RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 SLC6A8P48029 635 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 SRP9P49458 86 aaKnown RBP3.96□□□□□ -1.78
ATXN3-241ENST00000556374 VEGFCP49767 419 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 DIO1P49895 249 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 CCR6P51684 374 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 AGFG1P52594 562 aaKnown RBP3.96□□□□□ -1.78
ATXN3-241ENST00000556374 SLC25A1P53007 311 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 DLX5P56178 289 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 PROK1P58294 105 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 TAS2R20P59543 309 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 ACTBP60709 375 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 ARF3P61204 181 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-241ENST00000556374 YPEL5P62699 121 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 ACTG1P63261 375 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 RASGEF1BQ0VAM2 473 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 BIKQ13323 160 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 EXOSC2Q13868 293 aaKnown RBP3.96□□□□□ -1.78
ATXN3-241ENST00000556374 KLF9Q13886 244 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-241ENST00000556374 RUNX2Q13950 521 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 SERTAD2Q14140 314 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 FGL2Q14314 439 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 KIR2DS5Q14953 304 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 RBMS2Q15434 407 aaKnown RBP3.96□□□□□ -1.78
ATXN3-241ENST00000556374 GSG1Q2KHT4 349 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 ISXQ2M1V0 245 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 PRICKLE4Q2TBC4 344 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 SLC25A35Q3KQZ1 300 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 Q499Y3 187 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 TRMT12Q53H54 448 aaKnown RBP3.96□□□□□ -1.78
ATXN3-241ENST00000556374 Q5BKY6 102 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 TCTE1Q5JU00 501 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 FHL5Q5TD97 284 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 OLFML2AQ68BL7 652 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 SUMO4Q6EEV6 95 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 LEG1Q6P5S2 330 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 PARM1Q6UWI2 310 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 KIRREL2Q6UWL6 708 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 C3P1Q6ZMU1 363 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 CHMP1BQ7LBR1 199 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 SLC16A9Q7RTY1 509 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 ABI3BPQ7Z7G0 1075 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 PEG10Q86TG7 708 aaKnown RBP3.96□□□□□ -1.78
ATXN3-241ENST00000556374 TMPRSS12Q86WS5 348 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 CCDC36Q8IYA8 594 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 CA13Q8N1Q1 262 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 SDR16C5Q8N3Y7 309 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 ZNF843Q8N446 348 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 LSMEM1Q8N8F7 131 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 LSM14AQ8ND56 463 aaKnown RBP3.96□□□□□ -1.78
ATXN3-241ENST00000556374 C7orf57Q8NEG2 295 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 C17orf47Q8NEP4 570 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 DEFB124Q8NES8 71 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 OR13C5Q8NGS8 318 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 OR6N2Q8NGY6 317 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 OR2T4Q8NH00 348 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 ZNF563Q8TA94 476 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 SYNPRQ8TBG9 265 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 POC1BQ8TC44 478 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 IFI44Q8TCB0 444 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 TNFAIP8L1Q8WVP5 186 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 ZFPM2Q8WW38 1151 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 OIT3Q8WWZ8 545 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 OR1E3Q8WZA6 343 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 CNOT9Q92600 299 aaKnown RBP3.96□□□□□ -1.78
ATXN3-241ENST00000556374 PIGKQ92643 395 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 RIT1Q92963 219 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 TM4SF19Q96DZ7 209 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 ELMOD3Q96FG2 381 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 SIPA1Q96FS4 1042 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 MRGPRX4Q96LA9 322 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 ADAD1Q96M93 576 aaKnown RBP3.96□□□□□ -1.78
ATXN3-241ENST00000556374 KLHL15Q96M94 604 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 LRRC3BQ96PB8 259 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 TNFRSF13CQ96RJ3 184 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 ABHD1Q96SE0 405 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 NRTNQ99748 197 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 ZNF649Q9BS31 505 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 RPP25Q9BUL9 199 aaKnown RBP3.96□□□□□ -1.78
ATXN3-241ENST00000556374 DPCDQ9BVM2 203 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-241ENST00000556374 HCAR1Q9BXC0 346 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 POTEKPQ9BYX7 375 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 OR10A4Q9H209 315 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 C6orf106Q9H6K1 298 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-241ENST00000556374 METTL17Q9H7H0 456 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-241ENST00000556374 MCCC2Q9HCC0 563 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 HRASLSQ9HDD0 168 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 NOX4Q9NPH5 578 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 TMEM138Q9NPI0 162 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 PRTFDC1Q9NRG1 225 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 HCN3Q9P1Z3 774 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 GRHPRQ9UBQ7 328 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 KCNN3Q9UGI6 736 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 SERGEFQ9UGK8 458 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 LAMP5Q9UJQ1 280 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 SERTAD3Q9UJW9 196 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 PPIEQ9UNP9 301 aaKnown RBP3.96□□□□□ -1.78
ATXN3-241ENST00000556374 MRPS17Q9Y2R5 130 aaKnown RBP3.96□□□□□ -1.78
ATXN3-241ENST00000556374 AK6Q9Y3D8 172 aaKnown RBP3.96□□□□□ -1.78
ATXN3-241ENST00000556374 PLEKHM1Q9Y4G2 1056 aa3.96□□□□□ -1.78
ATXN3-241ENST00000556374 PCDHGA5Q9Y5G8 931 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms