RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 MXRA5Q9NR99 2828 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 RAI1Q7Z5J4 1906 aaPredicted RBP6.29□□□□□ -1.4
SCFD1-222ENST00000556768 FBN1P35555 2871 aaKnown RBP6.29□□□□□ -1.4
SCFD1-222ENST00000556768 ABCA1O95477 2261 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 VWC2LB2RUY7 222 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 FFAR1O14842 300 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 PIP5K1CO60331 668 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 NDUFB2O95178 105 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 IGHMP01871 453 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 CST2P09228 141 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 FAM157CP0CG43 387 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 IGHV4-31P0DP07 118 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 ZNF250P15622 560 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 ZNF32P17041 273 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 MAKP20794 623 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 MSR1P21757 451 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 ACHEP22303 614 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 APEX1P27695 318 aaKnown RBP6.29□□□□□ -1.4
SCFD1-222ENST00000556768 LAP3P28838 519 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 LIPAP38571 399 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 GPR4P46093 362 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 RPS6KA3P51812 740 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 ERVK-25P63136 954 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 GNGT1P63211 74 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 MRPS11P82912 194 aaKnown RBP6.29□□□□□ -1.4
SCFD1-222ENST00000556768 PDCD1Q15116 288 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 SPATS1Q496A3 300 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 GPR139Q6DWJ6 353 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 C8orf82Q6P1X6 216 aaPredicted RBP6.29□□□□□ -1.4
SCFD1-222ENST00000556768 TBPL2Q6SJ96 375 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 ZER1Q7Z7L7 766 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 IGFN1Q86VF2 1251 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 PRIMA1Q86XR5 153 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 RNF148Q8N7C7 305 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 OR1J1Q8NGS3 322 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 OR13C2Q8NGS9 318 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 OR52J3Q8NH60 311 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 FGFBP3Q8TAT2 258 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 PYURFQ96I23 114 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 ZNF570Q96NI8 536 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 ZNF416Q9BWM5 594 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 MYLK2Q9H1R3 596 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 RERGLQ9H628 205 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 SMURF1Q9HCE7 757 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 HINT3Q9NQE9 182 aaKnown RBP6.29□□□□□ -1.4
SCFD1-222ENST00000556768 CYSLTR2Q9NS75 346 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 MAN2C1Q9NTJ4 1040 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 NDUFAF4Q9P032 175 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 FBXL7Q9UJT9 491 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 NDRG4Q9ULP0 352 aaKnown RBP6.29□□□□□ -1.4
SCFD1-222ENST00000556768 TMCC3Q9ULS5 477 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 A0A096LNT2 108 aa6.28□□□□□ -1.4
SCFD1-222ENST00000556768 IGHV4-61A0A0C4DH41 118 aa6.28□□□□□ -1.4
SCFD1-222ENST00000556768 PRSS37A4D1T9 235 aa6.28□□□□□ -1.4
SCFD1-222ENST00000556768 ZNF205O95201 554 aa6.28□□□□□ -1.4
SCFD1-222ENST00000556768 GADD45GO95257 159 aa6.28□□□□□ -1.4
SCFD1-222ENST00000556768 MMP7P09237 267 aaPredicted RBP6.28□□□□□ -1.4
SCFD1-222ENST00000556768 ANPEPP15144 967 aa6.28□□□□□ -1.4
SCFD1-222ENST00000556768 SRD5A1P18405 259 aa6.28□□□□□ -1.4
SCFD1-222ENST00000556768 TUBG1P23258 451 aa6.28□□□□□ -1.4
SCFD1-222ENST00000556768 NOS3P29474 1203 aa6.28□□□□□ -1.4
SCFD1-222ENST00000556768 SDHAP31040 664 aa6.28□□□□□ -1.4
SCFD1-222ENST00000556768 GPR6P46095 362 aaPredicted RBP6.28□□□□□ -1.4
SCFD1-222ENST00000556768 PSG4Q00888 419 aa6.28□□□□□ -1.4
SCFD1-222ENST00000556768 FMODQ06828 376 aa6.28□□□□□ -1.4
SCFD1-222ENST00000556768 SCRN3Q0VDG4 424 aa6.28□□□□□ -1.4
SCFD1-222ENST00000556768 ZMAT1Q5H9K5 638 aa6.28□□□□□ -1.4
SCFD1-222ENST00000556768 SLC25A47Q6Q0C1 308 aa6.28□□□□□ -1.4
SCFD1-222ENST00000556768 DPY19L2P2Q6ZN68 376 aa6.28□□□□□ -1.4
SCFD1-222ENST00000556768 ADCK1Q86TW2 530 aa6.28□□□□□ -1.4
SCFD1-222ENST00000556768 LRP11Q86VZ4 500 aa6.28□□□□□ -1.4
SCFD1-222ENST00000556768 PGAM4Q8N0Y7 254 aa6.28□□□□□ -1.4
SCFD1-222ENST00000556768 LINC01356Q8N9X3 169 aa6.28□□□□□ -1.4
SCFD1-222ENST00000556768 FAM156AQ8NDB6 213 aa6.28□□□□□ -1.4
SCFD1-222ENST00000556768 MSI2Q96DH6 328 aaKnown RBP6.28□□□□□ -1.4
SCFD1-222ENST00000556768 TIMD4Q96H15 378 aa6.28□□□□□ -1.4
SCFD1-222ENST00000556768 FAM46AQ96IP4 442 aaKnown RBP6.28□□□□□ -1.4
SCFD1-222ENST00000556768 NSMCE2Q96MF7 247 aa6.28□□□□□ -1.4
SCFD1-222ENST00000556768 COG8Q96MW5 612 aa6.28□□□□□ -1.4
SCFD1-222ENST00000556768 TSPAN32Q96QS1 320 aa6.28□□□□□ -1.4
SCFD1-222ENST00000556768 SNX18Q96RF0 628 aa6.28□□□□□ -1.4
SCFD1-222ENST00000556768 CDRT15Q96T59 188 aa6.28□□□□□ -1.4
SCFD1-222ENST00000556768 EGLN1Q9GZT9 426 aa6.28□□□□□ -1.4
SCFD1-222ENST00000556768 TUBG2Q9NRH3 451 aa6.28□□□□□ -1.4
SCFD1-222ENST00000556768 HEATR1Q9H583 2144 aaKnown RBP6.28□□□□□ -1.4
SCFD1-222ENST00000556768 LRP5LA4QPB2 252 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 C17orf100A8MU93 164 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 KIAA1324LA8MWY0 1029 aaPredicted RBP6.27□□□□□ -1.41
SCFD1-222ENST00000556768 B4DSR2 109 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 CDC42EP2O14613 210 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 PPIHO43447 177 aaKnown RBP6.27□□□□□ -1.41
SCFD1-222ENST00000556768 OR10H3O60404 316 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 KRT36O76013 467 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 PRSS23O95084 383 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 IGHV3-13P01766 116 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 FABP3P05413 133 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 TACSTD2P09758 323 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 HSD17B1P14061 328 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 GSTM3P21266 225 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 CRABP1P29762 137 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms