RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 OR4M2Q8NGB6 313 aa8.49□□□□□ -1.05
SCFD1-220ENST00000556486 ADAMTS16Q8TE57 1224 aa8.49□□□□□ -1.05
SCFD1-220ENST00000556486 C1orf147Q96MC9 270 aaPredicted RBP8.49□□□□□ -1.05
SCFD1-220ENST00000556486 MCHR1Q99705 422 aa8.49□□□□□ -1.05
SCFD1-220ENST00000556486 BCL2L14Q9BZR8 327 aa8.49□□□□□ -1.05
SCFD1-220ENST00000556486 RABEP2Q9H5N1 569 aa8.49□□□□□ -1.05
SCFD1-220ENST00000556486 HINT3Q9NQE9 182 aaKnown RBP8.49□□□□□ -1.05
SCFD1-220ENST00000556486 NANSQ9NR45 359 aa8.49□□□□□ -1.05
SCFD1-220ENST00000556486 SLCO1C1Q9NYB5 712 aa8.49□□□□□ -1.05
SCFD1-220ENST00000556486 GRHPRQ9UBQ7 328 aa8.49□□□□□ -1.05
SCFD1-220ENST00000556486 KMT2CQ8NEZ4 4911 aaKnown RBP8.49□□□□□ -1.05
SCFD1-220ENST00000556486 RYR3Q15413 4870 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 A0A1W2PPW3 197 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 TRAPPC13A5PLN9 417 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 J3KRW8 73 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 M0QX08 132 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 OR6A2O95222 327 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 IGHV3-13P01766 116 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 IGHG1P01857 330 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 MMP7P09237 267 aaPredicted RBP8.48□□□□□ -1.05
SCFD1-220ENST00000556486 PATE4P0C8F1 98 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 PCGF2P35227 344 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 RBMXP38159 391 aaKnown RBP8.48□□□□□ -1.05
SCFD1-220ENST00000556486 RAD52P43351 418 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 MAGEB1P43366 347 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 UCP2P55851 309 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 MOGQ16653 247 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 SLC36A2Q495M3 483 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 BEND6Q5SZJ8 279 aaPredicted RBP8.48□□□□□ -1.05
SCFD1-220ENST00000556486 C10orf128Q5T292 105 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 ACSM5Q6NUN0 579 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 RBMS3Q6XE24 437 aaKnown RBP8.48□□□□□ -1.05
SCFD1-220ENST00000556486 PATL1Q86TB9 770 aaKnown RBP8.48□□□□□ -1.05
SCFD1-220ENST00000556486 C1orf174Q8IYL3 243 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 PAQR4Q8N4S7 273 aaPredicted RBP8.48□□□□□ -1.05
SCFD1-220ENST00000556486 C10orf53Q8N6V4 93 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 DTX3Q8N9I9 347 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 SMYD1Q8NB12 490 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 OR4K5Q8NGD3 323 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 OR4D11Q8NGI4 311 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 OR1J2Q8NGS2 313 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 NANPQ8TBE9 248 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 SYNPRQ8TBG9 265 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 SNX33Q8WV41 574 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 LIPHQ8WWY8 451 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 C11orf40Q8WZ69 217 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 MCHR2Q969V1 340 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 ZBTB9Q96C00 473 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 NMD3Q96D46 503 aaKnown RBP8.48□□□□□ -1.05
SCFD1-220ENST00000556486 PRSS27Q9BQR3 290 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 KAT8Q9H7Z6 458 aaKnown RBP8.48□□□□□ -1.05
SCFD1-220ENST00000556486 SMURF2Q9HAU4 748 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 MEPEQ9NQ76 525 aaPredicted RBP8.48□□□□□ -1.05
SCFD1-220ENST00000556486 C19orf73Q9NVV2 129 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 PDP1Q9P0J1 537 aaPredicted RBP8.48□□□□□ -1.05
SCFD1-220ENST00000556486 OPN4Q9UHM6 478 aa8.48□□□□□ -1.05
SCFD1-220ENST00000556486 LEF1Q9UJU2 399 aaPredicted RBP8.48□□□□□ -1.05
SCFD1-220ENST00000556486 SOX21Q9Y651 276 aaPredicted RBP8.48□□□□□ -1.05
SCFD1-220ENST00000556486 C11orf98E9PRG8 122 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 J3QLI3 93 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 RNF13O43567 381 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 SERPINI2O75830 405 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 CH25HO95992 272 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 CLPTM1O96005 669 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 ADH4P08319 380 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 VIMP08670 466 aaKnown RBP8.47□□□□□ -1.05
SCFD1-220ENST00000556486 QDPRP09417 244 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 GATA3P23771 443 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 PRTN3P24158 256 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 RBM34P42696 430 aaKnown RBP8.47□□□□□ -1.05
SCFD1-220ENST00000556486 CRYBA2P53672 197 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 CCL8P80075 99 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 LCN2P80188 198 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 MRPS34P82930 218 aaKnown RBP8.47□□□□□ -1.05
SCFD1-220ENST00000556486 BAMBIQ13145 260 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 CYP51A1Q16850 503 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 TBC1D28Q2M2D7 210 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 AGKQ53H12 422 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 INTS11Q5TA45 600 aaKnown RBP8.47□□□□□ -1.05
SCFD1-220ENST00000556486 AGBL2Q5U5Z8 902 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 TMEM53Q6P2H8 277 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 TMEM154Q6P9G4 183 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 TTC33Q6PID6 262 aaPredicted RBP8.47□□□□□ -1.05
SCFD1-220ENST00000556486 CCDC80Q76M96 950 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 SLC16A14Q7RTX9 510 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 HDDC2Q7Z4H3 204 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 DHDDSQ86SQ9 333 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 ATG16L2Q8NAA4 619 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 LRRC8CQ8TDW0 803 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 RASSF5Q8WWW0 418 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 GTF3AQ92664 365 aaKnown RBP8.47□□□□□ -1.05
SCFD1-220ENST00000556486 DVL3Q92997 716 aaPredicted RBP8.47□□□□□ -1.05
SCFD1-220ENST00000556486 TAMM41Q96BW9 452 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 RAB39BQ96DA2 213 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 ZNF48Q96MX3 618 aaPredicted RBP8.47□□□□□ -1.05
SCFD1-220ENST00000556486 CGREF1Q99674 301 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 SH3GL3Q99963 347 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 POLR2J2Q9GZM3 115 aaKnown RBP8.47□□□□□ -1.05
SCFD1-220ENST00000556486 POLR2J3Q9H1A7 115 aaKnown RBP8.47□□□□□ -1.05
SCFD1-220ENST00000556486 LRMDAQ9H2I8 198 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms