RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 TRAF3IP2O43734 574 aaPredicted RBP4.96□□□□□ -1.62
VPS33B-207ENST00000557470 FZD7O75084 574 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 RAB36O95755 333 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 CLPTM1O96005 669 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 NCF2P19878 526 aaPredicted RBP4.96□□□□□ -1.62
VPS33B-207ENST00000557470 GATA3P23771 443 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 GTF2E2P29084 291 aaKnown RBP4.96□□□□□ -1.62
VPS33B-207ENST00000557470 S100A5P33763 92 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 ZNF81P51508 661 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 IL13RA1P78552 427 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 LCN2P80188 198 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 HOXC5Q00444 222 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 GALK2Q01415 458 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 MAD2L1Q13257 205 aaPredicted RBP4.96□□□□□ -1.62
VPS33B-207ENST00000557470 C1DQ13901 141 aaKnown RBP4.96□□□□□ -1.62
VPS33B-207ENST00000557470 MAPK11Q15759 364 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 MEP1BQ16820 701 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 MAJINQ3KP22 176 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 LIN52Q52LA3 116 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 SPANXN4Q5MJ08 99 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 CEP85LQ5SZL2 805 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 ANXA8L1Q5VT79 327 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 CST9LP1Q5W188 147 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 THOC7Q6I9Y2 204 aaKnown RBP4.96□□□□□ -1.62
VPS33B-207ENST00000557470 FIP1L1Q6UN15 594 aaKnown RBP4.96□□□□□ -1.62
VPS33B-207ENST00000557470 RBMS3Q6XE24 437 aaKnown RBP4.96□□□□□ -1.62
VPS33B-207ENST00000557470 ZNF813Q6ZN06 617 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 DOK3Q7L591 496 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 ZNF627Q7L945 461 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 SERPINA11Q86U17 422 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 ZNF584Q8IVC4 421 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 WDFY1Q8IWB7 410 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 C20orf196Q8IYI0 205 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 CLIP4Q8N3C7 705 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 PNPT1Q8TCS8 783 aaKnown RBP4.96□□□□□ -1.62
VPS33B-207ENST00000557470 GTF3AQ92664 365 aaKnown RBP4.96□□□□□ -1.62
VPS33B-207ENST00000557470 TAAR8Q969N4 342 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 TESCQ96BS2 214 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 PPP1R36Q96LQ0 422 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 CCDC115Q96NT0 180 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 TSC22D3Q99576 134 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 TXN2Q99757 166 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 OSBPL10Q9BXB5 764 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 C11orf54Q9H0W9 315 aaPredicted RBP4.96□□□□□ -1.62
VPS33B-207ENST00000557470 NCOR1P1Q9H4R4 102 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 HINT3Q9NQE9 182 aaKnown RBP4.96□□□□□ -1.62
VPS33B-207ENST00000557470 MED29Q9NX70 200 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 TAAR3PQ9P1P4 343 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 ARMCX1Q9P291 453 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 SLC17A7Q9P2U7 560 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 SLC7A8Q9UHI5 535 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 CHST2Q9Y4C5 530 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 CACNG2Q9Y698 323 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 CMYA5Q8N3K9 4069 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 DSPPQ9NZW4 1301 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 ARHGAP32A7KAX9 2087 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 IGLV3-9A0A075B6K5 115 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 CLDN25C9JDP6 229 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 H3BS24 57 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 AIM2O14862 343 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 BIRC5O15392 142 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 AKAP8O43823 692 aaKnown RBP4.95□□□□□ -1.62
VPS33B-207ENST00000557470 OR2C1O95371 312 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 HPRP00739 348 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 PATE4P0C8F1 98 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 HLA-DOBP13765 273 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 ZNF250P15622 560 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 MDKP21741 143 aaPredicted RBP4.95□□□□□ -1.62
VPS33B-207ENST00000557470 CBLP22681 906 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 GRPRP30550 384 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 SERPINB5P36952 375 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 CDKN2CP42773 168 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 CRYBB2P43320 205 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 SLC15A1P46059 708 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 ANXA11P50995 505 aaKnown RBP4.95□□□□□ -1.62
VPS33B-207ENST00000557470 BMXP51813 675 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 KLF3P57682 345 aaPredicted RBP4.95□□□□□ -1.62
VPS33B-207ENST00000557470 GMFBP60983 142 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 ERVS71-1P61550 626 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 UFM1P61960 85 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 TXNL4AP83876 142 aaKnown RBP4.95□□□□□ -1.62
VPS33B-207ENST00000557470 GLO1Q04760 184 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 SRSF4Q08170 494 aaKnown RBP4.95□□□□□ -1.62
VPS33B-207ENST00000557470 BAMBIQ13145 260 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 HNRNPA0Q13151 305 aaKnown RBP4.95□□□□□ -1.62
VPS33B-207ENST00000557470 MFSD13AQ14CX5 517 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 SNCBQ16143 134 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 PCGF3Q3KNV8 242 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 ARMCX4Q5H9R4 360 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 KLF17Q5JT82 389 aaPredicted RBP4.95□□□□□ -1.62
VPS33B-207ENST00000557470 HIST2H2BDQ6DRA6 164 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 RGS7BPQ6MZT1 257 aaPredicted RBP4.95□□□□□ -1.62
VPS33B-207ENST00000557470 LEG1Q6P5S2 330 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 LRRC34Q8IZ02 419 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 BCL6BQ8N143 479 aaPredicted RBP4.95□□□□□ -1.62
VPS33B-207ENST00000557470 PAQR4Q8N4S7 273 aaPredicted RBP4.95□□□□□ -1.62
VPS33B-207ENST00000557470 DEFB108BQ8NET1 73 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 OR5AN1Q8NGI8 311 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 OR52P1PQ8NH57 321 aa4.95□□□□□ -1.62
VPS33B-207ENST00000557470 FGFBP3Q8TAT2 258 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms