RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 BBS10Q8TAM1 723 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 IGFBPL1Q8WX77 278 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 CNOT9Q92600 299 aaKnown RBP3.47□□□□□ -1.85
LINC00648-202ENST00000555985 CREB3L1Q96BA8 519 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 TMEM19Q96HH6 336 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 ZNF845Q96IR2 970 aaPredicted RBP3.47□□□□□ -1.85
LINC00648-202ENST00000555985 ARL5BQ96KC2 179 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 SFXN2Q96NB2 322 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 OR5M11Q96RB7 305 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 ARHGDIGQ99819 225 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 THUMPD3Q9BV44 507 aaKnown RBP3.47□□□□□ -1.85
LINC00648-202ENST00000555985 ZNF436Q9C0F3 470 aaPredicted RBP3.47□□□□□ -1.85
LINC00648-202ENST00000555985 BCO1Q9HAY6 547 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 EXOSC4Q9NPD3 245 aaKnown RBP3.47□□□□□ -1.85
LINC00648-202ENST00000555985 BIN3Q9NQY0 253 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 PLSCR4Q9NRQ2 329 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 PDP1Q9P0J1 537 aaPredicted RBP3.47□□□□□ -1.85
LINC00648-202ENST00000555985 P2RX2Q9UBL9 471 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 NDRG3Q9UGV2 375 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 ZNF222Q9UK12 451 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 EDARQ9UNE0 448 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 MGAT4BQ9UQ53 548 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 CAMK2AQ9UQM7 478 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 CACNA1CQ13936 2221 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 A1L4Q6 167 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 C7orf66A4D0T2 115 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 RAB19A4D1S5 217 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 ZNF716A6NP11 495 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 A8MXE2 369 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 FTCDNL1E5RQL4 147 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 DNPH1O43598 174 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 AKAP8O43823 692 aaKnown RBP3.47□□□□□ -1.85
LINC00648-202ENST00000555985 EIF1BO60739 113 aaKnown RBP3.47□□□□□ -1.85
LINC00648-202ENST00000555985 CYTIPO60759 359 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 HPGDSO60760 199 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 AQP8O94778 261 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 PMS2P2O95744 297 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 SERPINA1P01009 418 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 POU2F1P14859 743 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 KLK2P20151 261 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 POU3F2P20265 443 aaPredicted RBP3.47□□□□□ -1.85
LINC00648-202ENST00000555985 PPIBP23284 216 aaKnown RBP3.47□□□□□ -1.85
LINC00648-202ENST00000555985 APEX1P27695 318 aaKnown RBP3.47□□□□□ -1.85
LINC00648-202ENST00000555985 HTR2AP28223 471 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 NTF4P34130 210 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 PCGF2P35227 344 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 CHI3L1P36222 383 aaPredicted RBP3.47□□□□□ -1.85
LINC00648-202ENST00000555985 GGT2P36268 569 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 APOBEC1P41238 236 aaKnown RBP3.47□□□□□ -1.85
LINC00648-202ENST00000555985 NUDT6P53370 316 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 SLC16A1P53985 500 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 FGL1Q08830 312 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 RBBP4Q09028 425 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 PIN1Q13526 163 aaPredicted RBP3.47□□□□□ -1.85
LINC00648-202ENST00000555985 CAMK2DQ13557 499 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 MED22Q15528 200 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 SNAPC1Q16533 368 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 TM4SF20Q53R12 229 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 RPS26P11Q5JNZ5 115 aaPredicted RBP3.47□□□□□ -1.85
LINC00648-202ENST00000555985 MRPL2Q5T653 305 aaKnown RBP3.47□□□□□ -1.85
LINC00648-202ENST00000555985 ALKBH2Q6NS38 261 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 FAHD1Q6P587 224 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 ZNF474Q6S9Z5 364 aaPredicted RBP3.47□□□□□ -1.85
LINC00648-202ENST00000555985 LUZP2Q86TE4 346 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 VRK2Q86Y07 508 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 Q8N402 240 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 NKAIN3Q8N8D7 197 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 GATSQ8NAP1 163 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 GPR32P1Q8NGA4 272 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 OR6S1Q8NH40 331 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 OR10D3Q8NH80 312 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 OR2V1Q8NHB1 315 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 NANPQ8TBE9 248 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 PHOSPHO1Q8TCT1 267 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 XAGE5Q8WWM1 108 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 NSMAFQ92636 917 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 MAL2Q969L2 176 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 SLC25A46Q96AG3 418 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 TRIB1Q96RU8 372 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 KCNJ15Q99712 375 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 SOSTQ9BQB4 213 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 TMEM43Q9BTV4 400 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 ZNF426Q9BUY5 554 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 PTDSS2Q9BVG9 487 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 CDCA4Q9BXL8 241 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 GABARAPL3Q9BY60 117 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 OR10A4Q9H209 315 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 PPP1R3EQ9H7J1 279 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 EVA1AQ9H8M9 152 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.47□□□□□ -1.85
LINC00648-202ENST00000555985 BABAM2Q9NXR7 383 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 CALML5Q9NZT1 146 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 MLXQ9UH92 298 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 PURGQ9UJV8 347 aaKnown RBP3.47□□□□□ -1.85
LINC00648-202ENST00000555985 HECTD1Q9ULT8 2610 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 STUB1Q9UNE7 303 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 RPH3AQ9Y2J0 694 aaPredicted RBP3.47□□□□□ -1.85
LINC00648-202ENST00000555985 TACC2O95359 2948 aa3.47□□□□□ -1.85
LINC00648-202ENST00000555985 IGKV1D-42A0A075B6H8 117 aa3.46□□□□□ -1.85
LINC00648-202ENST00000555985 TMEM72A0PK05 275 aa3.46□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms