RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 MED12LQ86YW9 2145 aa12.73□□□□□ -0.37
ARHGEF40-208ENST00000557498 LOC100506127A0A0U1RQW1 187 aa12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 TRIM64BA6NI03 449 aa12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 ERVH48-1M5A8F1 160 aa12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 PRRG2O14669 202 aa12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 ZNF254O75437 659 aa12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 ATE1O95260 518 aa12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 CD1AP06126 327 aa12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 CST2P09228 141 aa12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 H2BFMP0C1H6 154 aa12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 OPRL1P41146 370 aa12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 CRYBB2P43320 205 aa12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 KIR2DL2P43627 348 aaPredicted RBP12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 GDI2P50395 445 aaKnown RBP12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 NCS1P62166 190 aa12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 LSM3P62310 102 aaKnown RBP12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 HIST1H3AP68431 136 aa12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 ARF1P84077 181 aaKnown RBP12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 SLC3A1Q07837 685 aa12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 FAPQ12884 760 aa12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 HIST2H3PS2Q5TEC6 136 aa12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 FBXW9Q5XUX1 488 aa12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 OR7E24Q6IFN5 339 aa12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 KLHL24Q6TFL4 600 aa12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 GDPGP1Q6ZNW5 385 aa12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 HIST2H3AQ71DI3 136 aa12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 LRRC18Q8N456 261 aa12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 SLC22A24Q8N4F4 322 aa12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 CNEP1R1Q8N9A8 125 aa12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 OR10S1Q8NGN2 331 aa12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 PGLYRP3Q96LB9 341 aa12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 PNRC2Q9NPJ4 139 aaKnown RBP12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 CENPMQ9NSP4 180 aa12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 SSR3Q9UNL2 185 aa12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 ZNF835Q9Y2P0 537 aa12.72□□□□□ -0.37
ARHGEF40-208ENST00000557498 CELSR3Q9NYQ7 3312 aa12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 TRBV2A0A0J9YWF9 115 aa12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 ZNF878C9JN71 531 aa12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 SLC22A1O15245 554 aa12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 RER1O15258 196 aa12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 FARS2O95363 451 aaKnown RBP12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 CRHP06850 196 aa12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 TMIGD3P0DMS9 266 aaPredicted RBP12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 EDN3P14138 238 aa12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 MPGP29372 298 aa12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 FOXG1P55316 489 aaPredicted RBP12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 SH3BGRP55822 239 aaPredicted RBP12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 PER3P56645 1201 aa12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 NANOS3P60323 173 aaKnown RBP12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 VBP1P61758 197 aa12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 RBPJQ06330 500 aa12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 ALKBH1Q13686 389 aaKnown RBP12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 SPCS2Q15005 226 aa12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 TRAM1Q15629 374 aa12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 EIF2S3LQ2VIR3 472 aaKnown RBP12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 SOWAHCQ53LP3 525 aaPredicted RBP12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 FDX2Q6P4F2 183 aa12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 CD200R1LQ6Q8B3 271 aa12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 ZNF813Q6ZN06 617 aa12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 ZNF627Q7L945 461 aa12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 GJC3Q8NFK1 279 aa12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 HSD17B8Q92506 261 aa12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 TMEM203Q969S6 136 aa12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 TRMT61AQ96FX7 289 aaKnown RBP12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 ZFP3Q96NJ6 502 aa12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 SH3GL3Q99963 347 aa12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 CENPOQ9BU64 300 aa12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 TMED9Q9BVK6 235 aa12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 TP63Q9H3D4 680 aaPredicted RBP12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 EXOSC4Q9NPD3 245 aaKnown RBP12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 R4GMQ9 66 aa12.71□□□□□ -0.37
ARHGEF40-208ENST00000557498 DOCK7Q96N67 2140 aa12.71□□□□□ -0.38
ARHGEF40-208ENST00000557498 ASPMQ8IZT6 3477 aa12.71□□□□□ -0.38
ARHGEF40-208ENST00000557498 TRDV1A0A1B0GX56 115 aa12.7□□□□□ -0.38
ARHGEF40-208ENST00000557498 TTLL8A6PVC2 850 aa12.7□□□□□ -0.38
ARHGEF40-208ENST00000557498 GPRIN2O60269 458 aa12.7□□□□□ -0.38
ARHGEF40-208ENST00000557498 SLC19A2O60779 497 aa12.7□□□□□ -0.38
ARHGEF40-208ENST00000557498 RGS9O75916 674 aaPredicted RBP12.7□□□□□ -0.38
ARHGEF40-208ENST00000557498 TOXO94900 526 aa12.7□□□□□ -0.38
ARHGEF40-208ENST00000557498 CNOT4O95628 575 aaKnown RBP12.7□□□□□ -0.38
ARHGEF40-208ENST00000557498 GALP22466 123 aa12.7□□□□□ -0.38
ARHGEF40-208ENST00000557498 TIMP3P35625 211 aa12.7□□□□□ -0.38
ARHGEF40-208ENST00000557498 PCBD1P61457 104 aa12.7□□□□□ -0.38
ARHGEF40-208ENST00000557498 FABP5Q01469 135 aa12.7□□□□□ -0.38
ARHGEF40-208ENST00000557498 MFGE8Q08431 387 aaPredicted RBP12.7□□□□□ -0.38
ARHGEF40-208ENST00000557498 SCRN3Q0VDG4 424 aa12.7□□□□□ -0.38
ARHGEF40-208ENST00000557498 FOXF2Q12947 444 aa12.7□□□□□ -0.38
ARHGEF40-208ENST00000557498 ZNF829Q3KNS6 432 aaPredicted RBP12.7□□□□□ -0.38
ARHGEF40-208ENST00000557498 CCDC92Q53HC0 331 aaPredicted RBP12.7□□□□□ -0.38
ARHGEF40-208ENST00000557498 C9orf135Q5VTT2 229 aa12.7□□□□□ -0.38
ARHGEF40-208ENST00000557498 ZNF544Q6NX49 715 aa12.7□□□□□ -0.38
ARHGEF40-208ENST00000557498 VWA1Q6PCB0 445 aa12.7□□□□□ -0.38
ARHGEF40-208ENST00000557498 RHOUQ7L0Q8 258 aa12.7□□□□□ -0.38
ARHGEF40-208ENST00000557498 SLC16A14Q7RTX9 510 aa12.7□□□□□ -0.38
ARHGEF40-208ENST00000557498 SYT9Q86SS6 491 aa12.7□□□□□ -0.38
ARHGEF40-208ENST00000557498 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.7□□□□□ -0.38
ARHGEF40-208ENST00000557498 RPRMLQ8N4K4 120 aa12.7□□□□□ -0.38
ARHGEF40-208ENST00000557498 OR2G2Q8NGZ5 317 aa12.7□□□□□ -0.38
ARHGEF40-208ENST00000557498 FBXO17Q96EF6 278 aa12.7□□□□□ -0.38
ARHGEF40-208ENST00000557498 C4orf45Q96LM5 186 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms