RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 CMBLQ96DG6 245 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 NAT8BQ9UHF3 227 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 MYO16Q9Y6X6 1858 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 XRN1Q8IZH2 1706 aaKnown RBP8.14□□□□□ -1.11
SYNE3-205ENST00000557275 NUP98P52948 1817 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 FAM87AP0C7U9 286 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 FABP2P12104 132 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 CD80P33681 288 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 GLYATL3Q5SZD4 288 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 IP6K3Q96PC2 410 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 FZD8Q9H461 694 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 LGI1O95970 557 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 OR5AP2Q8NGF4 316 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 MMP24Q9Y5R2 645 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 BCL9LQ86UU0 1499 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 TCN2P20062 427 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 IL1R2P27930 398 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 GCAP28676 217 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 GALR1P47211 349 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 SRSF9Q13242 221 aaKnown RBP eCLIP8.14□□□□□ -1.11
SYNE3-205ENST00000557275 SMIM21Q3B7S5 101 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 CBARPQ8N350 705 aaPredicted RBP8.14□□□□□ -1.11
SYNE3-205ENST00000557275 C2CD4CQ8TF44 421 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 PEX11GQ96HA9 241 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 HRASLS5Q96KN8 279 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 GPR61Q9BZJ8 451 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 SLC45A2Q9UMX9 530 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 TMEM129A0AVI4 362 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 CDRT15L2A8MXV6 281 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 MMP11P24347 488 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 RPL12P30050 165 aaKnown RBP8.14□□□□□ -1.11
SYNE3-205ENST00000557275 OR7E24Q6IFN5 339 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 DRAM2Q6UX65 266 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 ISG20Q96AZ6 181 aaKnown RBP8.14□□□□□ -1.11
SYNE3-205ENST00000557275 POM121L2Q96KW2 1035 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 RNF2Q99496 336 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 A0A0U1RQJ8 604 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 PIPP12273 146 aaPredicted RBP8.14□□□□□ -1.11
SYNE3-205ENST00000557275 DLX1P56177 255 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 HAGHQ16775 308 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 CLLU1Q5K131 121 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 DTWD2Q8NBA8 298 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 CYB561A3Q8NBI2 242 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 OR5D13Q8NGL4 314 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 WDR1O75083 606 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 ACTL6AO96019 429 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 ERVS71-1P61550 626 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 ALKBH1Q13686 389 aaKnown RBP8.14□□□□□ -1.11
SYNE3-205ENST00000557275 IL17AQ16552 155 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 HIST3H3Q16695 136 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 YOD1Q5VVQ6 348 aaPredicted RBP8.14□□□□□ -1.11
SYNE3-205ENST00000557275 DND1Q8IYX4 353 aaKnown RBP8.14□□□□□ -1.11
SYNE3-205ENST00000557275 GOT1L1Q8NHS2 421 aaPredicted RBP8.14□□□□□ -1.11
SYNE3-205ENST00000557275 SLC25A33Q9BSK2 321 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 ALOXE3Q9BYJ1 711 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 TAS2R5Q9NYW4 299 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 ZNF716A6NP11 495 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 HOXC13P31276 330 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 ELLP55199 621 aaPredicted RBP8.14□□□□□ -1.11
SYNE3-205ENST00000557275 NDRG1Q92597 394 aaKnown RBP8.14□□□□□ -1.11
SYNE3-205ENST00000557275 AMBRA1Q9C0C7 1298 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 DUXBA0A1W2PPF3 345 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 RAD1O60671 282 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 SPINT3P49223 89 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 SLC10A2Q12908 348 aaPredicted RBP8.14□□□□□ -1.11
SYNE3-205ENST00000557275 BAP18Q8IXM2 172 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 Q8IYB0 196 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 PRSS3P2Q8NHM4 247 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 UBE2ZQ9H832 354 aaPredicted RBP8.14□□□□□ -1.11
SYNE3-205ENST00000557275 ADM5C9JUS6 153 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 TMEM11P17152 192 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 VASPP50552 380 aaPredicted RBP8.14□□□□□ -1.11
SYNE3-205ENST00000557275 DLK1P80370 383 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 HOXA4Q00056 320 aaPredicted RBP8.14□□□□□ -1.11
SYNE3-205ENST00000557275 DHRS7BQ6IAN0 325 aaPredicted RBP8.14□□□□□ -1.11
SYNE3-205ENST00000557275 CYHR1Q6ZMK1 362 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 TMEM178AQ8NBL3 297 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 OR4S1Q8NGB4 309 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 BRI3BPQ8WY22 251 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 NTNG2Q96CW9 530 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 GOSR1O95249 250 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 YBX1P67809 324 aaKnown RBP8.14□□□□□ -1.11
SYNE3-205ENST00000557275 TRMT12Q53H54 448 aaKnown RBP8.14□□□□□ -1.11
SYNE3-205ENST00000557275 DHRS13Q6UX07 377 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 SIAH3Q8IW03 269 aa8.14□□□□□ -1.11
SYNE3-205ENST00000557275 NME4O00746 187 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 SLC35B3Q9H1N7 401 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 DMAC2Q9NW81 257 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 ACOT8O14734 319 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 AQP8O94778 261 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 HAPLN1P10915 354 aaPredicted RBP8.13□□□□□ -1.11
SYNE3-205ENST00000557275 PMS2P11Q13670 270 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 ENTPD8Q5MY95 495 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 WDR74Q6RFH5 385 aaPredicted RBP8.13□□□□□ -1.11
SYNE3-205ENST00000557275 BPIFA4PQ86YQ2 179 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 ARHGEF39Q8N4T4 335 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 CHST14Q8NCH0 376 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 TMEM56Q96MV1 263 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 OR4C12Q96R67 309 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 PEBP4Q96S96 227 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms