RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 ZNF3P17036 446 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 FASP25445 335 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 GRK5P34947 590 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 TEKQ02763 1124 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 CCNIQ14094 377 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 CLEC2AQ6UVW9 174 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 HIPK1Q86Z02 1210 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 ATG16L2Q8NAA4 619 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 SLC37A3Q8NCC5 494 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 GJC3Q8NFK1 279 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 OR1J1Q8NGS3 322 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 OR4Q3Q8NH05 313 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 OR5K1Q8NHB7 308 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 UTP4Q969X6 686 aaKnown RBP10.75□□□□□ -0.69
SLIRP-209ENST00000557342 VRK1Q99986 396 aaPredicted RBP10.75□□□□□ -0.69
SLIRP-209ENST00000557342 CDADC1Q9BWV3 514 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 TEX12Q9BXU0 123 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 MRPL37Q9BZE1 423 aaKnown RBP10.75□□□□□ -0.69
SLIRP-209ENST00000557342 OR51B6Q9H340 312 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 MS4A5Q9H3V2 200 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 ELOVL3Q9HB03 270 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 NTN4Q9HB63 628 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 MYOZ1Q9NP98 299 aaPredicted RBP10.75□□□□□ -0.69
SLIRP-209ENST00000557342 DLL4Q9NR61 685 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 PLEK2Q9NYT0 353 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 KIF17Q9P2E2 1029 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 ASH2LQ9UBL3 628 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 ATPIF1Q9UII2 106 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 GPR160Q9UJ42 338 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 FAM171A2A8MVW0 826 aa10.74□□□□□ -0.69
SLIRP-209ENST00000557342 M0R233 179 aa10.74□□□□□ -0.69
SLIRP-209ENST00000557342 SYNGR3O43761 229 aa10.74□□□□□ -0.69
SLIRP-209ENST00000557342 ICMTO60725 284 aa10.74□□□□□ -0.69
SLIRP-209ENST00000557342 IGFBP1P08833 259 aaPredicted RBP10.74□□□□□ -0.69
SLIRP-209ENST00000557342 INHBBP09529 407 aa10.74□□□□□ -0.69
SLIRP-209ENST00000557342 ZNF250P15622 560 aa10.74□□□□□ -0.69
SLIRP-209ENST00000557342 ZNF823P16415 610 aa10.74□□□□□ -0.69
SLIRP-209ENST00000557342 HTR5AP47898 357 aa10.74□□□□□ -0.69
SLIRP-209ENST00000557342 SLC25A1P53007 311 aa10.74□□□□□ -0.69
SLIRP-209ENST00000557342 ATP6AP1Q15904 470 aa10.74□□□□□ -0.69
SLIRP-209ENST00000557342 MOGQ16653 247 aa10.74□□□□□ -0.69
SLIRP-209ENST00000557342 ZNF718Q3SXZ3 478 aa10.74□□□□□ -0.69
SLIRP-209ENST00000557342 ZNF362Q5T0B9 420 aaPredicted RBP10.74□□□□□ -0.69
SLIRP-209ENST00000557342 SLC27A4Q6P1M0 643 aa10.74□□□□□ -0.69
SLIRP-209ENST00000557342 DNM1P46Q6ZS02 220 aa10.74□□□□□ -0.69
SLIRP-209ENST00000557342 VASH1Q7L8A9 365 aaPredicted RBP10.74□□□□□ -0.69
SLIRP-209ENST00000557342 C10orf67Q8IYJ2 551 aa10.74□□□□□ -0.69
SLIRP-209ENST00000557342 HS3ST5Q8IZT8 346 aa10.74□□□□□ -0.69
SLIRP-209ENST00000557342 CYB561A3Q8NBI2 242 aa10.74□□□□□ -0.69
SLIRP-209ENST00000557342 PROKR2Q8NFJ6 384 aa10.74□□□□□ -0.69
SLIRP-209ENST00000557342 SLC26A10Q8NG04 563 aa10.74□□□□□ -0.69
SLIRP-209ENST00000557342 OR2AJ1Q8NGZ0 328 aa10.74□□□□□ -0.69
SLIRP-209ENST00000557342 SYNPRQ8TBG9 265 aa10.74□□□□□ -0.69
SLIRP-209ENST00000557342 NEU4Q8WWR8 484 aaPredicted RBP10.74□□□□□ -0.69
SLIRP-209ENST00000557342 C4orf45Q96LM5 186 aa10.74□□□□□ -0.69
SLIRP-209ENST00000557342 SORCS2Q96PQ0 1159 aa10.74□□□□□ -0.69
SLIRP-209ENST00000557342 RAB3IPQ96QF0 476 aaPredicted RBP10.74□□□□□ -0.69
SLIRP-209ENST00000557342 DDOQ99489 341 aa10.74□□□□□ -0.69
SLIRP-209ENST00000557342 SYT3Q9BQG1 590 aa10.74□□□□□ -0.69
SLIRP-209ENST00000557342 RHNO1Q9BSD3 238 aa10.74□□□□□ -0.69
SLIRP-209ENST00000557342 FN3KQ9H479 309 aa10.74□□□□□ -0.69
SLIRP-209ENST00000557342 CMC2Q9NRP2 79 aa10.74□□□□□ -0.69
SLIRP-209ENST00000557342 SLCO1C1Q9NYB5 712 aa10.74□□□□□ -0.69
SLIRP-209ENST00000557342 REV1Q9UBZ9 1251 aa10.74□□□□□ -0.69
SLIRP-209ENST00000557342 DUSP13Q9UII6 198 aa10.74□□□□□ -0.69
SLIRP-209ENST00000557342 KCNG2Q9UJ96 466 aa10.74□□□□□ -0.69
SLIRP-209ENST00000557342 F8P00451 2351 aa10.74□□□□□ -0.69
SLIRP-209ENST00000557342 ITPR3Q14573 2671 aa10.73□□□□□ -0.69
SLIRP-209ENST00000557342 RTTNQ86VV8 2226 aa10.73□□□□□ -0.69
SLIRP-209ENST00000557342 A0A1W2PPW3 197 aa10.73□□□□□ -0.69
SLIRP-209ENST00000557342 TRIM64A6NGJ6 449 aa10.73□□□□□ -0.69
SLIRP-209ENST00000557342 TRIM64BA6NI03 449 aa10.73□□□□□ -0.69
SLIRP-209ENST00000557342 H3BSA7 217 aa10.73□□□□□ -0.69
SLIRP-209ENST00000557342 H7C1Q1 480 aa10.73□□□□□ -0.69
SLIRP-209ENST00000557342 GPANK1O95872 356 aa10.73□□□□□ -0.69
SLIRP-209ENST00000557342 HMGN1P05114 100 aa10.73□□□□□ -0.69
SLIRP-209ENST00000557342 ADRA2AP08913 450 aa10.73□□□□□ -0.69
SLIRP-209ENST00000557342 PRKACGP22612 351 aa10.73□□□□□ -0.69
SLIRP-209ENST00000557342 TUBG1P23258 451 aa10.73□□□□□ -0.69
SLIRP-209ENST00000557342 POU1F1P28069 291 aa10.73□□□□□ -0.69
SLIRP-209ENST00000557342 GCH1P30793 250 aa10.73□□□□□ -0.69
SLIRP-209ENST00000557342 BLVRAP53004 296 aa10.73□□□□□ -0.69
SLIRP-209ENST00000557342 KLF3P57682 345 aaPredicted RBP10.73□□□□□ -0.69
SLIRP-209ENST00000557342 TNK1Q13470 666 aa10.73□□□□□ -0.69
SLIRP-209ENST00000557342 CRMP1Q14194 572 aa10.73□□□□□ -0.69
SLIRP-209ENST00000557342 MEP1BQ16820 701 aa10.73□□□□□ -0.69
SLIRP-209ENST00000557342 MSMPQ1L6U9 139 aa10.73□□□□□ -0.69
SLIRP-209ENST00000557342 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.73□□□□□ -0.69
SLIRP-209ENST00000557342 BIVMQ86UB2 503 aa10.73□□□□□ -0.69
SLIRP-209ENST00000557342 ICA1LQ8NDH6 482 aa10.73□□□□□ -0.69
SLIRP-209ENST00000557342 OR1F12Q8NHA8 337 aa10.73□□□□□ -0.69
SLIRP-209ENST00000557342 IPCEF1Q8WWN9 437 aaPredicted RBP10.73□□□□□ -0.69
SLIRP-209ENST00000557342 COX4I2Q96KJ9 171 aa10.73□□□□□ -0.69
SLIRP-209ENST00000557342 COG8Q96MW5 612 aa10.73□□□□□ -0.69
SLIRP-209ENST00000557342 DCLRE1CQ96SD1 692 aaKnown RBP10.73□□□□□ -0.69
SLIRP-209ENST00000557342 COQ7Q99807 217 aa10.73□□□□□ -0.69
SLIRP-209ENST00000557342 RBM4Q9BWF3 364 aaKnown RBP10.73□□□□□ -0.69
SLIRP-209ENST00000557342 HDHD2Q9H0R4 259 aa10.73□□□□□ -0.69
SLIRP-209ENST00000557342 TUBG2Q9NRH3 451 aa10.73□□□□□ -0.69
SLIRP-209ENST00000557342 PAPOLBQ9NRJ5 636 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms