RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 MRGPREQ86SM8 312 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 CA13Q8N1Q1 262 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 TCEANCQ8N8B7 351 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 OR5L1Q8NGL2 311 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 OR13C5Q8NGS8 318 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 OR52P1PQ8NH57 321 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 BRIX1Q8TDN6 353 aaKnown RBP4.62□□□□□ -1.67
TMEM260-210ENST00000556422 HYLS1Q96M11 299 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 SDF2Q99470 211 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 ALKBH7Q9BT30 221 aaPredicted RBP4.62□□□□□ -1.67
TMEM260-210ENST00000556422 ZNF350Q9GZX5 532 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 OR51E2Q9H255 320 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 DSN1Q9H410 356 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 POMT2Q9UKY4 750 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 CACNA1EQ15878 2313 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 COL5A1P20908 1838 aaPredicted RBP4.62□□□□□ -1.67
TMEM260-210ENST00000556422 IGHV1OR15-9A0A0B4J2B8 117 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 C2orf72A6NCS6 295 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 ZNF705EA8MWA4 302 aaPredicted RBP4.62□□□□□ -1.67
TMEM260-210ENST00000556422 CDRT15L2A8MXV6 281 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 DISC1C4P0D8 188 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 SLC33A1O00400 549 aaPredicted RBP4.62□□□□□ -1.67
TMEM260-210ENST00000556422 HS3ST1O14792 307 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 AIREO43918 545 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 AQP8O94778 261 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 BMP4P12644 408 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 C4BPBP20851 252 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 GSTM3P21266 225 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 AVPR1BP47901 424 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 GIPRP48546 466 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 RAB25P57735 213 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 SMIM11AP58511 58 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 SLC25A30Q5SVS4 291 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 TMEM88Q6PEY1 159 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 PAQR6Q6TCH4 344 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 C19orf35Q6ZS72 473 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 LINC00299Q6ZSB3 139 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 SKA3Q8IX90 412 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 UBAC2Q8NBM4 344 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 OR14K1Q8NGZ2 314 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 ZNF431Q8TF32 576 aaPredicted RBP4.62□□□□□ -1.67
TMEM260-210ENST00000556422 ACOT12Q8WYK0 555 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 HOXB13Q92826 284 aaPredicted RBP4.62□□□□□ -1.67
TMEM260-210ENST00000556422 ANKRD9Q96BM1 317 aaPredicted RBP4.62□□□□□ -1.67
TMEM260-210ENST00000556422 BOD1Q96IK1 185 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 TBX5Q99593 518 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 TEAD3Q99594 435 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 TSNAXQ99598 290 aaKnown RBP4.62□□□□□ -1.67
TMEM260-210ENST00000556422 DDA1Q9BW61 102 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 TPSD1Q9BZJ3 242 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 DCSTAMPQ9H295 470 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 HHATLQ9HCP6 504 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 PTGFRNQ9P2B2 879 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 ELF5Q9UKW6 265 aaPredicted RBP4.62□□□□□ -1.67
TMEM260-210ENST00000556422 ZNF443Q9Y2A4 671 aaPredicted RBP4.62□□□□□ -1.67
TMEM260-210ENST00000556422 SLC22A23A1A5C7 686 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 SGK494L7N484 410 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 CHST10O43529 356 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 CSO75390 466 aaKnown RBP4.61□□□□□ -1.67
TMEM260-210ENST00000556422 RFPL3O75679 317 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 FBXO45P0C2W1 286 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 HTR2AP28223 471 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 EMP2P54851 167 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 GXYLT1Q4G148 440 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 OXLD1Q5BKU9 147 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 RGS7BPQ6MZT1 257 aaPredicted RBP4.61□□□□□ -1.67
TMEM260-210ENST00000556422 ZNF529Q6P280 563 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 SMARCD3Q6STE5 483 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 ZAR1Q86SH2 424 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 PEG10Q86TG7 708 aaKnown RBP4.61□□□□□ -1.67
TMEM260-210ENST00000556422 PARGQ86W56 976 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 ANGPTL5Q86XS5 388 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 FAM58AQ8N1B3 248 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 CSNK1A1LQ8N752 337 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 YIPF7Q8N8F6 280 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 GDPD1Q8N9F7 314 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 TMEM255BQ8WV15 326 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 SAT2Q96F10 170 aaPredicted RBP4.61□□□□□ -1.67
TMEM260-210ENST00000556422 TRMT61AQ96FX7 289 aaKnown RBP4.61□□□□□ -1.67
TMEM260-210ENST00000556422 FAM46AQ96IP4 442 aaKnown RBP4.61□□□□□ -1.67
TMEM260-210ENST00000556422 MGLLQ99685 303 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 PRSS27Q9BQR3 290 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 NAA11Q9BSU3 229 aaPredicted RBP4.61□□□□□ -1.67
TMEM260-210ENST00000556422 GSX2Q9BZM3 304 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 COMMD4Q9H0A8 199 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 ENKD1Q9H0I2 346 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 SLITRK2Q9H156 845 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 PRO3102Q9H379 93 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 LPAR2Q9HBW0 351 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 SLC2A4RGQ9NR83 387 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 SLC2A9Q9NRM0 540 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 GPR173Q9NS66 373 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 CLN6Q9NWW5 311 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 TESQ9UGI8 421 aaKnown RBP4.61□□□□□ -1.67
TMEM260-210ENST00000556422 WDR45Q9Y484 360 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 KPTNQ9Y664 436 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 NUP210LQ5VU65 1888 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 TMEM72A0PK05 275 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 DNASE2O00115 360 aaPredicted RBP4.61□□□□□ -1.67
TMEM260-210ENST00000556422 CDC42EP2O14613 210 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms