RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 ISPDA4D126 451 aa13.45□□□□□ -0.26
TUBB3-213ENST00000557262 H7C1C5 153 aa13.45□□□□□ -0.26
TUBB3-213ENST00000557262 TRIM77I1YAP6 450 aa13.45□□□□□ -0.26
TUBB3-213ENST00000557262 XKRYO14609 159 aa13.45□□□□□ -0.26
TUBB3-213ENST00000557262 TIMM8AO60220 97 aaPredicted RBP13.45□□□□□ -0.26
TUBB3-213ENST00000557262 CD14P08571 375 aa13.45□□□□□ -0.26
TUBB3-213ENST00000557262 GSTM3P21266 225 aa13.45□□□□□ -0.26
TUBB3-213ENST00000557262 CFPP27918 469 aa13.45□□□□□ -0.26
TUBB3-213ENST00000557262 LCN6P62502 163 aa13.45□□□□□ -0.26
TUBB3-213ENST00000557262 TNFAIP6P98066 277 aaPredicted RBP13.45□□□□□ -0.26
TUBB3-213ENST00000557262 SCRN3Q0VDG4 424 aa13.45□□□□□ -0.26
TUBB3-213ENST00000557262 CDK5R2Q13319 367 aa13.45□□□□□ -0.26
TUBB3-213ENST00000557262 SPRNQ5BIV9 151 aa13.45□□□□□ -0.26
TUBB3-213ENST00000557262 FAM156AQ8NDB6 213 aa13.45□□□□□ -0.26
TUBB3-213ENST00000557262 ST7LQ8TDW4 575 aa13.45□□□□□ -0.26
TUBB3-213ENST00000557262 FAM216AQ8WUB2 273 aa13.45□□□□□ -0.26
TUBB3-213ENST00000557262 Q96M85 177 aa13.45□□□□□ -0.26
TUBB3-213ENST00000557262 HOPXQ9BPY8 73 aaPredicted RBP13.45□□□□□ -0.26
TUBB3-213ENST00000557262 C7orf69Q9H7B7 122 aa13.45□□□□□ -0.26
TUBB3-213ENST00000557262 EMC7Q9NPA0 242 aa13.45□□□□□ -0.26
TUBB3-213ENST00000557262 CDC42EP2O14613 210 aa13.44□□□□□ -0.26
TUBB3-213ENST00000557262 PRSS23O95084 383 aa13.44□□□□□ -0.26
TUBB3-213ENST00000557262 ABHD16AO95870 558 aa13.44□□□□□ -0.26
TUBB3-213ENST00000557262 COX4I1P13073 169 aa13.44□□□□□ -0.26
TUBB3-213ENST00000557262 GPR4P46093 362 aa13.44□□□□□ -0.26
TUBB3-213ENST00000557262 NPEPL1Q8NDH3 523 aa13.44□□□□□ -0.26
TUBB3-213ENST00000557262 GCDHQ92947 438 aaPredicted RBP13.44□□□□□ -0.26
TUBB3-213ENST00000557262 CMBLQ96DG6 245 aa13.44□□□□□ -0.26
TUBB3-213ENST00000557262 SAMD8Q96LT4 415 aa13.44□□□□□ -0.26
TUBB3-213ENST00000557262 SUCNR1Q9BXA5 334 aa13.44□□□□□ -0.26
TUBB3-213ENST00000557262 NDEL1Q9GZM8 345 aa13.44□□□□□ -0.26
TUBB3-213ENST00000557262 ANKRD19PQ9H560 264 aa13.44□□□□□ -0.26
TUBB3-213ENST00000557262 EFCAB1Q9HAE3 211 aa13.44□□□□□ -0.26
TUBB3-213ENST00000557262 NMNAT1Q9HAN9 279 aaPredicted RBP13.44□□□□□ -0.26
TUBB3-213ENST00000557262 UBAP1Q9NZ09 502 aa13.44□□□□□ -0.26
TUBB3-213ENST00000557262 PURGQ9UJV8 347 aaKnown RBP13.44□□□□□ -0.26
TUBB3-213ENST00000557262 ADAM18Q9Y3Q7 739 aa13.44□□□□□ -0.26
TUBB3-213ENST00000557262 NPTNQ9Y639 398 aa13.44□□□□□ -0.26
TUBB3-213ENST00000557262 TMEM89A2RUT3 159 aa13.43□□□□□ -0.26
TUBB3-213ENST00000557262 PRSS37A4D1T9 235 aa13.43□□□□□ -0.26
TUBB3-213ENST00000557262 NME4O00746 187 aa13.43□□□□□ -0.26
TUBB3-213ENST00000557262 SGCEO43556 437 aa13.43□□□□□ -0.26
TUBB3-213ENST00000557262 DOK2O60496 412 aa13.43□□□□□ -0.26
TUBB3-213ENST00000557262 PTP4A3O75365 173 aa13.43□□□□□ -0.26
TUBB3-213ENST00000557262 FOXH1O75593 365 aa13.43□□□□□ -0.26
TUBB3-213ENST00000557262 SERPINA1P01009 418 aa13.43□□□□□ -0.26
TUBB3-213ENST00000557262 SBK2P0C263 348 aa13.43□□□□□ -0.26
TUBB3-213ENST00000557262 ZNF26P17031 533 aaPredicted RBP13.43□□□□□ -0.26
TUBB3-213ENST00000557262 ADRA2CP18825 462 aa13.43□□□□□ -0.26
TUBB3-213ENST00000557262 TNFRSF1AP19438 455 aa13.43□□□□□ -0.26
TUBB3-213ENST00000557262 KITLGP21583 273 aa13.43□□□□□ -0.26
TUBB3-213ENST00000557262 TNFSF4P23510 183 aa13.43□□□□□ -0.26
TUBB3-213ENST00000557262 HTR5AP47898 357 aa13.43□□□□□ -0.26
TUBB3-213ENST00000557262 COMPP49747 757 aaPredicted RBP13.43□□□□□ -0.26
TUBB3-213ENST00000557262 ACTG1P63261 375 aa13.43□□□□□ -0.26
TUBB3-213ENST00000557262 LCN2P80188 198 aa13.43□□□□□ -0.26
TUBB3-213ENST00000557262 MESTQ5EB52 335 aa13.43□□□□□ -0.26
TUBB3-213ENST00000557262 ZNF771Q7L3S4 317 aaPredicted RBP13.43□□□□□ -0.26
TUBB3-213ENST00000557262 FAM122BQ7Z309 247 aa13.43□□□□□ -0.26
TUBB3-213ENST00000557262 CYP4Z1Q86W10 505 aa13.43□□□□□ -0.26
TUBB3-213ENST00000557262 PTP4A1Q93096 173 aa13.43□□□□□ -0.26
TUBB3-213ENST00000557262 HAVCR1Q96D42 359 aa13.43□□□□□ -0.26
TUBB3-213ENST00000557262 HSH2DQ96JZ2 352 aa13.43□□□□□ -0.26
TUBB3-213ENST00000557262 COG8Q96MW5 612 aa13.43□□□□□ -0.26
TUBB3-213ENST00000557262 ZNF570Q96NI8 536 aa13.43□□□□□ -0.26
TUBB3-213ENST00000557262 DCLRE1CQ96SD1 692 aaKnown RBP13.43□□□□□ -0.26
TUBB3-213ENST00000557262 RBM4Q9BWF3 364 aaKnown RBP13.43□□□□□ -0.26
TUBB3-213ENST00000557262 OPN4Q9UHM6 478 aa13.43□□□□□ -0.26
TUBB3-213ENST00000557262 TMEM5Q9Y2B1 443 aa13.43□□□□□ -0.26
TUBB3-213ENST00000557262 STARD10Q9Y365 291 aa13.43□□□□□ -0.26
TUBB3-213ENST00000557262 ENPP4Q9Y6X5 453 aa13.43□□□□□ -0.26
TUBB3-213ENST00000557262 WNK2Q9Y3S1 2297 aa13.43□□□□□ -0.26
TUBB3-213ENST00000557262 PPIAL4EA0A075B759 164 aa13.42□□□□□ -0.26
TUBB3-213ENST00000557262 PPIAL4CA0A0B4J2A2 164 aa13.42□□□□□ -0.26
TUBB3-213ENST00000557262 TEX13CA0A0J9YWL9 993 aa13.42□□□□□ -0.26
TUBB3-213ENST00000557262 PPIAL4DF5H284 164 aa13.42□□□□□ -0.26
TUBB3-213ENST00000557262 NDUFAB1O14561 156 aa13.42□□□□□ -0.26
TUBB3-213ENST00000557262 CCDC22O60826 627 aa13.42□□□□□ -0.26
TUBB3-213ENST00000557262 IGHV2-70P01814 119 aa13.42□□□□□ -0.26
TUBB3-213ENST00000557262 PPIAL4FP0DN26 164 aa13.42□□□□□ -0.26
TUBB3-213ENST00000557262 FPR2P25090 351 aa13.42□□□□□ -0.26
TUBB3-213ENST00000557262 LIMS1P48059 325 aa13.42□□□□□ -0.26
TUBB3-213ENST00000557262 GSK3BP49841 420 aa13.42□□□□□ -0.26
TUBB3-213ENST00000557262 SLC7A2P52569 658 aa13.42□□□□□ -0.26
TUBB3-213ENST00000557262 GUCY1A3Q02108 690 aa13.42□□□□□ -0.26
TUBB3-213ENST00000557262 GPR139Q6DWJ6 353 aa13.42□□□□□ -0.26
TUBB3-213ENST00000557262 VASH1Q7L8A9 365 aaPredicted RBP13.42□□□□□ -0.26
TUBB3-213ENST00000557262 TSEN54Q7Z6J9 526 aaKnown RBP13.42□□□□□ -0.26
TUBB3-213ENST00000557262 OR2Z1Q8NG97 314 aa13.42□□□□□ -0.26
TUBB3-213ENST00000557262 SLC7A13Q8TCU3 470 aa13.42□□□□□ -0.26
TUBB3-213ENST00000557262 POFUT1Q9H488 388 aa13.42□□□□□ -0.26
TUBB3-213ENST00000557262 CCDC134Q9H6E4 229 aa13.42□□□□□ -0.26
TUBB3-213ENST00000557262 TMEM106BQ9NUM4 274 aa13.42□□□□□ -0.26
TUBB3-213ENST00000557262 DCAF16Q9NXF7 216 aa13.42□□□□□ -0.26
TUBB3-213ENST00000557262 PLEK2Q9NYT0 353 aa13.42□□□□□ -0.26
TUBB3-213ENST00000557262 IL19Q9UHD0 177 aa13.42□□□□□ -0.26
TUBB3-213ENST00000557262 EGFL7Q9UHF1 273 aa13.42□□□□□ -0.26
TUBB3-213ENST00000557262 SURF4O15260 269 aa13.41□□□□□ -0.26
TUBB3-213ENST00000557262 SLC16A7O60669 478 aa13.41□□□□□ -0.26
TUBB3-213ENST00000557262 KHDRBS3O75525 346 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms