RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 ZDHHC13Q8IUH4 622 aa9.2□□□□□ -0.94
LINC00239-201ENST00000556973 SVOPLQ8N434 492 aa9.2□□□□□ -0.94
LINC00239-201ENST00000556973 SLC26A10Q8NG04 563 aa9.2□□□□□ -0.94
LINC00239-201ENST00000556973 OR10H5Q8NGA6 315 aa9.2□□□□□ -0.94
LINC00239-201ENST00000556973 OR1J1Q8NGS3 322 aa9.2□□□□□ -0.94
LINC00239-201ENST00000556973 SYNPRQ8TBG9 265 aa9.2□□□□□ -0.94
LINC00239-201ENST00000556973 Q96MF0 132 aa9.2□□□□□ -0.94
LINC00239-201ENST00000556973 VRK1Q99986 396 aaPredicted RBP9.2□□□□□ -0.94
LINC00239-201ENST00000556973 RBM4Q9BWF3 364 aaKnown RBP9.2□□□□□ -0.94
LINC00239-201ENST00000556973 FN3KQ9H479 309 aa9.2□□□□□ -0.94
LINC00239-201ENST00000556973 CMC2Q9NRP2 79 aa9.2□□□□□ -0.94
LINC00239-201ENST00000556973 PLEK2Q9NYT0 353 aa9.2□□□□□ -0.94
LINC00239-201ENST00000556973 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.2□□□□□ -0.94
LINC00239-201ENST00000556973 DUSP13Q9UII6 198 aa9.2□□□□□ -0.94
LINC00239-201ENST00000556973 AKAP6Q13023 2319 aa9.2□□□□□ -0.94
LINC00239-201ENST00000556973 RIIAD1A6NNX1 92 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 SYNGR3O43761 229 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 DOK2O60496 412 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 TFP02787 698 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 HMGN1P05114 100 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 LCKP06239 509 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 ERCC1P07992 297 aaPredicted RBP9.19□□□□□ -0.94
LINC00239-201ENST00000556973 ZNF250P15622 560 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 ZNF823P16415 610 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 ZNF3P17036 446 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 TUBG1P23258 451 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 HTR5AP47898 357 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 DAPP51397 102 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 BLVRAP53004 296 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 SLC25A1P53007 311 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 NUDT6P53370 316 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 DSCR9P59020 149 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 HIST1H3AP68431 136 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 CRMP1Q14194 572 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 GINS1Q14691 196 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 MOGQ16653 247 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 MEP1BQ16820 701 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 ZNF718Q3SXZ3 478 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 CCDC92Q53HC0 331 aaPredicted RBP9.19□□□□□ -0.94
LINC00239-201ENST00000556973 HIST2H3PS2Q5TEC6 136 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 ACSM5Q6NUN0 579 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 FAHD1Q6P587 224 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 DNM1P46Q6ZS02 220 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 HIST2H3AQ71DI3 136 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 VASH1Q7L8A9 365 aaPredicted RBP9.19□□□□□ -0.94
LINC00239-201ENST00000556973 AMIGO2Q86SJ2 522 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 CYB561A3Q8NBI2 242 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 PROKR2Q8NFJ6 384 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 OR2AJ1Q8NGZ0 328 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 NEU4Q8WWR8 484 aaPredicted RBP9.19□□□□□ -0.94
LINC00239-201ENST00000556973 LRTOMTQ8WZ04 291 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 CENPNQ96H22 339 aaPredicted RBP9.19□□□□□ -0.94
LINC00239-201ENST00000556973 C18orf12Q96KH6 178 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 C4orf45Q96LM5 186 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 RAB3IPQ96QF0 476 aaPredicted RBP9.19□□□□□ -0.94
LINC00239-201ENST00000556973 TEX12Q9BXU0 123 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 MRPL37Q9BZE1 423 aaKnown RBP9.19□□□□□ -0.94
LINC00239-201ENST00000556973 NMNAT2Q9BZQ4 307 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 RAB1BQ9H0U4 201 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 MS4A5Q9H3V2 200 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 ELOVL3Q9HB03 270 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 TUBG2Q9NRH3 451 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 PAPOLBQ9NRJ5 636 aaKnown RBP9.19□□□□□ -0.94
LINC00239-201ENST00000556973 TBCCD1Q9NVR7 557 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 KIF17Q9P2E2 1029 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 ATPIF1Q9UII2 106 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 GPR160Q9UJ42 338 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 KCNG2Q9UJ96 466 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 POLR1DQ9Y2S0 133 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 LHFPL6Q9Y693 200 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 MYO9AB2RTY4 2548 aa9.19□□□□□ -0.94
LINC00239-201ENST00000556973 VPS13CQ709C8 3753 aa9.18□□□□□ -0.94
LINC00239-201ENST00000556973 RER1O15258 196 aa9.18□□□□□ -0.94
LINC00239-201ENST00000556973 ROS1P08922 2347 aa9.18□□□□□ -0.94
LINC00239-201ENST00000556973 ZNF23P17027 643 aa9.18□□□□□ -0.94
LINC00239-201ENST00000556973 SPI1P17947 270 aa9.18□□□□□ -0.94
LINC00239-201ENST00000556973 PAICSP22234 425 aaKnown RBP9.18□□□□□ -0.94
LINC00239-201ENST00000556973 FMO3P31513 532 aa9.18□□□□□ -0.94
LINC00239-201ENST00000556973 PYCR1P32322 319 aa9.18□□□□□ -0.94
LINC00239-201ENST00000556973 GGT2P36268 569 aa9.18□□□□□ -0.94
LINC00239-201ENST00000556973 WNT5AP41221 380 aa9.18□□□□□ -0.94
LINC00239-201ENST00000556973 CRISP1P54107 249 aa9.18□□□□□ -0.94
LINC00239-201ENST00000556973 ESRRGP62508 458 aa9.18□□□□□ -0.94
LINC00239-201ENST00000556973 KPNB1Q14974 876 aaKnown RBP9.18□□□□□ -0.94
LINC00239-201ENST00000556973 MSMPQ1L6U9 139 aa9.18□□□□□ -0.94
LINC00239-201ENST00000556973 ELFN2Q5R3F8 820 aa9.18□□□□□ -0.94
LINC00239-201ENST00000556973 OTPQ5XKR4 325 aa9.18□□□□□ -0.94
LINC00239-201ENST00000556973 SLC18B1Q6NT16 456 aa9.18□□□□□ -0.94
LINC00239-201ENST00000556973 ZFP1Q6P2D0 407 aa9.18□□□□□ -0.94
LINC00239-201ENST00000556973 CORO6Q6QEF8 472 aa9.18□□□□□ -0.94
LINC00239-201ENST00000556973 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.18□□□□□ -0.94
LINC00239-201ENST00000556973 ZNF101Q8IZC7 436 aa9.18□□□□□ -0.94
LINC00239-201ENST00000556973 PARP8Q8N3A8 854 aa9.18□□□□□ -0.94
LINC00239-201ENST00000556973 IQCF1Q8N6M8 205 aa9.18□□□□□ -0.94
LINC00239-201ENST00000556973 OR1F12Q8NHA8 337 aa9.18□□□□□ -0.94
LINC00239-201ENST00000556973 ZNRF4Q8WWF5 429 aa9.18□□□□□ -0.94
LINC00239-201ENST00000556973 IPCEF1Q8WWN9 437 aaPredicted RBP9.18□□□□□ -0.94
LINC00239-201ENST00000556973 PTP4A1Q93096 173 aa9.18□□□□□ -0.94
LINC00239-201ENST00000556973 DCLRE1CQ96SD1 692 aaKnown RBP9.18□□□□□ -0.94
LINC00239-201ENST00000556973 SYT3Q9BQG1 590 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms