RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 CDH20Q9HBT6 801 aa15.13■□□□□ 0.01
SHMT2-225ENST00000556798 COMMD3-BMI1R4GMX3 469 aa15.13■□□□□ 0.01
SHMT2-225ENST00000556798 RER1O15258 196 aa15.12■□□□□ 0.01
SHMT2-225ENST00000556798 SGCEO43556 437 aa15.12■□□□□ 0.01
SHMT2-225ENST00000556798 SOD3P08294 240 aa15.12■□□□□ 0.01
SHMT2-225ENST00000556798 ZNF823P16415 610 aa15.12■□□□□ 0.01
SHMT2-225ENST00000556798 CCNOP22674 350 aa15.12■□□□□ 0.01
SHMT2-225ENST00000556798 FMO3P31513 532 aa15.12■□□□□ 0.01
SHMT2-225ENST00000556798 GGT2P36268 569 aa15.12■□□□□ 0.01
SHMT2-225ENST00000556798 RAD23AP54725 363 aa15.12■□□□□ 0.01
SHMT2-225ENST00000556798 ADAM8P78325 824 aa15.12■□□□□ 0.01
SHMT2-225ENST00000556798 SNTB2Q13425 540 aaKnown RBP15.12■□□□□ 0.01
SHMT2-225ENST00000556798 LRRC36Q1X8D7 754 aa15.12■□□□□ 0.01
SHMT2-225ENST00000556798 KLHL12Q53G59 568 aa15.12■□□□□ 0.01
SHMT2-225ENST00000556798 LPCAT4Q643R3 524 aa15.12■□□□□ 0.01
SHMT2-225ENST00000556798 VASH1Q7L8A9 365 aaPredicted RBP15.12■□□□□ 0.01
SHMT2-225ENST00000556798 ALDH16A1Q8IZ83 802 aa15.12■□□□□ 0.01
SHMT2-225ENST00000556798 TCEANCQ8N8B7 351 aa15.12■□□□□ 0.01
SHMT2-225ENST00000556798 SMAP2Q8WU79 429 aaPredicted RBP15.12■□□□□ 0.01
SHMT2-225ENST00000556798 MBOAT4Q96T53 435 aa15.12■□□□□ 0.01
SHMT2-225ENST00000556798 CCL19Q99731 98 aa15.12■□□□□ 0.01
SHMT2-225ENST00000556798 DHRS9Q9BPW9 319 aa15.12■□□□□ 0.01
SHMT2-225ENST00000556798 PRRG3Q9BZD7 231 aa15.12■□□□□ 0.01
SHMT2-225ENST00000556798 GRIP2Q9C0E4 1043 aa15.12■□□□□ 0.01
SHMT2-225ENST00000556798 C1orf198Q9H425 327 aa15.12■□□□□ 0.01
SHMT2-225ENST00000556798 CA10Q9NS85 328 aa15.12■□□□□ 0.01
SHMT2-225ENST00000556798 PLEK2Q9NYT0 353 aa15.12■□□□□ 0.01
SHMT2-225ENST00000556798 LAMP3Q9UQV4 416 aa15.12■□□□□ 0.01
SHMT2-225ENST00000556798 ARFGEF3Q5TH69 2177 aa15.11■□□□□ 0.01
SHMT2-225ENST00000556798 LOC100509620A0A075B734 347 aa15.11■□□□□ 0.01
SHMT2-225ENST00000556798 C5orf49A4QMS7 147 aa15.11■□□□□ 0.01
SHMT2-225ENST00000556798 GPRIN2O60269 458 aa15.11■□□□□ 0.01
SHMT2-225ENST00000556798 GLCEO94923 617 aa15.11■□□□□ 0.01
SHMT2-225ENST00000556798 PTHP01270 115 aa15.11■□□□□ 0.01
SHMT2-225ENST00000556798 SPARCP09486 303 aa15.11■□□□□ 0.01
SHMT2-225ENST00000556798 DANCRP0C864 163 aa15.11■□□□□ 0.01
SHMT2-225ENST00000556798 FAM157BP0CG42 384 aa15.11■□□□□ 0.01
SHMT2-225ENST00000556798 CD53P19397 219 aa15.11■□□□□ 0.01
SHMT2-225ENST00000556798 DNASE1P24855 282 aa15.11■□□□□ 0.01
SHMT2-225ENST00000556798 PEX2P28328 305 aa15.11■□□□□ 0.01
SHMT2-225ENST00000556798 HTR5AP47898 357 aa15.11■□□□□ 0.01
SHMT2-225ENST00000556798 GDI2P50395 445 aaKnown RBP15.11■□□□□ 0.01
SHMT2-225ENST00000556798 FABP6P51161 128 aa15.11■□□□□ 0.01
SHMT2-225ENST00000556798 GALK2Q01415 458 aa15.11■□□□□ 0.01
SHMT2-225ENST00000556798 CCDC92Q53HC0 331 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-225ENST00000556798 SLC18B1Q6NT16 456 aa15.11■□□□□ 0.01
SHMT2-225ENST00000556798 TMEM154Q6P9G4 183 aa15.11■□□□□ 0.01
SHMT2-225ENST00000556798 CFAP77Q6ZQR2 320 aa15.11■□□□□ 0.01
SHMT2-225ENST00000556798 ZNF771Q7L3S4 317 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-225ENST00000556798 BCDIN3DQ7Z5W3 292 aaKnown RBP15.11■□□□□ 0.01
SHMT2-225ENST00000556798 NUP37Q8NFH4 326 aa15.11■□□□□ 0.01
SHMT2-225ENST00000556798 OR4F15Q8NGB8 312 aa15.11■□□□□ 0.01
SHMT2-225ENST00000556798 OR1J2Q8NGS2 313 aa15.11■□□□□ 0.01
SHMT2-225ENST00000556798 ZMYND19Q96E35 227 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-225ENST00000556798 POM121L2Q96KW2 1035 aa15.11■□□□□ 0.01
SHMT2-225ENST00000556798 IL4I1Q96RQ9 567 aa15.11■□□□□ 0.01
SHMT2-225ENST00000556798 WACQ9BTA9 647 aa15.11■□□□□ 0.01
SHMT2-225ENST00000556798 CDADC1Q9BWV3 514 aa15.11■□□□□ 0.01
SHMT2-225ENST00000556798 TOR3AQ9H497 397 aa15.11■□□□□ 0.01
SHMT2-225ENST00000556798 GDF2Q9UK05 429 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-225ENST00000556798 CCDC168Q8NDH2 2452 aa15.11■□□□□ 0.01
SHMT2-225ENST00000556798 TLX2O43763 284 aaPredicted RBP15.1■□□□□ 0.01
SHMT2-225ENST00000556798 SNAP29O95721 258 aa15.1■□□□□ 0.01
SHMT2-225ENST00000556798 SLC2A5P22732 501 aa15.1■□□□□ 0.01
SHMT2-225ENST00000556798 NR4A1P22736 598 aa15.1■□□□□ 0.01
SHMT2-225ENST00000556798 TTKP33981 857 aa15.1■□□□□ 0.01
SHMT2-225ENST00000556798 THBS4P35443 961 aa15.1■□□□□ 0.01
SHMT2-225ENST00000556798 ENTPD1P49961 510 aa15.1■□□□□ 0.01
SHMT2-225ENST00000556798 RPS7P62081 194 aaKnown RBP15.1■□□□□ 0.01
SHMT2-225ENST00000556798 NKX6-1P78426 367 aaPredicted RBP15.1■□□□□ 0.01
SHMT2-225ENST00000556798 APOFQ13790 326 aa15.1■□□□□ 0.01
SHMT2-225ENST00000556798 RAB35Q15286 201 aa15.1■□□□□ 0.01
SHMT2-225ENST00000556798 ERI1Q8IV48 349 aaKnown RBP15.1■□□□□ 0.01
SHMT2-225ENST00000556798 GJC3Q8NFK1 279 aa15.1■□□□□ 0.01
SHMT2-225ENST00000556798 OR2AJ1Q8NGZ0 328 aa15.1■□□□□ 0.01
SHMT2-225ENST00000556798 SLC7A6Q92536 515 aa15.1■□□□□ 0.01
SHMT2-225ENST00000556798 CYB5R1Q9UHQ9 305 aa15.1■□□□□ 0.01
SHMT2-225ENST00000556798 USF3Q68DE3 2245 aa15.1■□□□□ 0.01
SHMT2-225ENST00000556798 MAST4O15021 2626 aa15.09■□□□□ 0.01
SHMT2-225ENST00000556798 PRODHO43272 600 aa15.09■□□□□ 0.01
SHMT2-225ENST00000556798 SYNGR3O43761 229 aa15.09■□□□□ 0.01
SHMT2-225ENST00000556798 GSTT1P30711 240 aa15.09■□□□□ 0.01
SHMT2-225ENST00000556798 WNT5AP41221 380 aa15.09■□□□□ 0.01
SHMT2-225ENST00000556798 BLVRAP53004 296 aa15.09■□□□□ 0.01
SHMT2-225ENST00000556798 HIST1H3AP68431 136 aa15.09■□□□□ 0.01
SHMT2-225ENST00000556798 ELFN2Q5R3F8 820 aa15.09■□□□□ 0.01
SHMT2-225ENST00000556798 HIST2H3PS2Q5TEC6 136 aa15.09■□□□□ 0.01
SHMT2-225ENST00000556798 ZNF544Q6NX49 715 aa15.09■□□□□ 0.01
SHMT2-225ENST00000556798 HIST2H3AQ71DI3 136 aa15.09■□□□□ 0.01
SHMT2-225ENST00000556798 FBXL14Q8N1E6 418 aa15.09■□□□□ 0.01
SHMT2-225ENST00000556798 MUC15Q8N387 334 aa15.09■□□□□ 0.01
SHMT2-225ENST00000556798 GALNT4Q8N4A0 578 aa15.09■□□□□ 0.01
SHMT2-225ENST00000556798 OR6N2Q8NGY6 317 aa15.09■□□□□ 0.01
SHMT2-225ENST00000556798 OR1F12Q8NHA8 337 aa15.09■□□□□ 0.01
SHMT2-225ENST00000556798 FAM81AQ8TBF8 368 aa15.09■□□□□ 0.01
SHMT2-225ENST00000556798 TMEM163Q8TC26 289 aa15.09■□□□□ 0.01
SHMT2-225ENST00000556798 MAP6Q96JE9 813 aa15.09■□□□□ 0.01
SHMT2-225ENST00000556798 INTS14Q96SY0 518 aa15.09■□□□□ 0.01
SHMT2-225ENST00000556798 FAIMQ9NVQ4 179 aa15.09■□□□□ 0.01
SHMT2-225ENST00000556798 NKX1-2Q9UD57 310 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms