RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 PTPRJQ12913 1337 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 OR3A1P47881 315 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 FKBP1AP62942 108 aaKnown RBP3.38□□□□□ -1.87
ATXN3-248ENST00000558190 LINC00303Q3SY05 128 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 WBP2NLQ6ICG8 309 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 LINC00469Q8N7U9 141 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 PISDQ9UG56 409 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 SPATA31A3Q5VYP0 1347 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 DDNO94850 711 aaPredicted RBP3.38□□□□□ -1.87
ATXN3-248ENST00000558190 CD200P41217 278 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 WDR74Q6RFH5 385 aaPredicted RBP3.38□□□□□ -1.87
ATXN3-248ENST00000558190 FAM160A2Q8N612 972 aaPredicted RBP3.38□□□□□ -1.87
ATXN3-248ENST00000558190 DTWD2Q8NBA8 298 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 OR8B4Q96RC9 309 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 ETV7Q9Y603 341 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 ZNF860A6NHJ4 632 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 UPK1AO00322 258 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 GPR37O15354 613 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 LEFTY1O75610 366 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 ZNF17P17021 662 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 ELAVL1Q15717 326 aaKnown RBP3.37□□□□□ -1.87
ATXN3-248ENST00000558190 OTPQ5XKR4 325 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 PLPP6Q8IY26 295 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 ROBO4Q8WZ75 1007 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 ATOH1Q92858 354 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-248ENST00000558190 PRRX2Q99811 253 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 ADAT1Q9BUB4 502 aaKnown RBP3.37□□□□□ -1.87
ATXN3-248ENST00000558190 GLIPR2Q9H4G4 154 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 COA3Q9Y2R0 106 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-248ENST00000558190 G3V3Q6 166 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 BCL2L11O43521 198 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 DLK1P80370 383 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 ST6GALNAC3Q8NDV1 305 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 INSM2Q96T92 566 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-248ENST00000558190 WDR13Q9H1Z4 485 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 OR1A2Q9Y585 309 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 TGIF2-C20orf24A0A0A6YYL0 155 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 TMEM31Q5JXX7 168 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 TAS1R1Q7RTX1 841 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 NRSN1Q8IZ57 195 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 SUMF1Q8NBK3 374 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 OR4A16Q8NH70 328 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 FOXJ1Q92949 421 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 ADOQ96SZ5 270 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 TMEM9BQ9NQ34 198 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 BICRAQ9NZM4 1560 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 RPLP1P05386 114 aaKnown RBP3.37□□□□□ -1.87
ATXN3-248ENST00000558190 PLP1P60201 277 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 AGERQ15109 404 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 XKR7Q5GH72 579 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 RTN4RL1Q86UN2 441 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-248ENST00000558190 RAB7BQ96AH8 199 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 CNOT1A5YKK6 2376 aaKnown RBP3.37□□□□□ -1.87
ATXN3-248ENST00000558190 OR5H8P0DN80 308 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 SLC2A1P11166 492 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 PHF19Q5T6S3 580 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 A0A1B0GWA3 101 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 TCRBV21S2A2A0A5A6 115 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 C1QTNF3-AMACRE9PGA6 284 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 C1orf105O95561 183 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 SULT1A3P0DMM9 295 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 SULT1A4P0DMN0 295 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 SLC25A6P12236 298 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 PIPP12273 146 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-248ENST00000558190 ZNF30P17039 623 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 UBE2G2P60604 165 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 C1orf87Q8N0U7 546 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 OR13D1Q8NGV5 346 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 LMX1AQ8TE12 382 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 GINS3Q9BRX5 216 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 TPPP3Q9BW30 176 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 LDAHQ9H6V9 325 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 RASL12Q9NYN1 266 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 USP31Q70CQ4 1352 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 MFGE8Q08431 387 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-248ENST00000558190 MPV17LQ2QL34 196 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 TMEM184AQ6ZMB5 413 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 OR52D1Q9H346 318 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 PSENENQ9NZ42 101 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 PRKNO60260 465 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-248ENST00000558190 SPANXN5Q5MJ07 72 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 PTOV1Q86YD1 416 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 TMEM38AQ9H6F2 299 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 EMC9Q9Y3B6 208 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 IFITM10A6NMD0 228 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 SMIM13P0DJ93 91 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 CPMP14384 443 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 HBG1P69891 147 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 HBG2P69892 147 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 OR8G1Q15617 311 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 CIB3Q96Q77 187 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-248ENST00000558190 TAAR9Q96RI9 348 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 HSPB9Q9BQS6 159 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 ZDHHC4Q9NPG8 344 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 CBLCQ9ULV8 474 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 A0A1B0GTL3 188 aa3.37□□□□□ -1.87
ATXN3-248ENST00000558190 EIF1BO60739 113 aaKnown RBP3.37□□□□□ -1.87
ATXN3-248ENST00000558190 SNAI1O95863 264 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-248ENST00000558190 EIF1P41567 113 aaKnown RBP3.37□□□□□ -1.87
ATXN3-248ENST00000558190 ELLP55199 621 aaPredicted RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms