RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 SYNGR3O43761 229 aa19.64■□□□□ 0.73
TDP1-216ENST00000556867 DOK2O60496 412 aa19.64■□□□□ 0.73
TDP1-216ENST00000556867 TIPRLO75663 272 aa19.64■□□□□ 0.73
TDP1-216ENST00000556867 ZNF250P15622 560 aa19.64■□□□□ 0.73
TDP1-216ENST00000556867 DSCR9P59020 149 aa19.64■□□□□ 0.73
TDP1-216ENST00000556867 SLC36A3Q495N2 470 aa19.64■□□□□ 0.73
TDP1-216ENST00000556867 CLEC2AQ6UVW9 174 aa19.64■□□□□ 0.73
TDP1-216ENST00000556867 VASH1Q7L8A9 365 aaPredicted RBP19.64■□□□□ 0.73
TDP1-216ENST00000556867 BIVMQ86UB2 503 aa19.64■□□□□ 0.73
TDP1-216ENST00000556867 ZNF101Q8IZC7 436 aa19.64■□□□□ 0.73
TDP1-216ENST00000556867 HS3ST5Q8IZT8 346 aa19.64■□□□□ 0.73
TDP1-216ENST00000556867 SLC37A3Q8NCC5 494 aa19.64■□□□□ 0.73
TDP1-216ENST00000556867 TEX47Q8TBZ9 253 aa19.64■□□□□ 0.73
TDP1-216ENST00000556867 UTP4Q969X6 686 aaKnown RBP19.64■□□□□ 0.73
TDP1-216ENST00000556867 NRBF2Q96F24 287 aa19.64■□□□□ 0.73
TDP1-216ENST00000556867 DUS3LQ96G46 650 aaKnown RBP19.64■□□□□ 0.73
TDP1-216ENST00000556867 RAB1BQ9H0U4 201 aa19.64■□□□□ 0.73
TDP1-216ENST00000556867 NTN4Q9HB63 628 aa19.64■□□□□ 0.73
TDP1-216ENST00000556867 EIF3KQ9UBQ5 218 aaKnown RBP19.64■□□□□ 0.73
TDP1-216ENST00000556867 KLHL21Q9UJP4 597 aa19.64■□□□□ 0.73
TDP1-216ENST00000556867 FZR1Q9UM11 496 aa19.64■□□□□ 0.73
TDP1-216ENST00000556867 POLR1DQ9Y2S0 133 aa19.64■□□□□ 0.73
TDP1-216ENST00000556867 ZANQ9Y493 2812 aa19.63■□□□□ 0.73
TDP1-216ENST00000556867 M0R233 179 aa19.63■□□□□ 0.73
TDP1-216ENST00000556867 LCKP06239 509 aa19.63■□□□□ 0.73
TDP1-216ENST00000556867 CSF3P09919 207 aa19.63■□□□□ 0.73
TDP1-216ENST00000556867 ANXA8P13928 327 aa19.63■□□□□ 0.73
TDP1-216ENST00000556867 HTR5AP47898 357 aa19.63■□□□□ 0.73
TDP1-216ENST00000556867 ERVS71-1P61550 626 aa19.63■□□□□ 0.73
TDP1-216ENST00000556867 DBPQ10586 325 aaPredicted RBP19.63■□□□□ 0.73
TDP1-216ENST00000556867 CCNIQ14094 377 aa19.63■□□□□ 0.73
TDP1-216ENST00000556867 MEP1BQ16820 701 aa19.63■□□□□ 0.73
TDP1-216ENST00000556867 SHQ1Q6PI26 577 aaKnown RBP19.63■□□□□ 0.73
TDP1-216ENST00000556867 UNQ6126/PRO20091Q6UXV3 157 aa19.63■□□□□ 0.73
TDP1-216ENST00000556867 LRP11Q86VZ4 500 aa19.63■□□□□ 0.73
TDP1-216ENST00000556867 ZNF525Q8N782 197 aa19.63■□□□□ 0.73
TDP1-216ENST00000556867 CYB561A3Q8NBI2 242 aa19.63■□□□□ 0.73
TDP1-216ENST00000556867 OR10H5Q8NGA6 315 aa19.63■□□□□ 0.73
TDP1-216ENST00000556867 OR2T4Q8NH00 348 aa19.63■□□□□ 0.73
TDP1-216ENST00000556867 PLEK2Q9NYT0 353 aa19.63■□□□□ 0.73
TDP1-216ENST00000556867 MYEF2Q9P2K5 600 aaKnown RBP19.63■□□□□ 0.73
TDP1-216ENST00000556867 ATPIF1Q9UII2 106 aa19.63■□□□□ 0.73
TDP1-216ENST00000556867 LHFPL6Q9Y693 200 aa19.63■□□□□ 0.73
TDP1-216ENST00000556867 TLN2Q9Y4G6 2542 aa19.62■□□□□ 0.73
TDP1-216ENST00000556867 CSPG4Q6UVK1 2322 aa19.62■□□□□ 0.73
TDP1-216ENST00000556867 IGLV3-9A0A075B6K5 115 aa19.62■□□□□ 0.73
TDP1-216ENST00000556867 OR6C6A6NF89 314 aa19.62■□□□□ 0.73
TDP1-216ENST00000556867 CIB2O75838 187 aa19.62■□□□□ 0.73
TDP1-216ENST00000556867 LY6HO94772 140 aa19.62■□□□□ 0.73
TDP1-216ENST00000556867 TFP02787 698 aa19.62■□□□□ 0.73
TDP1-216ENST00000556867 ARHGDIAP52565 204 aa19.62■□□□□ 0.73
TDP1-216ENST00000556867 HIST1H3AP68431 136 aa19.62■□□□□ 0.73
TDP1-216ENST00000556867 CRMP1Q14194 572 aa19.62■□□□□ 0.73
TDP1-216ENST00000556867 CCDC92Q53HC0 331 aaPredicted RBP19.62■□□□□ 0.73
TDP1-216ENST00000556867 HIST2H3PS2Q5TEC6 136 aa19.62■□□□□ 0.73
TDP1-216ENST00000556867 HIST2H3AQ71DI3 136 aa19.62■□□□□ 0.73
TDP1-216ENST00000556867 C1orf174Q8IYL3 243 aa19.62■□□□□ 0.73
TDP1-216ENST00000556867 OR1J1Q8NGS3 322 aa19.62■□□□□ 0.73
TDP1-216ENST00000556867 RHNO1Q9BSD3 238 aa19.62■□□□□ 0.73
TDP1-216ENST00000556867 RBM4Q9BWF3 364 aaKnown RBP19.62■□□□□ 0.73
TDP1-216ENST00000556867 ZNF556Q9HAH1 456 aa19.62■□□□□ 0.73
TDP1-216ENST00000556867 DUSP13Q9UII6 198 aa19.62■□□□□ 0.73
TDP1-216ENST00000556867 CR1P17927 2039 aa19.61■□□□□ 0.73
TDP1-216ENST00000556867 FAM171A2A8MVW0 826 aa19.61■□□□□ 0.73
TDP1-216ENST00000556867 H3BN98 237 aa19.61■□□□□ 0.73
TDP1-216ENST00000556867 SMAD7O15105 426 aaKnown RBP19.61■□□□□ 0.73
TDP1-216ENST00000556867 IFNGP01579 166 aa19.61■□□□□ 0.73
TDP1-216ENST00000556867 ERCC1P07992 297 aaPredicted RBP19.61■□□□□ 0.73
TDP1-216ENST00000556867 ADRA2AP08913 450 aa19.61■□□□□ 0.73
TDP1-216ENST00000556867 PRKACGP22612 351 aa19.61■□□□□ 0.73
TDP1-216ENST00000556867 GRK5P34947 590 aa19.61■□□□□ 0.73
TDP1-216ENST00000556867 KLF3P57682 345 aaPredicted RBP19.61■□□□□ 0.73
TDP1-216ENST00000556867 SELENOVP59797 346 aa19.61■□□□□ 0.73
TDP1-216ENST00000556867 TEKQ02763 1124 aa19.61■□□□□ 0.73
TDP1-216ENST00000556867 ATP6AP1Q15904 470 aa19.61■□□□□ 0.73
TDP1-216ENST00000556867 RFPL4BQ6ZWI9 263 aa19.61■□□□□ 0.73
TDP1-216ENST00000556867 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.61■□□□□ 0.73
TDP1-216ENST00000556867 ICA1LQ8NDH6 482 aa19.61■□□□□ 0.73
TDP1-216ENST00000556867 GJC3Q8NFK1 279 aa19.61■□□□□ 0.73
TDP1-216ENST00000556867 SYNPRQ8TBG9 265 aa19.61■□□□□ 0.73
TDP1-216ENST00000556867 NEU4Q8WWR8 484 aaPredicted RBP19.61■□□□□ 0.73
TDP1-216ENST00000556867 C4orf45Q96LM5 186 aa19.61■□□□□ 0.73
TDP1-216ENST00000556867 REG4Q9BYZ8 158 aa19.61■□□□□ 0.73
TDP1-216ENST00000556867 NMNAT2Q9BZQ4 307 aa19.61■□□□□ 0.73
TDP1-216ENST00000556867 GSX1Q9H4S2 264 aaPredicted RBP19.61■□□□□ 0.73
TDP1-216ENST00000556867 ELOVL3Q9HB03 270 aa19.61■□□□□ 0.73
TDP1-216ENST00000556867 MYOZ1Q9NP98 299 aaPredicted RBP19.61■□□□□ 0.73
TDP1-216ENST00000556867 CMC2Q9NRP2 79 aa19.61■□□□□ 0.73
TDP1-216ENST00000556867 IGHV4-30-2A0A087WSY4 118 aa19.6■□□□□ 0.73
TDP1-216ENST00000556867 A0A1W2PPW3 197 aa19.6■□□□□ 0.73
TDP1-216ENST00000556867 RIIAD1A6NNX1 92 aa19.6■□□□□ 0.73
TDP1-216ENST00000556867 RNF223E7ERA6 249 aa19.6■□□□□ 0.73
TDP1-216ENST00000556867 RER1O15258 196 aa19.6■□□□□ 0.73
TDP1-216ENST00000556867 OSMP13725 252 aa19.6■□□□□ 0.73
TDP1-216ENST00000556867 PYCR1P32322 319 aa19.6■□□□□ 0.73
TDP1-216ENST00000556867 ALDH3B1P43353 468 aa19.6■□□□□ 0.73
TDP1-216ENST00000556867 SLC25A1P53007 311 aa19.6■□□□□ 0.73
TDP1-216ENST00000556867 ARL9Q6T311 187 aa19.6■□□□□ 0.73
TDP1-216ENST00000556867 ZCCHC24Q8N2G6 241 aaKnown RBP19.6■□□□□ 0.73
TDP1-216ENST00000556867 IQCF1Q8N6M8 205 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms