RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 IGLV3-21P80748 117 aaPredicted RBP10.24□□□□□ -0.77
SRP54-213ENST00000556994 INSM1Q01101 510 aaPredicted RBP10.24□□□□□ -0.77
SRP54-213ENST00000556994 ZNF117Q03924 483 aa10.24□□□□□ -0.77
SRP54-213ENST00000556994 PPP1R1AQ13522 171 aa10.24□□□□□ -0.77
SRP54-213ENST00000556994 CDNFQ49AH0 187 aa10.24□□□□□ -0.77
SRP54-213ENST00000556994 TEX30Q5JUR7 227 aa10.24□□□□□ -0.77
SRP54-213ENST00000556994 KCTD9Q7L273 389 aa10.24□□□□□ -0.77
SRP54-213ENST00000556994 OR1S2Q8NGQ3 325 aa10.24□□□□□ -0.77
SRP54-213ENST00000556994 OR10Z1Q8NGY1 313 aa10.24□□□□□ -0.77
SRP54-213ENST00000556994 CASTOR1Q8WTX7 329 aa10.24□□□□□ -0.77
SRP54-213ENST00000556994 GAL3ST4Q96RP7 486 aa10.24□□□□□ -0.77
SRP54-213ENST00000556994 MAP3K3Q99759 626 aa10.24□□□□□ -0.77
SRP54-213ENST00000556994 ABHD6Q9BV23 337 aa10.24□□□□□ -0.77
SRP54-213ENST00000556994 PRMT8Q9NR22 394 aaPredicted RBP10.24□□□□□ -0.77
SRP54-213ENST00000556994 CKLFQ9UBR5 152 aa10.24□□□□□ -0.77
SRP54-213ENST00000556994 GMEB2Q9UKD1 530 aa10.24□□□□□ -0.77
SRP54-213ENST00000556994 EMC9Q9Y3B6 208 aa10.24□□□□□ -0.77
SRP54-213ENST00000556994 LRP12Q9Y561 859 aa10.24□□□□□ -0.77
SRP54-213ENST00000556994 LOC101059948A0A1B0GTJ6 334 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 PRSS37A4D1T9 235 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 WIPF3A6NGB9 483 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 EEF1E1-BLOC1S5C9J1V9 151 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 F5H0A9 414 aaPredicted RBP10.23□□□□□ -0.77
SRP54-213ENST00000556994 PHYHO14832 338 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 DCNP07585 359 aaKnown RBP10.23□□□□□ -0.77
SRP54-213ENST00000556994 MELTFP08582 738 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 PPIAP62937 165 aaKnown RBP10.23□□□□□ -0.77
SRP54-213ENST00000556994 FGL1Q08830 312 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 PRTGQ2VWP7 1150 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 PRAMEF17Q5VTA0 474 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 SLC18B1Q6NT16 456 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 TMEM17Q86X19 198 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 LINC00518Q8N0U6 118 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 OR13C3Q8NGS6 347 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 FAM46BQ96A09 425 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 CST11Q9H112 138 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 SLC6A15Q9H2J7 730 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 SLC17A5Q9NRA2 495 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 ASF1BQ9NVP2 202 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 PCDHB10Q9UN67 800 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 A0A1B0GW55 424 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 B4DGG1 531 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 BGLAPP02818 100 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 CD2P06729 351 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 DUX4L2P0CJ85 424 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 DUX4L3P0CJ86 424 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 DUX4L4P0CJ87 422 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 DUX4L5P0CJ88 424 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 DUX4L6P0CJ89 424 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 DUX4L7P0CJ90 424 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 CFPP27918 469 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 BDKRB2P30411 391 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 DNASE1L1P49184 302 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 RIDAP52758 137 aaKnown RBP10.23□□□□□ -0.77
SRP54-213ENST00000556994 SSBP1Q04837 148 aaKnown RBP10.23□□□□□ -0.77
SRP54-213ENST00000556994 SNTB1Q13884 538 aaKnown RBP10.23□□□□□ -0.77
SRP54-213ENST00000556994 OR7A5Q15622 319 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 FDX2Q6P4F2 183 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 PAPD4Q6PIY7 484 aaKnown RBP10.23□□□□□ -0.77
SRP54-213ENST00000556994 RTN4RL2Q86UN3 420 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 ZNF584Q8IVC4 421 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 CHST4Q8NCG5 386 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 OR4D6Q8NGJ1 314 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 GPBAR1Q8TDU6 330 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 PTPMT1Q8WUK0 201 aaPredicted RBP10.23□□□□□ -0.77
SRP54-213ENST00000556994 MRGPRFQ96AM1 343 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 C8orf44Q96CB5 159 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 ADAM19Q9H013 955 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 SLC39A1Q9NY26 324 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 DUX4Q9UBX2 424 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 PRODH2Q9UF12 536 aa10.23□□□□□ -0.77
SRP54-213ENST00000556994 PRUNE2Q8WUY3 3088 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 COL4A2P08572 1712 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 SULT1C2O00338 296 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 LINC01565O15544 149 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 OR2F2O95006 317 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 IL33O95760 270 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 AKR1C4P17516 323 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 VAMP1P23763 118 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 SLC37A1P57057 533 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 IL13RA1P78552 427 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 OR2F1Q13607 317 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 PAN3Q58A45 887 aaKnown RBP10.22□□□□□ -0.77
SRP54-213ENST00000556994 ACOT7LQ6ZUV0 252 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 ADGRE4PQ86SQ3 457 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 FJX1Q86VR8 437 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 CATSPERDQ86XM0 798 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 LINC00346Q8IVM7 164 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 ADAD2Q8NCV1 583 aaKnown RBP10.22□□□□□ -0.77
SRP54-213ENST00000556994 ASB12Q8WXK4 309 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 CCNL2Q96S94 520 aaPredicted RBP10.22□□□□□ -0.77
SRP54-213ENST00000556994 FAM117AQ9C073 453 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 DNTTIP1Q9H147 329 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 LHX6Q9UPM6 363 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 COA3Q9Y2R0 106 aaPredicted RBP10.22□□□□□ -0.77
SRP54-213ENST00000556994 C13orf42A0A1B0GVH6 325 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 FAM221BA6H8Z2 402 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 MPTX1A8MV57 137 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 DISC1C4P0D8 188 aa10.22□□□□□ -0.77
SRP54-213ENST00000556994 ATG12O94817 140 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms