RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 HRNRQ86YZ3 2850 aaPredicted RBP13.28□□□□□ -0.28
NEDD1-213ENST00000557644 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.28□□□□□ -0.28
NEDD1-213ENST00000557644 DPRXA6NFQ7 191 aa13.28□□□□□ -0.28
NEDD1-213ENST00000557644 DEFB108AA8MXU0 73 aa13.28□□□□□ -0.28
NEDD1-213ENST00000557644 IGLV1-44P01699 117 aa13.28□□□□□ -0.28
NEDD1-213ENST00000557644 CECR9P0C854 216 aa13.28□□□□□ -0.28
NEDD1-213ENST00000557644 CCL2P13500 99 aa13.28□□□□□ -0.28
NEDD1-213ENST00000557644 COX6B1P14854 86 aa13.28□□□□□ -0.28
NEDD1-213ENST00000557644 ZNF14P17017 642 aaPredicted RBP13.28□□□□□ -0.28
NEDD1-213ENST00000557644 ARR3P36575 388 aa13.28□□□□□ -0.28
NEDD1-213ENST00000557644 PCBD1P61457 104 aa13.28□□□□□ -0.28
NEDD1-213ENST00000557644 MEDAGQ5VYS4 303 aa13.28□□□□□ -0.28
NEDD1-213ENST00000557644 LAIR2Q6ISS4 152 aa13.28□□□□□ -0.28
NEDD1-213ENST00000557644 TMEM53Q6P2H8 277 aa13.28□□□□□ -0.28
NEDD1-213ENST00000557644 OR51G2Q8NGK0 314 aa13.28□□□□□ -0.28
NEDD1-213ENST00000557644 PLPPR2Q96GM1 343 aa13.28□□□□□ -0.28
NEDD1-213ENST00000557644 MAP6Q96JE9 813 aa13.28□□□□□ -0.28
NEDD1-213ENST00000557644 ADGRL4Q9HBW9 690 aa13.28□□□□□ -0.28
NEDD1-213ENST00000557644 CRNNQ9UBG3 495 aaPredicted RBP13.28□□□□□ -0.28
NEDD1-213ENST00000557644 GDF2Q9UK05 429 aaPredicted RBP13.28□□□□□ -0.28
NEDD1-213ENST00000557644 APEX1P27695 318 aaKnown RBP13.28□□□□□ -0.28
NEDD1-213ENST00000557644 HSPA13P48723 471 aa13.28□□□□□ -0.28
NEDD1-213ENST00000557644 BSPH1Q075Z2 132 aa13.28□□□□□ -0.28
NEDD1-213ENST00000557644 SPOCK1Q08629 439 aa13.28□□□□□ -0.28
NEDD1-213ENST00000557644 GGTLC2Q14390 218 aa13.28□□□□□ -0.28
NEDD1-213ENST00000557644 PCK2Q16822 640 aa13.28□□□□□ -0.28
NEDD1-213ENST00000557644 CCDC92Q53HC0 331 aaPredicted RBP13.28□□□□□ -0.28
NEDD1-213ENST00000557644 LCN1P1Q5VSP4 162 aa13.28□□□□□ -0.28
NEDD1-213ENST00000557644 DCXRQ7Z4W1 244 aa13.28□□□□□ -0.28
NEDD1-213ENST00000557644 SYT9Q86SS6 491 aa13.28□□□□□ -0.28
NEDD1-213ENST00000557644 RFKQ969G6 155 aa13.28□□□□□ -0.28
NEDD1-213ENST00000557644 HS3ST6Q96QI5 342 aa13.28□□□□□ -0.28
NEDD1-213ENST00000557644 RASSF4Q9H2L5 321 aa13.28□□□□□ -0.28
NEDD1-213ENST00000557644 WARS2Q9UGM6 360 aaKnown RBP13.28□□□□□ -0.28
NEDD1-213ENST00000557644 ROS1P08922 2347 aa13.27□□□□□ -0.28
NEDD1-213ENST00000557644 SGCEO43556 437 aa13.27□□□□□ -0.29
NEDD1-213ENST00000557644 SCRN3Q0VDG4 424 aa13.27□□□□□ -0.29
NEDD1-213ENST00000557644 CDK5R2Q13319 367 aa13.27□□□□□ -0.29
NEDD1-213ENST00000557644 VASH1Q7L8A9 365 aaPredicted RBP13.27□□□□□ -0.29
NEDD1-213ENST00000557644 THAP5Q7Z6K1 395 aa13.27□□□□□ -0.29
NEDD1-213ENST00000557644 DPPA2Q7Z7J5 298 aa13.27□□□□□ -0.29
NEDD1-213ENST00000557644 OR2AJ1Q8NGZ0 328 aa13.27□□□□□ -0.29
NEDD1-213ENST00000557644 AMELYQ99218 206 aa13.27□□□□□ -0.29
NEDD1-213ENST00000557644 CNN2Q99439 309 aaKnown RBP13.27□□□□□ -0.29
NEDD1-213ENST00000557644 ANKRD60Q9BZ19 345 aa13.27□□□□□ -0.29
NEDD1-213ENST00000557644 HAO2Q9NYQ3 351 aa13.27□□□□□ -0.29
NEDD1-213ENST00000557644 PLEK2Q9NYT0 353 aa13.27□□□□□ -0.29
NEDD1-213ENST00000557644 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.27□□□□□ -0.29
NEDD1-213ENST00000557644 KLHDC2Q9Y2U9 406 aa13.27□□□□□ -0.29
NEDD1-213ENST00000557644 PCDHGB5Q9Y5G0 923 aa13.27□□□□□ -0.29
NEDD1-213ENST00000557644 BAHCC1Q9P281 2608 aa13.27□□□□□ -0.29
NEDD1-213ENST00000557644 DOK2O60496 412 aa13.27□□□□□ -0.29
NEDD1-213ENST00000557644 SERPINA5P05154 406 aa13.27□□□□□ -0.29
NEDD1-213ENST00000557644 CD40P25942 277 aa13.27□□□□□ -0.29
NEDD1-213ENST00000557644 MTNR1AP48039 350 aa13.27□□□□□ -0.29
NEDD1-213ENST00000557644 ZNF91Q05481 1191 aa13.27□□□□□ -0.29
NEDD1-213ENST00000557644 TEX30Q5JUR7 227 aa13.27□□□□□ -0.29
NEDD1-213ENST00000557644 SPATC1Q76KD6 591 aa13.27□□□□□ -0.29
NEDD1-213ENST00000557644 RFLNBQ8N5W9 214 aa13.27□□□□□ -0.29
NEDD1-213ENST00000557644 FAM169BQ8N8A8 192 aa13.27□□□□□ -0.29
NEDD1-213ENST00000557644 GJC3Q8NFK1 279 aa13.27□□□□□ -0.29
NEDD1-213ENST00000557644 OR4F15Q8NGB8 312 aa13.27□□□□□ -0.29
NEDD1-213ENST00000557644 OR10S1Q8NGN2 331 aa13.27□□□□□ -0.29
NEDD1-213ENST00000557644 FBLIM1Q8WUP2 373 aa13.27□□□□□ -0.29
NEDD1-213ENST00000557644 SLC7A6Q92536 515 aa13.27□□□□□ -0.29
NEDD1-213ENST00000557644 RNFT2Q96EX2 444 aa13.27□□□□□ -0.29
NEDD1-213ENST00000557644 PIK3IP1Q96FE7 263 aa13.27□□□□□ -0.29
NEDD1-213ENST00000557644 Q96MT0 163 aa13.27□□□□□ -0.29
NEDD1-213ENST00000557644 NGBQ9NPG2 151 aa13.27□□□□□ -0.29
NEDD1-213ENST00000557644 PNRC2Q9NPJ4 139 aaKnown RBP13.27□□□□□ -0.29
NEDD1-213ENST00000557644 KCNN3Q9UGI6 736 aa13.27□□□□□ -0.29
NEDD1-213ENST00000557644 HSPE1-MOB4S4R3N1 261 aa13.27□□□□□ -0.29
NEDD1-213ENST00000557644 LRBAP50851 2863 aa13.26□□□□□ -0.29
NEDD1-213ENST00000557644 SBK2P0C263 348 aa13.26□□□□□ -0.29
NEDD1-213ENST00000557644 DBTP11182 482 aaKnown RBP13.26□□□□□ -0.29
NEDD1-213ENST00000557644 LOXP28300 417 aaPredicted RBP13.26□□□□□ -0.29
NEDD1-213ENST00000557644 HIST1H3AP68431 136 aa13.26□□□□□ -0.29
NEDD1-213ENST00000557644 EIF2B1Q14232 305 aaKnown RBP13.26□□□□□ -0.29
NEDD1-213ENST00000557644 HIST2H3PS2Q5TEC6 136 aa13.26□□□□□ -0.29
NEDD1-213ENST00000557644 HIST2H3AQ71DI3 136 aa13.26□□□□□ -0.29
NEDD1-213ENST00000557644 SSX8Q7RTT4 187 aa13.26□□□□□ -0.29
NEDD1-213ENST00000557644 SLC16A9Q7RTY1 509 aa13.26□□□□□ -0.29
NEDD1-213ENST00000557644 PAQR4Q8N4S7 273 aaPredicted RBP13.26□□□□□ -0.29
NEDD1-213ENST00000557644 OTOSQ8NHW6 89 aa13.26□□□□□ -0.29
NEDD1-213ENST00000557644 ST7LQ8TDW4 575 aa13.26□□□□□ -0.29
NEDD1-213ENST00000557644 CNBD2Q96M20 576 aa13.26□□□□□ -0.29
NEDD1-213ENST00000557644 RHNO1Q9BSD3 238 aa13.26□□□□□ -0.29
NEDD1-213ENST00000557644 TTTY10Q9BZA0 68 aa13.26□□□□□ -0.29
NEDD1-213ENST00000557644 RAB26Q9ULW5 256 aa13.26□□□□□ -0.29
NEDD1-213ENST00000557644 COPS3Q9UNS2 423 aa13.26□□□□□ -0.29
NEDD1-213ENST00000557644 FBN2P35556 2912 aa13.26□□□□□ -0.29
NEDD1-213ENST00000557644 LOC100509620A0A075B734 347 aa13.25□□□□□ -0.29
NEDD1-213ENST00000557644 ABCD4O14678 606 aa13.25□□□□□ -0.29
NEDD1-213ENST00000557644 SYNGR3O43761 229 aa13.25□□□□□ -0.29
NEDD1-213ENST00000557644 TMCC2O75069 709 aa13.25□□□□□ -0.29
NEDD1-213ENST00000557644 MYF6P23409 242 aa13.25□□□□□ -0.29
NEDD1-213ENST00000557644 CALCRP30988 508 aa13.25□□□□□ -0.29
NEDD1-213ENST00000557644 PLP2Q04941 152 aa13.25□□□□□ -0.29
NEDD1-213ENST00000557644 BEX5Q5H9J7 111 aa13.25□□□□□ -0.29
NEDD1-213ENST00000557644 NCMAPQ5T1S8 102 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms