RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 HSD17B10Q99714 261 aaKnown RBP1.54□□□□□ -2.16
SCFD1-216ENST00000555550 LTBP4Q8N2S1 1624 aa1.54□□□□□ -2.16
SCFD1-216ENST00000555550 A0A1B0GW55 424 aa1.53□□□□□ -2.16
SCFD1-216ENST00000555550 GMFGO60234 142 aa1.53□□□□□ -2.16
SCFD1-216ENST00000555550 TSPAN12O95859 305 aa1.53□□□□□ -2.16
SCFD1-216ENST00000555550 CD3GP09693 182 aa1.53□□□□□ -2.16
SCFD1-216ENST00000555550 DUX4L2P0CJ85 424 aa1.53□□□□□ -2.16
SCFD1-216ENST00000555550 DUX4L3P0CJ86 424 aa1.53□□□□□ -2.16
SCFD1-216ENST00000555550 DUX4L5P0CJ88 424 aa1.53□□□□□ -2.16
SCFD1-216ENST00000555550 DUX4L6P0CJ89 424 aa1.53□□□□□ -2.16
SCFD1-216ENST00000555550 DUX4L7P0CJ90 424 aa1.53□□□□□ -2.16
SCFD1-216ENST00000555550 IFNA8P32881 189 aa1.53□□□□□ -2.16
SCFD1-216ENST00000555550 CDKN2DP55273 166 aa1.53□□□□□ -2.16
SCFD1-216ENST00000555550 MXD1Q05195 221 aa1.53□□□□□ -2.16
SCFD1-216ENST00000555550 PPIL2Q13356 520 aa1.53□□□□□ -2.16
SCFD1-216ENST00000555550 CCDC152Q4G0S7 254 aa1.53□□□□□ -2.16
SCFD1-216ENST00000555550 ATAD3BQ5T9A4 648 aa1.53□□□□□ -2.16
SCFD1-216ENST00000555550 SLC25A48Q6ZT89 311 aaKnown RBP1.53□□□□□ -2.16
SCFD1-216ENST00000555550 TGIF2LXQ8IUE1 241 aa1.53□□□□□ -2.16
SCFD1-216ENST00000555550 FBXL13Q8NEE6 735 aa1.53□□□□□ -2.16
SCFD1-216ENST00000555550 TTLQ8NG68 377 aa1.53□□□□□ -2.16
SCFD1-216ENST00000555550 OR4F6Q8NGB9 312 aa1.53□□□□□ -2.16
SCFD1-216ENST00000555550 PIBF1Q8WXW3 757 aa1.53□□□□□ -2.16
SCFD1-216ENST00000555550 FGF23Q9GZV9 251 aaPredicted RBP1.53□□□□□ -2.16
SCFD1-216ENST00000555550 DHX35Q9H5Z1 703 aaKnown RBP1.53□□□□□ -2.16
SCFD1-216ENST00000555550 EXOSC4Q9NPD3 245 aaKnown RBP1.53□□□□□ -2.16
SCFD1-216ENST00000555550 DUX4Q9UBX2 424 aa1.53□□□□□ -2.16
SCFD1-216ENST00000555550 ING4Q9UNL4 249 aa1.53□□□□□ -2.16
SCFD1-216ENST00000555550 ST3GAL6Q9Y274 331 aa1.53□□□□□ -2.16
SCFD1-216ENST00000555550 SCN4AP35499 1836 aa1.52□□□□□ -2.17
SCFD1-216ENST00000555550 CNTNAP1P78357 1384 aa1.52□□□□□ -2.17
SCFD1-216ENST00000555550 MAPK8IP3Q9UPT6 1336 aa1.52□□□□□ -2.17
SCFD1-216ENST00000555550 SNTNA6NMZ2 147 aa1.52□□□□□ -2.17
SCFD1-216ENST00000555550 MRPS12O15235 138 aaKnown RBP1.52□□□□□ -2.17
SCFD1-216ENST00000555550 REM1O75628 298 aa1.52□□□□□ -2.17
SCFD1-216ENST00000555550 H6PDO95479 791 aa1.52□□□□□ -2.17
SCFD1-216ENST00000555550 HCAR3P49019 387 aa1.52□□□□□ -2.17
SCFD1-216ENST00000555550 GPX6P59796 221 aa1.52□□□□□ -2.17
SCFD1-216ENST00000555550 CDK5Q00535 292 aa1.52□□□□□ -2.17
SCFD1-216ENST00000555550 AVPI1Q5T686 147 aa1.52□□□□□ -2.17
SCFD1-216ENST00000555550 H2BFWTQ7Z2G1 175 aa1.52□□□□□ -2.17
SCFD1-216ENST00000555550 GPATCH11Q8N954 259 aa1.52□□□□□ -2.17
SCFD1-216ENST00000555550 OR1L6Q8NGR2 347 aa1.52□□□□□ -2.17
SCFD1-216ENST00000555550 PHOSPHO2Q8TCD6 241 aa1.52□□□□□ -2.17
SCFD1-216ENST00000555550 SYAP1Q96A49 352 aaPredicted RBP1.52□□□□□ -2.17
SCFD1-216ENST00000555550 GALNT14Q96FL9 552 aa1.52□□□□□ -2.17
SCFD1-216ENST00000555550 ZNF317Q96PQ6 595 aaPredicted RBP1.52□□□□□ -2.17
SCFD1-216ENST00000555550 RSG1Q9BU20 258 aa1.52□□□□□ -2.17
SCFD1-216ENST00000555550 GOLT1BQ9Y3E0 138 aa1.52□□□□□ -2.17
SCFD1-216ENST00000555550 BTBD17A6NE02 478 aa1.51□□□□□ -2.17
SCFD1-216ENST00000555550 J3QRE1 110 aa1.51□□□□□ -2.17
SCFD1-216ENST00000555550 L7N2F9 121 aa1.51□□□□□ -2.17
SCFD1-216ENST00000555550 CDC7O00311 574 aa1.51□□□□□ -2.17
SCFD1-216ENST00000555550 RDH16O75452 317 aa1.51□□□□□ -2.17
SCFD1-216ENST00000555550 SLC22A5O76082 557 aa1.51□□□□□ -2.17
SCFD1-216ENST00000555550 ATP1B2P14415 290 aaPredicted RBP1.51□□□□□ -2.17
SCFD1-216ENST00000555550 RAB3AP20336 220 aa1.51□□□□□ -2.17
SCFD1-216ENST00000555550 P2RX1P51575 399 aa1.51□□□□□ -2.17
SCFD1-216ENST00000555550 MRPS22P82650 360 aaKnown RBP1.51□□□□□ -2.17
SCFD1-216ENST00000555550 RCAN2Q14206 197 aa1.51□□□□□ -2.17
SCFD1-216ENST00000555550 RNASE13Q5GAN3 156 aaKnown RBP1.51□□□□□ -2.17
SCFD1-216ENST00000555550 TCEAL5Q5H9L2 206 aa1.51□□□□□ -2.17
SCFD1-216ENST00000555550 ANKRD26P1Q6NSI1 321 aa1.51□□□□□ -2.17
SCFD1-216ENST00000555550 PMF1Q6P1K2 205 aa1.51□□□□□ -2.17
SCFD1-216ENST00000555550 SPANXA2-OT1Q8N9U9 137 aa1.51□□□□□ -2.17
SCFD1-216ENST00000555550 TCEAL3Q969E4 200 aa1.51□□□□□ -2.17
SCFD1-216ENST00000555550 C12orf42Q96LP6 360 aa1.51□□□□□ -2.17
SCFD1-216ENST00000555550 RHOXF2Q9BQY4 288 aa1.51□□□□□ -2.17
SCFD1-216ENST00000555550 TM2D3Q9BRN9 247 aa1.51□□□□□ -2.17
SCFD1-216ENST00000555550 SLC39A3Q9BRY0 314 aa1.51□□□□□ -2.17
SCFD1-216ENST00000555550 ERP44Q9BS26 406 aa1.51□□□□□ -2.17
SCFD1-216ENST00000555550 EDA2RQ9HAV5 297 aa1.51□□□□□ -2.17
SCFD1-216ENST00000555550 NT5MQ9NPB1 228 aa1.51□□□□□ -2.17
SCFD1-216ENST00000555550 C21orf62Q9NYP8 219 aa1.51□□□□□ -2.17
SCFD1-216ENST00000555550 SIGLEC7Q9Y286 467 aa1.51□□□□□ -2.17
SCFD1-216ENST00000555550 NPTNQ9Y639 398 aa1.51□□□□□ -2.17
SCFD1-216ENST00000555550 CAMTA1Q9Y6Y1 1673 aa1.51□□□□□ -2.17
SCFD1-216ENST00000555550 C15orf38-AP3S2A0A0A6YYH1 394 aa1.5□□□□□ -2.17
SCFD1-216ENST00000555550 A0A1W2PPV9 198 aa1.5□□□□□ -2.17
SCFD1-216ENST00000555550 MANBAO00462 879 aa1.5□□□□□ -2.17
SCFD1-216ENST00000555550 EEDO75530 441 aaKnown RBP1.5□□□□□ -2.17
SCFD1-216ENST00000555550 TMEM50AO95807 157 aa1.5□□□□□ -2.17
SCFD1-216ENST00000555550 CLIC3O95833 236 aa1.5□□□□□ -2.17
SCFD1-216ENST00000555550 NDUFB10O96000 172 aa1.5□□□□□ -2.17
SCFD1-216ENST00000555550 CYB5R3P00387 301 aaPredicted RBP1.5□□□□□ -2.17
SCFD1-216ENST00000555550 IGLV3-25P01717 112 aa1.5□□□□□ -2.17
SCFD1-216ENST00000555550 ETS2P15036 469 aa1.5□□□□□ -2.17
SCFD1-216ENST00000555550 KCNJ2P63252 427 aa1.5□□□□□ -2.17
SCFD1-216ENST00000555550 CCNA1P78396 465 aa1.5□□□□□ -2.17
SCFD1-216ENST00000555550 TGFBIQ15582 683 aa1.5□□□□□ -2.17
SCFD1-216ENST00000555550 EFL1Q7Z2Z2 1120 aaKnown RBP1.5□□□□□ -2.17
SCFD1-216ENST00000555550 GMCL1P1Q8NEA9 526 aa1.5□□□□□ -2.17
SCFD1-216ENST00000555550 SDR9C7Q8NEX9 313 aa1.5□□□□□ -2.17
SCFD1-216ENST00000555550 KLF14Q8TD94 323 aaPredicted RBP1.5□□□□□ -2.17
SCFD1-216ENST00000555550 LRRC29Q8WV35 223 aa1.5□□□□□ -2.17
SCFD1-216ENST00000555550 WDR34Q96EX3 536 aa1.5□□□□□ -2.17
SCFD1-216ENST00000555550 IP6K3Q96PC2 410 aa1.5□□□□□ -2.17
SCFD1-216ENST00000555550 CWH43Q9H720 699 aa1.5□□□□□ -2.17
SCFD1-216ENST00000555550 C8orf17Q9NRJ1 99 aa1.5□□□□□ -2.17
SCFD1-216ENST00000555550 SLC7A8Q9UHI5 535 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms