9N2 400 aaKnown RBP9.13□□□□□ -0.95
TPM1-212ENST00000558347 ELOA3Q8NG57 546 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 OR51G2Q8NGK0 314 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 FAM222BQ8WU58 562 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 KISS1RQ969F8 398 aaPredicted RBP9.13□□□□□ -0.95
TPM1-212ENST00000558347 ZNF524Q96C55 264 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 STARD4Q96DR4 205 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 RNF170Q96K19 258 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 ADGRG7Q96K78 797 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 MARVELD1Q9BSK0 173 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 HDHD5Q9BXW7 423 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 MMP28Q9H239 520 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 PIGMQ9H3S5 423 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 NIPAL2Q9H841 368 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 RNF122Q9H9V4 155 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 MEPEQ9NQ76 525 aaPredicted RBP9.13□□□□□ -0.95
TPM1-212ENST00000558347 CYSLTR2Q9NS75 346 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 MAP1AP78559 2803 aaPredicted RBP9.12□□□□□ -0.95
TPM1-212ENST00000558347 MPDZO75970 2070 aa9.12□□□□□ -0.95
TPM1-212ENST00000558347 IGKV1D-42A0A075B6H8 117 aa9.12□□□□□ -0.95
TPM1-212ENST00000558347 A0A087WZY1 265 aa9.12□□□□□ -0.95
TPM1-212ENST00000558347 DAPL1A0PJW8 107 aa9.12□□□□□ -0.95
TPM1-212ENST00000558347 A8MXE2 369 aa9.12□□□□□ -0.95
TPM1-212ENST00000558347 EIF1AYO14602 144 aaKnown RBP9.12□□□□□ -0.95
TPM1-212ENST00000558347 LYRM1O43325 122 aa9.12□□□□□ -0.95
TPM1-212ENST00000558347 ORC5O43913 435 aa9.12□□□□□ -0.95
TPM1-212ENST00000558347 PTP4A3O75365 173 aa9.12□□□□□ -0.95
TPM1-212ENST00000558347 AQP8O94778 261 aa9.12□□□□□ -0.95
TPM1-212ENST00000558347 NTN1O95631 604 aa9.12□□□□□ -0.95
TPM1-212ENST00000558347 IFNGP01579 166 aa9.12□□□□□ -0.95
TPM1-212ENST00000558347 CD1AP06126 327 aa9.12□□□□□ -0.95
TPM1-212ENST00000558347 CRHP06850 196 aa9.12□□□□□ -0.95
TPM1-212ENST00000558347 CD8BP10966 210 aa9.12□□□□□ -0.95
TPM1-212ENST00000558347 EPXP11678 715 aa9.12□□□□□ -0.95
TPM1-212ENST00000558347 PRKCAP17252 672 aa9.12□□□□□ -0.95
TPM1-212ENST00000558347 MAKP20794 623 aa9.12□□□□□ -0.95
TPM1-212ENST00000558347 IL11P20809 199 aa9.12□□□□□ -0.95
TPM1-212ENST00000558347 SLC2A5P22732 501 aa9.12□□□□□ -0.95
TPM1-212ENST00000558347 TACR3P29371 465 aa9.12□□□□□ -0.95
TPM1-212ENST00000558347 INPP1P49441 399 aa9.12□□□□□ -0.95
TPM1-212ENST00000558347 ZNF41P51814 821 aaPredicted RBP9.12□□□□□ -0.95
TPM1-212ENST00000558347 POLR2HP52434 150 aaKnown RBP9.12□□□□□ -0.95
TPM1-212ENST00000558347 MAP2K6P52564 334 aa9.12□□□□□ -0.95
TPM1-212ENST00000558347 FXYD6P3P58550 94 aa9.12□□□□□ -0.95
TPM1-212ENST00000558347 SIRPAP78324 504 aa9.12□□□□□ -0.95
TPM1-212ENST00000558347 DAZAP2Q15038 168 aaPredicted RBP9.12□□□□□ -0.95
TPM1-212ENST00000558347 OR2A2Q6IF42 318 aa9.12□□□□□ -0.95
TPM1-212ENST00000558347 ZBTB8AQ96BR9 441 aa9.12□□□□□ -0.95
TPM1-212ENST00000558347 BPIFA2Q96DR5 249 aa9.12□□□□□ -0.95
TPM1-212ENST00000558347 OPN3Q9H1Y3 402 aaPredicted RBP9.12□□□□□ -0.95
TPM1-212ENST00000558347 CLEC4MQ9H2X3 399 aaPredicted RBP9.12□□□□□ -0.95
TPM1-212ENST00000558347 RERGLQ9H628 205 aa9.12□□□□□ -0.95
TPM1-212ENST00000558347 TMEM185BQ9H7F4 350 aa9.12□□□□□ -0.95
TPM1-212ENST00000558347 RABL2AQ9UBK7 228 aaPredicted RBP9.12□□□□□ -0.95
TPM1-212ENST00000558347 RABL2BQ9UNT1 228 aa9.12□□□□□ -0.95
TPM1-212ENST00000558347 SIGLEC7Q9Y286 467 aa9.12□□□□□ -0.95
TPM1-212ENST00000558347 RBMX2Q9Y388 322 aaKnown RBP9.12□□□□□ -0.95
TPM1-212ENST00000558347 ZNF175Q9Y473 711 aa9.12□□□□□ -0.95
TPM1-212ENST00000558347 NOX1Q9Y5S8 564 aa9.12□□□□□ -0.95
TPM1-212ENST00000558347 SHISA3A0PJX4 238 aa9.11□□□□□ -0.95
TPM1-212ENST00000558347 EFNA2O43921 213 aa9.11□□□□□ -0.95
TPM1-212ENST00000558347 TMEM127O75204 238 aa9.11□□□□□ -0.95
TPM1-212ENST00000558347 SERPINA3P01011 423 aa9.11□□□□□ -0.95
TPM1-212ENST00000558347 CGAP01215 116 aa9.11□□□□□ -0.95
TPM1-212ENST00000558347 ZNF3P17036 446 aa9.11□□□□□ -0.95
TPM1-212ENST00000558347 CXCR1P25024 350 aa9.11□□□□□ -0.95
TPM1-212ENST00000558347 ERP29P30040 261 aaKnown RBP9.11□□□□□ -0.95
TPM1-212ENST00000558347 SLC6A6P31641 620 aa9.11□□□□□ -0.95
TPM1-212ENST00000558347 TALDO1P37837 337 aa9.11□□□□□ -0.95
TPM1-212ENST00000558347 APOBEC1P41238 236 aaKnown RBP9.11□□□□□ -0.95
TPM1-212ENST00000558347 EIF1AXP47813 144 aaKnown RBP9.11□□□□□ -0.95
TPM1-212ENST00000558347 CAV3P56539 151 aa9.11□□□□□ -0.95
TPM1-212ENST00000558347 RAC1P63000 192 aa9.11□□□□□ -0.95
TPM1-212ENST00000558347 FAM27E3Q08E93 113 aa9.11□□□□□ -0.95
TPM1-212ENST00000558347 FOXF1Q12946 379 aa9.11□□□□□ -0.95
TPM1-212ENST00000558347 GUSBP1Q15486 140 aa9.11□□□□□ -0.95
TPM1-212ENST00000558347 SGCBQ16585 318 aa9.11□□□□□ -0.95
TPM1-212ENST00000558347 ZNF362Q5T0B9 420 aaPredicted RBP9.11□□□□□ -0.95
TPM1-212ENST00000558347 EEF1A1P5Q5VTE0 462 aa9.11□□□□□ -0.95
TPM1-212ENST00000558347 ZNF474Q6S9Z5 364 aaPredicted RBP9.11□□□□□ -0.95
TPM1-212ENST00000558347 C5orf46Q6UWT4 87 aa9.11□□□□□ -0.95
TPM1-212ENST00000558347 BAIAP2L2Q6UXY1 529 aa9.11□□□□□ -0.95
TPM1-212ENST00000558347 PXKQ7Z7A4 578 aa9.11□□□□□ -0.95
TPM1-212ENST00000558347 CDC20BQ86Y33 519 aa9.11□□□□□ -0.95
TPM1-212ENST00000558347 ADGRG3Q86Y34 549 aa9.11□□□□□ -0.95
TPM1-212ENST00000558347 MS4A15Q8N5U1 240 aa9.11□□□□□ -0.95
TPM1-212ENST00000558347 TMEM99Q8N816 258 aa9.11□□□□□ -0.95
TPM1-212ENST00000558347 SLC37A3Q8NCC5 494 aa9.11□□□□□ -0.95
TPM1-212ENST00000558347 OR10D3Q8NH80 312 aa9.11□□□□□ -0.95
TPM1-212ENST00000558347 PFN4Q8NHR9 129 aa9.11□□□□□ -0.95
TPM1-212ENST00000558347 GRPEL2Q8TAA5 225 aa9.11□□□□□ -0.95
TPM1-212ENST00000558347 LIPHQ8WWY8 451 aa9.11□□□□□ -0.95
TPM1-212ENST00000558347 CREB3L1Q96BA8 519 aa9.11□□□□□ -0.95
TPM1-212ENST00000558347 MRGPRX4Q96LA9 322 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms