RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 STARD10Q9Y365 291 aa11.83□□□□□ -0.52
SLIRP-210ENST00000557431 MED31Q9Y3C7 131 aa11.83□□□□□ -0.52
SLIRP-210ENST00000557431 TGP01266 2768 aa11.83□□□□□ -0.52
SLIRP-210ENST00000557431 PPIAL4EA0A075B759 164 aa11.82□□□□□ -0.52
SLIRP-210ENST00000557431 PPIAL4CA0A0B4J2A2 164 aa11.82□□□□□ -0.52
SLIRP-210ENST00000557431 CEACAM18A8MTB9 384 aa11.82□□□□□ -0.52
SLIRP-210ENST00000557431 PPIAL4DF5H284 164 aa11.82□□□□□ -0.52
SLIRP-210ENST00000557431 IMPA2O14732 288 aa11.82□□□□□ -0.52
SLIRP-210ENST00000557431 DOK2O60496 412 aa11.82□□□□□ -0.52
SLIRP-210ENST00000557431 CYB5R3P00387 301 aaPredicted RBP11.82□□□□□ -0.52
SLIRP-210ENST00000557431 RNASE1P07998 156 aaKnown RBP11.82□□□□□ -0.52
SLIRP-210ENST00000557431 PPIAL4FP0DN26 164 aa11.82□□□□□ -0.52
SLIRP-210ENST00000557431 SELEP16581 610 aa11.82□□□□□ -0.52
SLIRP-210ENST00000557431 RBM34P42696 430 aaKnown RBP11.82□□□□□ -0.52
SLIRP-210ENST00000557431 HTR5AP47898 357 aa11.82□□□□□ -0.52
SLIRP-210ENST00000557431 RPL27P61353 136 aaKnown RBP11.82□□□□□ -0.52
SLIRP-210ENST00000557431 HOXA4Q00056 320 aaPredicted RBP11.82□□□□□ -0.52
SLIRP-210ENST00000557431 INTS11Q5TA45 600 aaKnown RBP11.82□□□□□ -0.52
SLIRP-210ENST00000557431 SPATC1Q76KD6 591 aa11.82□□□□□ -0.52
SLIRP-210ENST00000557431 CCDC80Q76M96 950 aa11.82□□□□□ -0.52
SLIRP-210ENST00000557431 LRRC28Q86X40 367 aaPredicted RBP11.82□□□□□ -0.52
SLIRP-210ENST00000557431 ALDH16A1Q8IZ83 802 aa11.82□□□□□ -0.52
SLIRP-210ENST00000557431 SPICQ8N5J4 248 aa11.82□□□□□ -0.52
SLIRP-210ENST00000557431 LRRC75AQ8NAA5 344 aa11.82□□□□□ -0.52
SLIRP-210ENST00000557431 OR10AD1Q8NGE0 317 aa11.82□□□□□ -0.52
SLIRP-210ENST00000557431 OR51A7Q8NH64 312 aa11.82□□□□□ -0.52
SLIRP-210ENST00000557431 CMBLQ96DG6 245 aa11.82□□□□□ -0.52
SLIRP-210ENST00000557431 MRI1Q9BV20 369 aa11.82□□□□□ -0.52
SLIRP-210ENST00000557431 ELOVL3Q9HB03 270 aa11.82□□□□□ -0.52
SLIRP-210ENST00000557431 GMPR2Q9P2T1 348 aaKnown RBP11.82□□□□□ -0.52
SLIRP-210ENST00000557431 HIF3AQ9Y2N7 669 aa11.82□□□□□ -0.52
SLIRP-210ENST00000557431 TIMM10BQ9Y5J6 103 aa11.82□□□□□ -0.52
SLIRP-210ENST00000557431 A8MXK9 166 aa11.81□□□□□ -0.52
SLIRP-210ENST00000557431 H0YL77 283 aa11.81□□□□□ -0.52
SLIRP-210ENST00000557431 J3KTA2 159 aa11.81□□□□□ -0.52
SLIRP-210ENST00000557431 OR5F1O95221 314 aa11.81□□□□□ -0.52
SLIRP-210ENST00000557431 MSR1P21757 451 aa11.81□□□□□ -0.52
SLIRP-210ENST00000557431 MMP16P51512 607 aa11.81□□□□□ -0.52
SLIRP-210ENST00000557431 ARHGDIAP52565 204 aa11.81□□□□□ -0.52
SLIRP-210ENST00000557431 DBPQ10586 325 aaPredicted RBP11.81□□□□□ -0.52
SLIRP-210ENST00000557431 SF3A3Q12874 501 aaKnown RBP eCLIP11.81□□□□□ -0.52
SLIRP-210ENST00000557431 TMEM155Q4W5P6 130 aa11.81□□□□□ -0.52
SLIRP-210ENST00000557431 LRRC23Q53EV4 343 aaPredicted RBP11.81□□□□□ -0.52
SLIRP-210ENST00000557431 ESCO2Q56NI9 601 aa11.81□□□□□ -0.52
SLIRP-210ENST00000557431 NANOGP8Q6NSW7 305 aa11.81□□□□□ -0.52
SLIRP-210ENST00000557431 BRD3OSQ6XYD6 125 aa11.81□□□□□ -0.52
SLIRP-210ENST00000557431 FOXL2NBQ6ZUU3 175 aa11.81□□□□□ -0.52
SLIRP-210ENST00000557431 SLC30A8Q8IWU4 369 aa11.81□□□□□ -0.52
SLIRP-210ENST00000557431 C19orf18Q8NEA5 215 aa11.81□□□□□ -0.52
SLIRP-210ENST00000557431 OR52E2Q8NGJ4 325 aa11.81□□□□□ -0.52
SLIRP-210ENST00000557431 OR13C2Q8NGS9 318 aa11.81□□□□□ -0.52
SLIRP-210ENST00000557431 TPD52L3Q96J77 140 aa11.81□□□□□ -0.52
SLIRP-210ENST00000557431 RBP7Q96R05 134 aa11.81□□□□□ -0.52
SLIRP-210ENST00000557431 GPA33Q99795 319 aa11.81□□□□□ -0.52
SLIRP-210ENST00000557431 ALG12Q9BV10 488 aa11.81□□□□□ -0.52
SLIRP-210ENST00000557431 POLE4Q9NR33 117 aa11.81□□□□□ -0.52
SLIRP-210ENST00000557431 PTTG3PQ9NZH4 202 aa11.81□□□□□ -0.52
SLIRP-210ENST00000557431 STX18Q9P2W9 335 aaKnown RBP11.81□□□□□ -0.52
SLIRP-210ENST00000557431 CGGBP1Q9UFW8 167 aaPredicted RBP11.81□□□□□ -0.52
SLIRP-210ENST00000557431 OR5V1Q9UGF6 321 aa11.81□□□□□ -0.52
SLIRP-210ENST00000557431 PPP1R3CQ9UQK1 317 aa11.81□□□□□ -0.52
SLIRP-210ENST00000557431 POLR3KQ9Y2Y1 108 aaPredicted RBP11.81□□□□□ -0.52
SLIRP-210ENST00000557431 ADAM18Q9Y3Q7 739 aa11.81□□□□□ -0.52
SLIRP-210ENST00000557431 TMEM178BH3BS89 294 aa11.8□□□□□ -0.52
SLIRP-210ENST00000557431 HOXA3O43365 443 aaPredicted RBP11.8□□□□□ -0.52
SLIRP-210ENST00000557431 DBHP09172 617 aa11.8□□□□□ -0.52
SLIRP-210ENST00000557431 RPS2P15880 293 aaKnown RBP11.8□□□□□ -0.52
SLIRP-210ENST00000557431 GSTM3P21266 225 aa11.8□□□□□ -0.52
SLIRP-210ENST00000557431 LIPAP38571 399 aa11.8□□□□□ -0.52
SLIRP-210ENST00000557431 PAX2Q02962 417 aa11.8□□□□□ -0.52
SLIRP-210ENST00000557431 PAX8Q06710 450 aa11.8□□□□□ -0.52
SLIRP-210ENST00000557431 FHL1Q13642 323 aa11.8□□□□□ -0.52
SLIRP-210ENST00000557431 HLXQ14774 488 aaPredicted RBP11.8□□□□□ -0.52
SLIRP-210ENST00000557431 ZMAT1Q5H9K5 638 aa11.8□□□□□ -0.52
SLIRP-210ENST00000557431 UNQ6126/PRO20091Q6UXV3 157 aa11.8□□□□□ -0.52
SLIRP-210ENST00000557431 CALHM3Q86XJ0 350 aa11.8□□□□□ -0.52
SLIRP-210ENST00000557431 NRMQ8IXM6 262 aa11.8□□□□□ -0.52
SLIRP-210ENST00000557431 RASSF5Q8WWW0 418 aa11.8□□□□□ -0.52
SLIRP-210ENST00000557431 LIPHQ8WWY8 451 aa11.8□□□□□ -0.52
SLIRP-210ENST00000557431 SLC25A28Q96A46 364 aa11.8□□□□□ -0.52
SLIRP-210ENST00000557431 BPIFA2Q96DR5 249 aa11.8□□□□□ -0.52
SLIRP-210ENST00000557431 SAMD8Q96LT4 415 aa11.8□□□□□ -0.52
SLIRP-210ENST00000557431 RERGLQ9H628 205 aa11.8□□□□□ -0.52
SLIRP-210ENST00000557431 A4GNTQ9UNA3 340 aa11.8□□□□□ -0.52
SLIRP-210ENST00000557431 SNX13Q9Y5W8 968 aa11.8□□□□□ -0.52
SLIRP-210ENST00000557431 NPIPB13A6NJU9 1138 aa11.79□□□□□ -0.52
SLIRP-210ENST00000557431 NPIPB4C9JG80 1138 aa11.79□□□□□ -0.52
SLIRP-210ENST00000557431 H3BSA7 217 aa11.79□□□□□ -0.52
SLIRP-210ENST00000557431 FXYD1O00168 92 aa11.79□□□□□ -0.52
SLIRP-210ENST00000557431 SGCEO43556 437 aa11.79□□□□□ -0.52
SLIRP-210ENST00000557431 ICMTO60725 284 aa11.79□□□□□ -0.52
SLIRP-210ENST00000557431 EDF1O60869 148 aaKnown RBP11.79□□□□□ -0.52
SLIRP-210ENST00000557431 WNT2P09544 360 aa11.79□□□□□ -0.52
SLIRP-210ENST00000557431 TNFRSF1AP19438 455 aa11.79□□□□□ -0.52
SLIRP-210ENST00000557431 KITLGP21583 273 aa11.79□□□□□ -0.52
SLIRP-210ENST00000557431 TNFSF4P23510 183 aa11.79□□□□□ -0.52
SLIRP-210ENST00000557431 MDH2P40926 338 aaKnown RBP11.79□□□□□ -0.52
SLIRP-210ENST00000557431 GPR4P46093 362 aa11.79□□□□□ -0.52
SLIRP-210ENST00000557431 IL13RA1P78552 427 aa11.79□□□□□ -0.52
SLIRP-210ENST00000557431 DEFB112Q30KQ8 113 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms