RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 FAM60AQ9NP50 221 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 HHLA2Q9UM44 414 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 REV3LO60673 3130 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 OIP5O43482 229 aa14.65□□□□□ -0.06
SHMT2-232ENST00000557487 IGHMP01871 453 aa14.65□□□□□ -0.06
SHMT2-232ENST00000557487 CLPSP04118 112 aa14.65□□□□□ -0.06
SHMT2-232ENST00000557487 CXCR1P25024 350 aa14.65□□□□□ -0.06
SHMT2-232ENST00000557487 NR0B2Q15466 257 aa14.65□□□□□ -0.06
SHMT2-232ENST00000557487 TAF13Q15543 124 aa14.65□□□□□ -0.06
SHMT2-232ENST00000557487 ASPHD2Q6ICH7 369 aa14.65□□□□□ -0.06
SHMT2-232ENST00000557487 LRRC69Q6ZNQ3 347 aa14.65□□□□□ -0.06
SHMT2-232ENST00000557487 FRMD1Q8N878 549 aa14.65□□□□□ -0.06
SHMT2-232ENST00000557487 GATSQ8NAP1 163 aa14.65□□□□□ -0.06
SHMT2-232ENST00000557487 PLPP7Q8NBV4 271 aa14.65□□□□□ -0.06
SHMT2-232ENST00000557487 OR13C8Q8NGS7 320 aa14.65□□□□□ -0.06
SHMT2-232ENST00000557487 STOML3Q8TAV4 291 aa14.65□□□□□ -0.06
SHMT2-232ENST00000557487 ZNF519Q8TB69 540 aa14.65□□□□□ -0.06
SHMT2-232ENST00000557487 SLC37A2Q8TED4 501 aa14.65□□□□□ -0.06
SHMT2-232ENST00000557487 C8orf44Q96CB5 159 aa14.65□□□□□ -0.06
SHMT2-232ENST00000557487 LMF1Q96S06 567 aa14.65□□□□□ -0.06
SHMT2-232ENST00000557487 PHB2Q99623 299 aa14.65□□□□□ -0.06
SHMT2-232ENST00000557487 NUDT16L1Q9BRJ7 211 aaKnown RBP14.65□□□□□ -0.06
SHMT2-232ENST00000557487 HPF1Q9NWY4 346 aa14.65□□□□□ -0.06
SHMT2-232ENST00000557487 GMEB2Q9UKD1 530 aa14.65□□□□□ -0.06
SHMT2-232ENST00000557487 EYSQ5T1H1 3165 aa14.65□□□□□ -0.06
SHMT2-232ENST00000557487 RNF222A6NCQ9 220 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 FRG2CA6NGY1 282 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 M0QYG6 137 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 FBXO45P0C2W1 286 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 COL9A1P20849 921 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 RABIFP47224 123 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 DNASE1L1P49184 302 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 ARRB1P49407 418 aaPredicted RBP14.64□□□□□ -0.07
SHMT2-232ENST00000557487 GSK3AP49840 483 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 PRKXP51817 358 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 ADAM8P78325 824 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 NAAAQ02083 359 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 ZP2Q05996 745 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 RNASE10Q5GAN6 216 aaKnown RBP14.64□□□□□ -0.07
SHMT2-232ENST00000557487 PRAMEF17Q5VTA0 474 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 CBLN3Q6UW01 205 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 ZNF704Q6ZNC4 412 aaPredicted RBP14.64□□□□□ -0.07
SHMT2-232ENST00000557487 TMEM185AQ8NFB2 350 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 AQP3Q92482 292 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 ATOH1Q92858 354 aaPredicted RBP14.64□□□□□ -0.07
SHMT2-232ENST00000557487 SLC25A44Q96H78 314 aaPredicted RBP14.64□□□□□ -0.07
SHMT2-232ENST00000557487 KXD1Q9BQD3 176 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 TAS2R4Q9NYW5 299 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 RAB22AQ9UL26 194 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 SLC22A13Q9Y226 551 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 R4GMQ9 66 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 IGLV1-36A0A0B4J1U3 117 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 H7C2Y5 167 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 HCRTR1O43613 425 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 CRABP1P29762 137 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 CASRP41180 1078 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 BTG2P78543 158 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 ELP2Q6IA86 826 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 PGAP1Q75T13 922 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 HEATR5AQ86XA9 2040 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 PPP1R1CQ8WVI7 109 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 PATE1Q8WXA2 126 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 NUDT9Q9BW91 350 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 FAM117AQ9C073 453 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 TXNIPQ9H3M7 391 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 ZNF230Q9UIE0 474 aaPredicted RBP14.64□□□□□ -0.07
SHMT2-232ENST00000557487 SPTBN5Q9NRC6 3674 aaKnown RBP14.64□□□□□ -0.07
SHMT2-232ENST00000557487 CACNA1IQ9P0X4 2223 aa14.64□□□□□ -0.07
SHMT2-232ENST00000557487 TP53BP1Q12888 1972 aaPredicted RBP14.63□□□□□ -0.07
SHMT2-232ENST00000557487 SULT2B1O00204 365 aa14.63□□□□□ -0.07
SHMT2-232ENST00000557487 FGF16O43320 207 aa14.63□□□□□ -0.07
SHMT2-232ENST00000557487 PNPP00491 289 aa14.63□□□□□ -0.07
SHMT2-232ENST00000557487 PLATP00750 562 aa14.63□□□□□ -0.07
SHMT2-232ENST00000557487 SPARCP09486 303 aa14.63□□□□□ -0.07
SHMT2-232ENST00000557487 FNTBP49356 437 aa14.63□□□□□ -0.07
SHMT2-232ENST00000557487 TAS2R31P59538 309 aa14.63□□□□□ -0.07
SHMT2-232ENST00000557487 CYCSP99999 105 aaKnown RBP14.63□□□□□ -0.07
SHMT2-232ENST00000557487 INPP5JQ15735 1006 aaPredicted RBP14.63□□□□□ -0.07
SHMT2-232ENST00000557487 PNLIPRP3Q17RR3 467 aa14.63□□□□□ -0.07
SHMT2-232ENST00000557487 DEFB110Q30KQ9 67 aa14.63□□□□□ -0.07
SHMT2-232ENST00000557487 FAM74A1Q5RGS3 127 aa14.63□□□□□ -0.07
SHMT2-232ENST00000557487 DEGS2Q6QHC5 323 aa14.63□□□□□ -0.07
SHMT2-232ENST00000557487 C5orf46Q6UWT4 87 aa14.63□□□□□ -0.07
SHMT2-232ENST00000557487 Q6ZSR6 202 aa14.63□□□□□ -0.07
SHMT2-232ENST00000557487 OR52N5Q8NH56 324 aa14.63□□□□□ -0.07
SHMT2-232ENST00000557487 TCTN2Q96GX1 697 aa14.63□□□□□ -0.07
SHMT2-232ENST00000557487 ZNF285Q96NJ3 590 aa14.63□□□□□ -0.07
SHMT2-232ENST00000557487 SLC6A7Q99884 636 aa14.63□□□□□ -0.07
SHMT2-232ENST00000557487 COL25A1Q9BXS0 654 aaPredicted RBP14.63□□□□□ -0.07
SHMT2-232ENST00000557487 WDR13Q9H1Z4 485 aa14.63□□□□□ -0.07
SHMT2-232ENST00000557487 KCNK15Q9H427 330 aa14.63□□□□□ -0.07
SHMT2-232ENST00000557487 KLK13Q9UKR3 277 aa14.63□□□□□ -0.07
SHMT2-232ENST00000557487 A0A1W2PQD3 144 aa14.62□□□□□ -0.07
SHMT2-232ENST00000557487 TMEM218A2RU14 115 aa14.62□□□□□ -0.07
SHMT2-232ENST00000557487 C9orf170A2RU37 121 aa14.62□□□□□ -0.07
SHMT2-232ENST00000557487 ALOX12BO75342 701 aa14.62□□□□□ -0.07
SHMT2-232ENST00000557487 SLC25A12O75746 678 aa14.62□□□□□ -0.07
SHMT2-232ENST00000557487 KLF8O95600 359 aaPredicted RBP14.62□□□□□ -0.07
SHMT2-232ENST00000557487 FCER2P06734 321 aa14.62□□□□□ -0.07
SHMT2-232ENST00000557487 MAOAP21397 527 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms