RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 CGREF1Q99674 301 aa9.98□□□□□ -0.81
ACTN1-221ENST00000556571 SH3GL1Q99961 368 aa9.98□□□□□ -0.81
ACTN1-221ENST00000556571 WNT5BQ9H1J7 359 aa9.98□□□□□ -0.81
ACTN1-221ENST00000556571 MMP27Q9H306 513 aa9.98□□□□□ -0.81
ACTN1-221ENST00000556571 PRDM13Q9H4Q3 707 aa9.98□□□□□ -0.81
ACTN1-221ENST00000556571 IKZF5Q9H5V7 419 aa9.98□□□□□ -0.81
ACTN1-221ENST00000556571 SAR1AQ9NR31 198 aa9.98□□□□□ -0.81
ACTN1-221ENST00000556571 TUBG2Q9NRH3 451 aa9.98□□□□□ -0.81
ACTN1-221ENST00000556571 MAN2C1Q9NTJ4 1040 aa9.98□□□□□ -0.81
ACTN1-221ENST00000556571 PDP1Q9P0J1 537 aaPredicted RBP9.98□□□□□ -0.81
ACTN1-221ENST00000556571 IL19Q9UHD0 177 aa9.98□□□□□ -0.81
ACTN1-221ENST00000556571 PPP1R3CQ9UQK1 317 aa9.98□□□□□ -0.81
ACTN1-221ENST00000556571 TIMM10BQ9Y5J6 103 aa9.98□□□□□ -0.81
ACTN1-221ENST00000556571 SOX21Q9Y651 276 aaPredicted RBP9.98□□□□□ -0.81
ACTN1-221ENST00000556571 FAM181BA6NEQ2 426 aa9.97□□□□□ -0.81
ACTN1-221ENST00000556571 IFNL4K9M1U5 179 aa9.97□□□□□ -0.81
ACTN1-221ENST00000556571 MRASO14807 208 aa9.97□□□□□ -0.81
ACTN1-221ENST00000556571 TIMM23O14925 209 aa9.97□□□□□ -0.81
ACTN1-221ENST00000556571 SLC22A2O15244 555 aa9.97□□□□□ -0.81
ACTN1-221ENST00000556571 HOXA3O43365 443 aaPredicted RBP9.97□□□□□ -0.81
ACTN1-221ENST00000556571 CST2P09228 141 aa9.97□□□□□ -0.81
ACTN1-221ENST00000556571 WNT2P09544 360 aa9.97□□□□□ -0.81
ACTN1-221ENST00000556571 FUT1P19526 365 aa9.97□□□□□ -0.81
ACTN1-221ENST00000556571 GSTM3P21266 225 aa9.97□□□□□ -0.81
ACTN1-221ENST00000556571 GUCA1AP43080 201 aaPredicted RBP9.97□□□□□ -0.81
ACTN1-221ENST00000556571 RAG2P55895 527 aa9.97□□□□□ -0.81
ACTN1-221ENST00000556571 MTPNP58546 118 aa9.97□□□□□ -0.81
ACTN1-221ENST00000556571 PCBD1P61457 104 aa9.97□□□□□ -0.81
ACTN1-221ENST00000556571 PAX2Q02962 417 aa9.97□□□□□ -0.81
ACTN1-221ENST00000556571 SRSF4Q08170 494 aaKnown RBP9.97□□□□□ -0.81
ACTN1-221ENST00000556571 KLF10Q13118 480 aa9.97□□□□□ -0.81
ACTN1-221ENST00000556571 RUNDC3AQ59EK9 446 aa9.97□□□□□ -0.81
ACTN1-221ENST00000556571 COQ5Q5HYK3 327 aa9.97□□□□□ -0.81
ACTN1-221ENST00000556571 ARMC4Q5T2S8 1044 aa9.97□□□□□ -0.81
ACTN1-221ENST00000556571 FAM205BPQ63HN1 556 aa9.97□□□□□ -0.81
ACTN1-221ENST00000556571 OLFML2AQ68BL7 652 aa9.97□□□□□ -0.81
ACTN1-221ENST00000556571 JAZF1Q86VZ6 243 aa9.97□□□□□ -0.81
ACTN1-221ENST00000556571 RBM45Q8IUH3 476 aaKnown RBP9.97□□□□□ -0.81
ACTN1-221ENST00000556571 KIR3DL3Q8N743 410 aa9.97□□□□□ -0.81
ACTN1-221ENST00000556571 C11orf65Q8NCR3 313 aa9.97□□□□□ -0.81
ACTN1-221ENST00000556571 OR2Z1Q8NG97 314 aa9.97□□□□□ -0.81
ACTN1-221ENST00000556571 GPR32P1Q8NGA4 272 aa9.97□□□□□ -0.81
ACTN1-221ENST00000556571 VANGL1Q8TAA9 524 aaPredicted RBP9.97□□□□□ -0.81
ACTN1-221ENST00000556571 RAB40AQ8WXH6 277 aa9.97□□□□□ -0.81
ACTN1-221ENST00000556571 NSMAFQ92636 917 aa9.97□□□□□ -0.81
ACTN1-221ENST00000556571 ZDHHC16Q969W1 377 aa9.97□□□□□ -0.81
ACTN1-221ENST00000556571 SIGLEC11Q96RL6 698 aa9.97□□□□□ -0.81
ACTN1-221ENST00000556571 CITED1Q99966 193 aa9.97□□□□□ -0.81
ACTN1-221ENST00000556571 CPPED1Q9BRF8 314 aaPredicted RBP9.97□□□□□ -0.81
ACTN1-221ENST00000556571 SSBP3Q9BWW4 388 aaPredicted RBP9.97□□□□□ -0.81
ACTN1-221ENST00000556571 PCDHAC1Q9H158 963 aa9.97□□□□□ -0.81
ACTN1-221ENST00000556571 MEPEQ9NQ76 525 aaPredicted RBP9.97□□□□□ -0.81
ACTN1-221ENST00000556571 GID8Q9NWU2 228 aa9.97□□□□□ -0.81
ACTN1-221ENST00000556571 IGKV1D-43A0A0B4J1Z2 117 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 TRAV40A0A0B4J280 105 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 IGHV2-70DA0A0C4DH43 119 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 LOC100653049A0A140TA62 436 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 NPIPB13A6NJU9 1138 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 CEACAM18A8MTB9 384 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 SRRM5B3KS81 715 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 NPIPB4C9JG80 1138 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 TMEM178BH3BS89 294 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 KRT34O76011 436 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 OR7A10O76100 309 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 NPPAP01160 153 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 MT-ND1P03886 318 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 OPN1SWP03999 348 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 CD247P20963 164 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 KITLGP21583 273 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 LAP3P28838 519 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 RBMXP38159 391 aaKnown RBP9.96□□□□□ -0.82
ACTN1-221ENST00000556571 AQP2P41181 271 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 BPIFB3P59826 476 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 FMODQ06828 376 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 CD47Q08722 323 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 ZNF774Q6NX45 483 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 BRICD5Q6PL45 260 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 SLC25A47Q6Q0C1 308 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 TSPYL5Q86VY4 417 aaPredicted RBP9.96□□□□□ -0.82
ACTN1-221ENST00000556571 PTOV1Q86YD1 416 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 SLC30A8Q8IWU4 369 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 NPEPL1Q8NDH3 523 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 OR4D11Q8NGI4 311 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 FNDC8Q8TC99 324 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 C10orf82Q8WW14 230 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 ITLN1Q8WWA0 313 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 HDAC2Q92769 488 aaKnown RBP9.96□□□□□ -0.82
ACTN1-221ENST00000556571 PLEKHA8Q96JA3 519 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 RBP7Q96R05 134 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 PKP2Q99959 881 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 ELAC2Q9BQ52 826 aaKnown RBP9.96□□□□□ -0.82
ACTN1-221ENST00000556571 PRSS27Q9BQR3 290 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 NOX4Q9NPH5 578 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 TBCCD1Q9NVR7 557 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 NDRG4Q9ULP0 352 aaKnown RBP9.96□□□□□ -0.82
ACTN1-221ENST00000556571 ZNF281Q9Y2X9 895 aa9.96□□□□□ -0.82
ACTN1-221ENST00000556571 TANC2Q9HCD6 1990 aa9.95□□□□□ -0.82
ACTN1-221ENST00000556571 KIR2DS1A0A191URI9 304 aa9.95□□□□□ -0.82
ACTN1-221ENST00000556571 MDFIC2A0A1B0GVS7 189 aa9.95□□□□□ -0.82
ACTN1-221ENST00000556571 CLPSL1A2RUU4 121 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 269.5 ms