RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 RBPJQ06330 500 aa8.96□□□□□ -0.97
SRP54-208ENST00000555557 SSX1Q16384 188 aa8.96□□□□□ -0.97
SRP54-208ENST00000555557 LIPKQ5VXJ0 399 aa8.96□□□□□ -0.97
SRP54-208ENST00000555557 ZNF813Q6ZN06 617 aa8.96□□□□□ -0.97
SRP54-208ENST00000555557 VASH1Q7L8A9 365 aaPredicted RBP8.96□□□□□ -0.97
SRP54-208ENST00000555557 ZNF554Q86TJ5 538 aa8.96□□□□□ -0.97
SRP54-208ENST00000555557 CLVS1Q8IUQ0 354 aaPredicted RBP8.96□□□□□ -0.97
SRP54-208ENST00000555557 ALDH16A1Q8IZ83 802 aa8.96□□□□□ -0.97
SRP54-208ENST00000555557 SLC22A24Q8N4F4 322 aa8.96□□□□□ -0.97
SRP54-208ENST00000555557 ZBTB8BQ8NAP8 495 aaPredicted RBP8.96□□□□□ -0.97
SRP54-208ENST00000555557 OR6K3Q8NGY3 331 aa8.96□□□□□ -0.97
SRP54-208ENST00000555557 FGFBP3Q8TAT2 258 aa8.96□□□□□ -0.97
SRP54-208ENST00000555557 FBXO17Q96EF6 278 aa8.96□□□□□ -0.97
SRP54-208ENST00000555557 PELI1Q96FA3 418 aa8.96□□□□□ -0.97
SRP54-208ENST00000555557 DOCK7Q96N67 2140 aa8.96□□□□□ -0.97
SRP54-208ENST00000555557 OPN3Q9H1Y3 402 aaPredicted RBP8.96□□□□□ -0.97
SRP54-208ENST00000555557 SIAEQ9HAT2 523 aa8.96□□□□□ -0.97
SRP54-208ENST00000555557 ELOVL3Q9HB03 270 aa8.96□□□□□ -0.97
SRP54-208ENST00000555557 CENPMQ9NSP4 180 aa8.96□□□□□ -0.97
SRP54-208ENST00000555557 GDF2Q9UK05 429 aaPredicted RBP8.96□□□□□ -0.97
SRP54-208ENST00000555557 TRGV8A0A0C4DH27 118 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 CCDC160A6NGH7 325 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 ABHD16AO95870 558 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 IL18BPO95998 194 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 ITGA5P08648 1049 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 HOXD4P09016 255 aaPredicted RBP8.95□□□□□ -0.98
SRP54-208ENST00000555557 CD36P16671 472 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 NPR2P20594 1047 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 RGS6P49758 472 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 LSM6P62312 80 aaKnown RBP8.95□□□□□ -0.98
SRP54-208ENST00000555557 ACTA2P62736 377 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 ACTG2P63267 376 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 EGR3Q06889 387 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 FAM27BQ5VT28 67 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 LIPNQ5VXI9 398 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 OR7E24Q6IFN5 339 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 KRT77Q7Z794 578 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 SKA3Q8IX90 412 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 YIPF7Q8N8F6 280 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 ZNF454Q8N9F8 522 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 ZNF610Q8N9Z0 462 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 OR10S1Q8NGN2 331 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 OR2AJ1Q8NGZ0 328 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 OR52N5Q8NH56 324 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 HSD17B8Q92506 261 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 OR8B4Q96RC9 309 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 MNTQ99583 582 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 FUNDC2Q9BWH2 189 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 C1orf198Q9H425 327 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 MALT1Q9UDY8 824 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 CEPT1Q9Y6K0 416 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 METTL15A6NJ78 407 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 PHYHO14832 338 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 CGAP01215 116 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 KRT8P05787 483 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 CELP19835 753 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 IGHV1-2P23083 117 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 MPGP29372 298 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 CEACAM8P31997 349 aaPredicted RBP8.95□□□□□ -0.98
SRP54-208ENST00000555557 TGFBR2P37173 567 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 MLLT11Q13015 90 aaPredicted RBP8.95□□□□□ -0.98
SRP54-208ENST00000555557 MRPL49Q13405 166 aaKnown RBP8.95□□□□□ -0.98
SRP54-208ENST00000555557 TSC22D1Q15714 1073 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 SLC16A14Q7RTX9 510 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 PHC2Q8IXK0 858 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 ZNF679Q8IYX0 411 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 SYS1Q8N2H4 156 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 ST6GALNAC3Q8NDV1 305 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 ASB17Q8WXJ9 295 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 TMEM203Q969S6 136 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 RNF166Q96A37 237 aaPredicted RBP8.95□□□□□ -0.98
SRP54-208ENST00000555557 SLAMF6Q96DU3 332 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 YIPF6Q96EC8 236 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 WBP1Q96G27 269 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 MROQ9BYG7 248 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 PLSCR4Q9NRQ2 329 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 RHBDL2Q9NX52 303 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 FBXL3Q9UKT7 428 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 PAIP2BQ9ULR5 123 aaKnown RBP8.95□□□□□ -0.98
SRP54-208ENST00000555557 PROCRQ9UNN8 238 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 IGSF10Q6WRI0 2623 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 NBASA2RRP1 2371 aa8.95□□□□□ -0.98
SRP54-208ENST00000555557 SHANK1Q9Y566 2161 aa8.94□□□□□ -0.98
SRP54-208ENST00000555557 A0A0G2JNJ9 132 aa8.94□□□□□ -0.98
SRP54-208ENST00000555557 ZNF503-AS2A6NEH8 195 aa8.94□□□□□ -0.98
SRP54-208ENST00000555557 SULT1C4O75897 302 aa8.94□□□□□ -0.98
SRP54-208ENST00000555557 LYZL6O75951 148 aa8.94□□□□□ -0.98
SRP54-208ENST00000555557 CPEP16870 476 aa8.94□□□□□ -0.98
SRP54-208ENST00000555557 LSM3P62310 102 aaKnown RBP8.94□□□□□ -0.98
SRP54-208ENST00000555557 CBX3Q13185 183 aa8.94□□□□□ -0.98
SRP54-208ENST00000555557 HIKESHIQ53FT3 197 aa8.94□□□□□ -0.98
SRP54-208ENST00000555557 KCTD18Q6PI47 426 aaPredicted RBP8.94□□□□□ -0.98
SRP54-208ENST00000555557 LUZP2Q86TE4 346 aa8.94□□□□□ -0.98
SRP54-208ENST00000555557 RNF133Q8WVZ7 376 aa8.94□□□□□ -0.98
SRP54-208ENST00000555557 RPL3LQ92901 407 aaKnown RBP8.94□□□□□ -0.98
SRP54-208ENST00000555557 PPP1R14AQ96A00 147 aa8.94□□□□□ -0.98
SRP54-208ENST00000555557 BBC3Q96PG8 261 aaPredicted RBP8.94□□□□□ -0.98
SRP54-208ENST00000555557 RBM38Q9H0Z9 239 aaKnown RBP8.94□□□□□ -0.98
SRP54-208ENST00000555557 TMEM165Q9HC07 324 aa8.94□□□□□ -0.98
SRP54-208ENST00000555557 PNRC2Q9NPJ4 139 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms