RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 FGFBP3Q8TAT2 258 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 IPCEF1Q8WWN9 437 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-221ENST00000555773 ASB17Q8WXJ9 295 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 HTRA1Q92743 480 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 DACH2Q96NX9 599 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 WFIKKN1Q96NZ8 548 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 MED18Q9BUE0 208 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 OR2H1Q9GZK4 316 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 FGF20Q9NP95 211 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-221ENST00000555773 NGBQ9NPG2 151 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 NPDC1Q9NQX5 325 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-221ENST00000555773 INPP5EQ9NRR6 644 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 ZNF224Q9NZL3 707 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 CRNNQ9UBG3 495 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-221ENST00000555773 LAMP5Q9UJQ1 280 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 BLOC1S6Q9UL45 172 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 LRCH1Q9Y2L9 728 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 LHFPL6Q9Y693 200 aa10.88□□□□□ -0.67
SHMT2-221ENST00000555773 SPTAN1Q13813 2472 aaKnown RBP10.87□□□□□ -0.67
SHMT2-221ENST00000555773 IQCMA0A1B0GVH7 501 aa10.87□□□□□ -0.67
SHMT2-221ENST00000555773 ZNF670-ZNF695F2Z2N8 137 aa10.87□□□□□ -0.67
SHMT2-221ENST00000555773 SLC1A7O00341 560 aa10.87□□□□□ -0.67
SHMT2-221ENST00000555773 SGCEO43556 437 aa10.87□□□□□ -0.67
SHMT2-221ENST00000555773 XPNPEP2O43895 674 aa10.87□□□□□ -0.67
SHMT2-221ENST00000555773 FAM20BO75063 409 aa10.87□□□□□ -0.67
SHMT2-221ENST00000555773 RAB36O95755 333 aa10.87□□□□□ -0.67
SHMT2-221ENST00000555773 SERPINA5P05154 406 aa10.87□□□□□ -0.67
SHMT2-221ENST00000555773 MRPL3P09001 348 aaKnown RBP10.87□□□□□ -0.67
SHMT2-221ENST00000555773 PATE4P0C8F1 98 aa10.87□□□□□ -0.67
SHMT2-221ENST00000555773 COX5BP10606 129 aa10.87□□□□□ -0.67
SHMT2-221ENST00000555773 GRNP28799 593 aaKnown RBP10.87□□□□□ -0.67
SHMT2-221ENST00000555773 NAA10P41227 235 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-221ENST00000555773 PSG4Q00888 419 aa10.87□□□□□ -0.67
SHMT2-221ENST00000555773 PIGFQ07326 219 aa10.87□□□□□ -0.67
SHMT2-221ENST00000555773 ECH1Q13011 328 aa10.87□□□□□ -0.67
SHMT2-221ENST00000555773 EIF2B1Q14232 305 aaKnown RBP10.87□□□□□ -0.67
SHMT2-221ENST00000555773 KCTD18Q6PI47 426 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-221ENST00000555773 CORO6Q6QEF8 472 aa10.87□□□□□ -0.67
SHMT2-221ENST00000555773 DEGS2Q6QHC5 323 aa10.87□□□□□ -0.67
SHMT2-221ENST00000555773 DCXRQ7Z4W1 244 aa10.87□□□□□ -0.67
SHMT2-221ENST00000555773 MDP1Q86V88 176 aa10.87□□□□□ -0.67
SHMT2-221ENST00000555773 LINC00346Q8IVM7 164 aa10.87□□□□□ -0.67
SHMT2-221ENST00000555773 ZNF786Q8N393 782 aa10.87□□□□□ -0.67
SHMT2-221ENST00000555773 ACBD7Q8N6N7 88 aa10.87□□□□□ -0.67
SHMT2-221ENST00000555773 ZNF540Q8NDQ6 660 aa10.87□□□□□ -0.67
SHMT2-221ENST00000555773 IL17RDQ8NFM7 739 aa10.87□□□□□ -0.67
SHMT2-221ENST00000555773 OR4F15Q8NGB8 312 aa10.87□□□□□ -0.67
SHMT2-221ENST00000555773 OR52I1Q8NGK6 324 aa10.87□□□□□ -0.67
SHMT2-221ENST00000555773 THEM6Q8WUY1 208 aa10.87□□□□□ -0.67
SHMT2-221ENST00000555773 MYDGFQ969H8 173 aa10.87□□□□□ -0.67
SHMT2-221ENST00000555773 MRPL48Q96GC5 212 aaKnown RBP10.87□□□□□ -0.67
SHMT2-221ENST00000555773 TMEM80Q96HE8 168 aa10.87□□□□□ -0.67
SHMT2-221ENST00000555773 ABHD6Q9BV23 337 aa10.87□□□□□ -0.67
SHMT2-221ENST00000555773 JAM3Q9BX67 310 aa10.87□□□□□ -0.67
SHMT2-221ENST00000555773 DUSP21Q9H596 190 aa10.87□□□□□ -0.67
SHMT2-221ENST00000555773 FKBP14Q9NWM8 211 aa10.87□□□□□ -0.67
SHMT2-221ENST00000555773 ATPIF1Q9UII2 106 aa10.87□□□□□ -0.67
SHMT2-221ENST00000555773 GDF2Q9UK05 429 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-221ENST00000555773 HELZ2Q9BYK8 2649 aaKnown RBP10.87□□□□□ -0.67
SHMT2-221ENST00000555773 LRRK2Q5S007 2527 aa10.86□□□□□ -0.67
SHMT2-221ENST00000555773 A0A1W2PR80 420 aa10.86□□□□□ -0.67
SHMT2-221ENST00000555773 ZNF503-AS2A6NEH8 195 aa10.86□□□□□ -0.67
SHMT2-221ENST00000555773 PTGES3LE9PB15 166 aa10.86□□□□□ -0.67
SHMT2-221ENST00000555773 CASKO14936 926 aa10.86□□□□□ -0.67
SHMT2-221ENST00000555773 RER1O15258 196 aa10.86□□□□□ -0.67
SHMT2-221ENST00000555773 IGKV3-15P01624 115 aa10.86□□□□□ -0.67
SHMT2-221ENST00000555773 IGHA1P01876 353 aa10.86□□□□□ -0.67
SHMT2-221ENST00000555773 LYNP07948 512 aa10.86□□□□□ -0.67
SHMT2-221ENST00000555773 RNF224P0DH78 156 aa10.86□□□□□ -0.67
SHMT2-221ENST00000555773 EPXP11678 715 aa10.86□□□□□ -0.67
SHMT2-221ENST00000555773 CRHBPP24387 322 aa10.86□□□□□ -0.67
SHMT2-221ENST00000555773 KIR2DL3P43628 341 aa10.86□□□□□ -0.67
SHMT2-221ENST00000555773 ST3GAL4Q11206 333 aa10.86□□□□□ -0.67
SHMT2-221ENST00000555773 RAB35Q15286 201 aa10.86□□□□□ -0.67
SHMT2-221ENST00000555773 CCDC92Q53HC0 331 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-221ENST00000555773 PABPC1L2AQ5JQF8 200 aa10.86□□□□□ -0.67
SHMT2-221ENST00000555773 ELFN2Q5R3F8 820 aa10.86□□□□□ -0.67
SHMT2-221ENST00000555773 OTPQ5XKR4 325 aa10.86□□□□□ -0.67
SHMT2-221ENST00000555773 STX19Q8N4C7 294 aa10.86□□□□□ -0.67
SHMT2-221ENST00000555773 OR10H4Q8NGA5 316 aa10.86□□□□□ -0.67
SHMT2-221ENST00000555773 ST7LQ8TDW4 575 aa10.86□□□□□ -0.67
SHMT2-221ENST00000555773 RNF133Q8WVZ7 376 aa10.86□□□□□ -0.67
SHMT2-221ENST00000555773 MAP6Q96JE9 813 aa10.86□□□□□ -0.67
SHMT2-221ENST00000555773 ZNF75AQ96N20 296 aa10.86□□□□□ -0.67
SHMT2-221ENST00000555773 COPS4Q9BT78 406 aa10.86□□□□□ -0.67
SHMT2-221ENST00000555773 HDHD2Q9H0R4 259 aa10.86□□□□□ -0.67
SHMT2-221ENST00000555773 WNT5BQ9H1J7 359 aa10.86□□□□□ -0.67
SHMT2-221ENST00000555773 CHCHD3Q9NX63 227 aaKnown RBP10.86□□□□□ -0.67
SHMT2-221ENST00000555773 PLEK2Q9NYT0 353 aa10.86□□□□□ -0.67
SHMT2-221ENST00000555773 DIMT1Q9UNQ2 313 aaKnown RBP10.86□□□□□ -0.67
SHMT2-221ENST00000555773 PCDHGB5Q9Y5G0 923 aa10.86□□□□□ -0.67
SHMT2-221ENST00000555773 A0A1W2PQL4 384 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-221ENST00000555773 DAPL1A0PJW8 107 aa10.85□□□□□ -0.67
SHMT2-221ENST00000555773 MRPS14O60783 128 aaKnown RBP10.85□□□□□ -0.67
SHMT2-221ENST00000555773 ZNF254O75437 659 aa10.85□□□□□ -0.67
SHMT2-221ENST00000555773 APOL3O95236 402 aa10.85□□□□□ -0.67
SHMT2-221ENST00000555773 IGLV1-44P01699 117 aa10.85□□□□□ -0.67
SHMT2-221ENST00000555773 THBDP07204 575 aa10.85□□□□□ -0.67
SHMT2-221ENST00000555773 IGFBP2P18065 325 aa10.85□□□□□ -0.67
SHMT2-221ENST00000555773 RPS27P42677 84 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms