RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 KMT2CQ8NEZ4 4911 aaKnown RBP11.61□□□□□ -0.55
ACTN1-219ENST00000556432 DOCK11Q5JSL3 2073 aa11.6□□□□□ -0.55
ACTN1-219ENST00000556432 IGHV3-64DA0A0J9YX35 117 aa11.6□□□□□ -0.55
ACTN1-219ENST00000556432 LRRC30A6NM36 301 aa11.6□□□□□ -0.55
ACTN1-219ENST00000556432 CENPBD1B2RD01 187 aa11.6□□□□□ -0.55
ACTN1-219ENST00000556432 H0YL77 283 aa11.6□□□□□ -0.55
ACTN1-219ENST00000556432 SFTPBP07988 381 aa11.6□□□□□ -0.55
ACTN1-219ENST00000556432 ASAH2BP0C7U1 165 aa11.6□□□□□ -0.55
ACTN1-219ENST00000556432 KITP10721 976 aa11.6□□□□□ -0.55
ACTN1-219ENST00000556432 LAP3P28838 519 aa11.6□□□□□ -0.55
ACTN1-219ENST00000556432 PCBD1P61457 104 aa11.6□□□□□ -0.55
ACTN1-219ENST00000556432 RPL18Q07020 188 aaKnown RBP11.6□□□□□ -0.55
ACTN1-219ENST00000556432 PTOV1Q86YD1 416 aa11.6□□□□□ -0.55
ACTN1-219ENST00000556432 OR5AS1Q8N127 324 aa11.6□□□□□ -0.55
ACTN1-219ENST00000556432 SCCPDHQ8NBX0 429 aa11.6□□□□□ -0.55
ACTN1-219ENST00000556432 OR10AD1Q8NGE0 317 aa11.6□□□□□ -0.55
ACTN1-219ENST00000556432 OR9I1Q8NGQ6 314 aa11.6□□□□□ -0.55
ACTN1-219ENST00000556432 GTF2H4Q92759 462 aa11.6□□□□□ -0.55
ACTN1-219ENST00000556432 PAIP2Q9BPZ3 127 aaKnown RBP11.6□□□□□ -0.55
ACTN1-219ENST00000556432 TRIM15Q9C019 465 aa11.6□□□□□ -0.55
ACTN1-219ENST00000556432 INIPQ9NRY2 104 aa11.6□□□□□ -0.55
ACTN1-219ENST00000556432 ACOXLQ9NUZ1 547 aa11.6□□□□□ -0.55
ACTN1-219ENST00000556432 ZIM2Q9NZV7 527 aa11.6□□□□□ -0.55
ACTN1-219ENST00000556432 STX18Q9P2W9 335 aaKnown RBP11.6□□□□□ -0.55
ACTN1-219ENST00000556432 SLC7A7Q9UM01 511 aa11.6□□□□□ -0.55
ACTN1-219ENST00000556432 TIMM10BQ9Y5J6 103 aa11.6□□□□□ -0.55
ACTN1-219ENST00000556432 A0A1W2PPL8 197 aa11.59□□□□□ -0.55
ACTN1-219ENST00000556432 GMNCA6NCL1 334 aa11.59□□□□□ -0.55
ACTN1-219ENST00000556432 TNFRSF13BO14836 293 aaPredicted RBP11.59□□□□□ -0.55
ACTN1-219ENST00000556432 HDAC3O15379 428 aa11.59□□□□□ -0.55
ACTN1-219ENST00000556432 TOX4O94842 621 aa11.59□□□□□ -0.55
ACTN1-219ENST00000556432 VIMP08670 466 aaKnown RBP11.59□□□□□ -0.55
ACTN1-219ENST00000556432 NR2C1P13056 603 aa11.59□□□□□ -0.55
ACTN1-219ENST00000556432 KITLGP21583 273 aa11.59□□□□□ -0.55
ACTN1-219ENST00000556432 UGT2B15P54855 530 aa11.59□□□□□ -0.55
ACTN1-219ENST00000556432 TOP3AQ13472 1001 aaPredicted RBP11.59□□□□□ -0.55
ACTN1-219ENST00000556432 ENTPD8Q5MY95 495 aa11.59□□□□□ -0.55
ACTN1-219ENST00000556432 DHRS7BQ6IAN0 325 aaPredicted RBP11.59□□□□□ -0.55
ACTN1-219ENST00000556432 LINC00114Q6XXX2 140 aa11.59□□□□□ -0.55
ACTN1-219ENST00000556432 GDPGP1Q6ZNW5 385 aa11.59□□□□□ -0.55
ACTN1-219ENST00000556432 ADAMTS16Q8TE57 1224 aa11.59□□□□□ -0.55
ACTN1-219ENST00000556432 TECTBQ96PL2 329 aa11.59□□□□□ -0.55
ACTN1-219ENST00000556432 SEPHS2Q99611 448 aa11.59□□□□□ -0.55
ACTN1-219ENST00000556432 EVA1AQ9H8M9 152 aa11.59□□□□□ -0.55
ACTN1-219ENST00000556432 SMURF2Q9HAU4 748 aa11.59□□□□□ -0.55
ACTN1-219ENST00000556432 NDRG4Q9ULP0 352 aaKnown RBP11.59□□□□□ -0.55
ACTN1-219ENST00000556432 TET2Q6N021 2002 aaPredicted RBP11.59□□□□□ -0.55
ACTN1-219ENST00000556432 IGKV1D-43A0A0B4J1Z2 117 aa11.58□□□□□ -0.56
ACTN1-219ENST00000556432 C22orf46C9J442 243 aa11.58□□□□□ -0.56
ACTN1-219ENST00000556432 P2RY10O00398 339 aa11.58□□□□□ -0.56
ACTN1-219ENST00000556432 PHYHO14832 338 aa11.58□□□□□ -0.56
ACTN1-219ENST00000556432 ICMTO60725 284 aa11.58□□□□□ -0.56
ACTN1-219ENST00000556432 OPN1MWP04001 364 aa11.58□□□□□ -0.56
ACTN1-219ENST00000556432 CST2P09228 141 aa11.58□□□□□ -0.56
ACTN1-219ENST00000556432 OPN1MW2P0DN77 364 aa11.58□□□□□ -0.56
ACTN1-219ENST00000556432 OPN1MW3P0DN78 364 aa11.58□□□□□ -0.56
ACTN1-219ENST00000556432 CFHR2P36980 270 aa11.58□□□□□ -0.56
ACTN1-219ENST00000556432 AQP2P41181 271 aa11.58□□□□□ -0.56
ACTN1-219ENST00000556432 HTR5AP47898 357 aa11.58□□□□□ -0.56
ACTN1-219ENST00000556432 SRP9P49458 86 aaKnown RBP11.58□□□□□ -0.56
ACTN1-219ENST00000556432 ZNF133P52736 654 aaPredicted RBP11.58□□□□□ -0.56
ACTN1-219ENST00000556432 LOXL3P58215 753 aa11.58□□□□□ -0.56
ACTN1-219ENST00000556432 GUCY1A3Q02108 690 aa11.58□□□□□ -0.56
ACTN1-219ENST00000556432 EGR3Q06889 387 aa11.58□□□□□ -0.56
ACTN1-219ENST00000556432 ZNF404Q494X3 552 aa11.58□□□□□ -0.56
ACTN1-219ENST00000556432 FAM201AQ5SY85 155 aa11.58□□□□□ -0.56
ACTN1-219ENST00000556432 SAMD5Q5TGI4 173 aa11.58□□□□□ -0.56
ACTN1-219ENST00000556432 FAM27BQ5VT28 67 aa11.58□□□□□ -0.56
ACTN1-219ENST00000556432 WDR25Q64LD2 544 aaPredicted RBP11.58□□□□□ -0.56
ACTN1-219ENST00000556432 C1orf94Q6P1W5 598 aa11.58□□□□□ -0.56
ACTN1-219ENST00000556432 Q6ZSV7 163 aa11.58□□□□□ -0.56
ACTN1-219ENST00000556432 MOGAT3Q86VF5 341 aa11.58□□□□□ -0.56
ACTN1-219ENST00000556432 C1orf87Q8N0U7 546 aa11.58□□□□□ -0.56
ACTN1-219ENST00000556432 C10orf111Q8N326 155 aa11.58□□□□□ -0.56
ACTN1-219ENST00000556432 MEGF10Q96KG7 1140 aa11.58□□□□□ -0.56
ACTN1-219ENST00000556432 ROPN1BQ9BZX4 212 aaPredicted RBP11.58□□□□□ -0.56
ACTN1-219ENST00000556432 DPAGT1Q9H3H5 408 aa11.58□□□□□ -0.56
ACTN1-219ENST00000556432 MMADHCQ9H3L0 296 aaPredicted RBP11.58□□□□□ -0.56
ACTN1-219ENST00000556432 ROPN1Q9HAT0 212 aaPredicted RBP11.58□□□□□ -0.56
ACTN1-219ENST00000556432 SDR39U1Q9NRG7 319 aaPredicted RBP11.58□□□□□ -0.56
ACTN1-219ENST00000556432 NOTCH3Q9UM47 2321 aa11.57□□□□□ -0.56
ACTN1-219ENST00000556432 IGHV1-69DA0A0B4J2H0 117 aa11.57□□□□□ -0.56
ACTN1-219ENST00000556432 CENPVL3A0A0U1RRI6 287 aa11.57□□□□□ -0.56
ACTN1-219ENST00000556432 TRAPPC13A5PLN9 417 aa11.57□□□□□ -0.56
ACTN1-219ENST00000556432 BTBD17A6NE02 478 aa11.57□□□□□ -0.56
ACTN1-219ENST00000556432 UBDO15205 165 aa11.57□□□□□ -0.56
ACTN1-219ENST00000556432 IGHV1-69P01742 117 aa11.57□□□□□ -0.56
ACTN1-219ENST00000556432 OPN1SWP03999 348 aa11.57□□□□□ -0.56
ACTN1-219ENST00000556432 IRF2P14316 349 aa11.57□□□□□ -0.56
ACTN1-219ENST00000556432 TUBG1P23258 451 aa11.57□□□□□ -0.56
ACTN1-219ENST00000556432 PPIBP23284 216 aaKnown RBP11.57□□□□□ -0.56
ACTN1-219ENST00000556432 ERFP50548 548 aa11.57□□□□□ -0.56
ACTN1-219ENST00000556432 KPRPQ5T749 579 aaPredicted RBP11.57□□□□□ -0.56
ACTN1-219ENST00000556432 METTL11BQ5VVY1 283 aa11.57□□□□□ -0.56
ACTN1-219ENST00000556432 Q6ZTK2 550 aa11.57□□□□□ -0.56
ACTN1-219ENST00000556432 ZSCAN4Q8NAM6 433 aaPredicted RBP11.57□□□□□ -0.56
ACTN1-219ENST00000556432 OR6T1Q8NGN1 323 aa11.57□□□□□ -0.56
ACTN1-219ENST00000556432 LRTOMTQ8WZ04 291 aa11.57□□□□□ -0.56
ACTN1-219ENST00000556432 HDAC2Q92769 488 aaKnown RBP11.57□□□□□ -0.56
ACTN1-219ENST00000556432 LHX4Q969G2 390 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms